RNA–Protein interactions for RNA: ENST00000333877.8

NELFA-201, Transcript of negative elongation factor complex member A, humanhuman

TSL 2

Gene NELFA, Length 2,228 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-201ENST00000333877 ZNF608Q9ULD9 1512 aaPredicted RBP28.52■■■□□ 2.16
NELFA-201ENST00000333877 GRIN2BQ13224 1484 aa28.49■■■□□ 2.15
NELFA-201ENST00000333877 FHAD1B1AJZ9 1412 aa28.47■■■□□ 2.15
NELFA-201ENST00000333877 ADAMTS12P58397 1594 aa28.45■■■□□ 2.14
NELFA-201ENST00000333877 EFCAB5A4FU69 1503 aa28.44■■■□□ 2.14
NELFA-201ENST00000333877 P3H3Q8IVL6 736 aa28.43■■■□□ 2.14
NELFA-201ENST00000333877 EIF4G3O43432 1585 aaKnown RBP28.39■■■□□ 2.14
NELFA-201ENST00000333877 KANK4Q5T7N3 995 aaPredicted RBP28.38■■■□□ 2.13
NELFA-201ENST00000333877 FHOD3Q2V2M9 1422 aa28.38■■■□□ 2.13
NELFA-201ENST00000333877 SNAPC4Q5SXM2 1469 aa28.3■■■□□ 2.12
NELFA-201ENST00000333877 SAMD9Q5K651 1589 aa28.3■■■□□ 2.12
NELFA-201ENST00000333877 PCF11O94913 1555 aaKnown RBP28.29■■■□□ 2.12
NELFA-201ENST00000333877 MAP3K1Q13233 1512 aa28.28■■■□□ 2.12
NELFA-201ENST00000333877 TIAM1Q13009 1591 aa28.27■■■□□ 2.12
NELFA-201ENST00000333877 ZEB1P37275 1124 aaPredicted RBP28.27■■■□□ 2.12
NELFA-201ENST00000333877 IQGAP2Q13576 1575 aa28.22■■■□□ 2.11
NELFA-201ENST00000333877 FMN1Q68DA7 1419 aa28.22■■■□□ 2.11
NELFA-201ENST00000333877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.21■■■□□ 2.11
NELFA-201ENST00000333877 FYCO1Q9BQS8 1478 aa28.21■■■□□ 2.11
NELFA-201ENST00000333877 CASKIN1Q8WXD9 1431 aa28.2■■■□□ 2.11
NELFA-201ENST00000333877 ATP1B4Q9UN42 357 aaPredicted RBP28.2■■■□□ 2.1
NELFA-201ENST00000333877 MAGI1Q96QZ7 1491 aaPredicted RBP28.19■■■□□ 2.1
NELFA-201ENST00000333877 CFAP43Q8NDM7 1665 aa28.17■■■□□ 2.1
NELFA-201ENST00000333877 HNRNPUL2Q1KMD3 747 aaKnown RBP28.17■■■□□ 2.1
NELFA-201ENST00000333877 GRIN2AQ12879 1464 aa28.16■■■□□ 2.1
NELFA-201ENST00000333877 LRRC9Q6ZRR7 1453 aa28.14■■■□□ 2.1
NELFA-201ENST00000333877 CCER1Q8TC90 406 aaPredicted RBP28.13■■■□□ 2.09
NELFA-201ENST00000333877 SYNJ2O15056 1496 aa28.11■■■□□ 2.09
NELFA-201ENST00000333877 KIAA0586Q9BVV6 1533 aa28.09■■■□□ 2.09
NELFA-201ENST00000333877 RRBP1Q9P2E9 1410 aaKnown RBP28.09■■■□□ 2.09
NELFA-201ENST00000333877 CHMP7Q8WUX9 453 aaPredicted RBP28.08■■■□□ 2.09
NELFA-201ENST00000333877 UGGT2Q9NYU1 1516 aa28.07■■■□□ 2.08
NELFA-201ENST00000333877 FBLN2P98095 1184 aa28.03■■■□□ 2.08
NELFA-201ENST00000333877 CCNB3Q8WWL7 1395 aa28■■■□□ 2.07
NELFA-201ENST00000333877 CEP170Q5SW79 1584 aa27.99■■■□□ 2.07
NELFA-201ENST00000333877 LRRIQ1Q96JM4 1722 aa27.98■■■□□ 2.07
NELFA-201ENST00000333877 PHLDB1Q86UU1 1377 aa27.94■■■□□ 2.06
NELFA-201ENST00000333877 DISP1Q96F81 1524 aa27.94■■■□□ 2.06
NELFA-201ENST00000333877 KIAA0556O60303 1618 aa27.93■■■□□ 2.06
NELFA-201ENST00000333877 NUP160Q12769 1436 aa27.91■■■□□ 2.06
NELFA-201ENST00000333877 HECW1Q76N89 1606 aa27.88■■■□□ 2.05
NELFA-201ENST00000333877 MTUS2Q5JR59 1369 aa27.88■■■□□ 2.05
NELFA-201ENST00000333877 CCDC18Q5T9S5 1454 aa27.85■■■□□ 2.05
NELFA-201ENST00000333877 ITGAEP38570 1179 aa27.8■■■□□ 2.04
NELFA-201ENST00000333877 EPRSP07814 1512 aaKnown RBP27.79■■■□□ 2.04
NELFA-201ENST00000333877 JPH4Q96JJ6 628 aa27.79■■■□□ 2.04
NELFA-201ENST00000333877 EHBP1L1Q8N3D4 1523 aa27.78■■■□□ 2.04
NELFA-201ENST00000333877 FAM50AQ14320 339 aaKnown RBP27.76■■■□□ 2.03
NELFA-201ENST00000333877 MAGI3Q5TCQ9 1506 aa27.74■■■□□ 2.03
NELFA-201ENST00000333877 SUPT6HQ7KZ85 1726 aaKnown RBP27.74■■■□□ 2.03
NELFA-201ENST00000333877 CARMIL2Q6F5E8 1435 aa27.74■■■□□ 2.03
NELFA-201ENST00000333877 CDK13Q14004 1512 aaKnown RBP27.73■■■□□ 2.03
NELFA-201ENST00000333877 NCOA2Q15596 1464 aa27.73■■■□□ 2.03
NELFA-201ENST00000333877 CHD1O14646 1710 aa27.73■■■□□ 2.03
NELFA-201ENST00000333877 RAPGEF6Q8TEU7 1601 aa27.71■■■□□ 2.03
NELFA-201ENST00000333877 ARID3CA6NKF2 412 aa27.7■■■□□ 2.02
NELFA-201ENST00000333877 FGD6Q6ZV73 1430 aa27.69■■■□□ 2.02
NELFA-201ENST00000333877 NUP153P49790 1475 aaKnown RBP27.67■■■□□ 2.02
NELFA-201ENST00000333877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.67■■■□□ 2.024e-7■■■■■ 33.5
NELFA-201ENST00000333877 MYOM3Q5VTT5 1437 aa27.64■■■□□ 2.02
NELFA-201ENST00000333877 ARHGEF11O15085 1522 aa27.64■■■□□ 2.02
NELFA-201ENST00000333877 PLB1Q6P1J6 1458 aa27.61■■■□□ 2.01
NELFA-201ENST00000333877 DHX57Q6P158 1386 aaKnown RBP27.59■■■□□ 2.01
NELFA-201ENST00000333877 PRG4Q92954 1404 aaPredicted RBP27.56■■■□□ 2
NELFA-201ENST00000333877 RAB3GAP2Q9H2M9 1393 aa27.55■■■□□ 2
NELFA-201ENST00000333877 SETD5Q9C0A6 1442 aa27.54■■■□□ 2
NELFA-201ENST00000333877 CDK11AQ9UQ88 783 aaPredicted RBP27.52■■■□□ 2
NELFA-201ENST00000333877 PTPN23Q9H3S7 1636 aa27.52■■■□□ 2
NELFA-201ENST00000333877 CLSPNQ9HAW4 1339 aa27.49■■□□□ 1.99
NELFA-201ENST00000333877 ABCA8O94911 1581 aa27.49■■□□□ 1.99
NELFA-201ENST00000333877 SHROOM2Q13796 1616 aa27.48■■□□□ 1.99
NELFA-201ENST00000333877 TCOF1Q13428 1488 aaKnown RBP27.44■■□□□ 1.98
NELFA-201ENST00000333877 PTPRGP23470 1445 aa27.44■■□□□ 1.98
NELFA-201ENST00000333877 PTPRKQ15262 1439 aa27.43■■□□□ 1.98
NELFA-201ENST00000333877 MIA2Q96PC5 1412 aa27.43■■□□□ 1.98
NELFA-201ENST00000333877 TROQ12816 1431 aaPredicted RBP27.42■■□□□ 1.98
NELFA-201ENST00000333877 ATP10BO94823 1461 aa27.36■■□□□ 1.97
NELFA-201ENST00000333877 CLASP1Q7Z460 1538 aa27.35■■□□□ 1.97
NELFA-201ENST00000333877 ERCC6L2Q5T890 1561 aa27.33■■□□□ 1.97
NELFA-201ENST00000333877 ADCY10Q96PN6 1610 aa27.33■■□□□ 1.97
NELFA-201ENST00000333877 HFM1A2PYH4 1435 aa27.32■■□□□ 1.96
NELFA-201ENST00000333877 KIF14Q15058 1648 aa27.31■■□□□ 1.96
NELFA-201ENST00000333877 PLEKHD1A6NEE1 506 aa27.3■■□□□ 1.96
NELFA-201ENST00000333877 MAPKBP1O60336 1514 aa27.27■■□□□ 1.96
NELFA-201ENST00000333877 UACAQ9BZF9 1416 aa27.27■■□□□ 1.96
NELFA-201ENST00000333877 NAIPQ13075 1403 aa27.26■■□□□ 1.95
NELFA-201ENST00000333877 ITSN2Q9NZM3 1697 aa27.24■■□□□ 1.95
NELFA-201ENST00000333877 CHIC2Q9UKJ5 165 aa27.24■■□□□ 1.95
NELFA-201ENST00000333877 GPATCH8Q9UKJ3 1502 aaKnown RBP27.22■■□□□ 1.95
NELFA-201ENST00000333877 ZNF644Q9H582 1327 aaPredicted RBP27.22■■□□□ 1.95
NELFA-201ENST00000333877 CFDP1Q9UEE9 299 aaPredicted RBP27.2■■□□□ 1.95
NELFA-201ENST00000333877 RRP7BPQ9NSQ0 103 aa27.19■■□□□ 1.94
NELFA-201ENST00000333877 DAPK1P53355 1430 aa27.18■■□□□ 1.94
NELFA-201ENST00000333877 DNMT1P26358 1616 aaKnown RBP27.17■■□□□ 1.94
NELFA-201ENST00000333877 GCC2Q8IWJ2 1684 aa27.17■■□□□ 1.94
NELFA-201ENST00000333877 AKNAQ7Z591 1439 aa27.16■■□□□ 1.94
NELFA-201ENST00000333877 ABCC2Q92887 1545 aa27.16■■□□□ 1.94
NELFA-201ENST00000333877 ABCC10Q5T3U5 1492 aa27.16■■□□□ 1.94
NELFA-201ENST00000333877 CAMSAP2Q08AD1 1489 aa27.15■■□□□ 1.94
NELFA-201ENST00000333877 ABCC5O15440 1437 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms