RNA–Protein interactions for RNA: ENST00000333535.8

SCN5A-202, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SCN5A, Length 8,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-202ENST00000333535 ERICH6BQ5W0A0 696 aa15.44■□□□□ 0.06
SCN5A-202ENST00000333535 ZRSR1Q15695 479 aaKnown RBP15.44■□□□□ 0.06
SCN5A-202ENST00000333535 EEA1Q15075 1411 aa15.43■□□□□ 0.06
SCN5A-202ENST00000333535 EIF4G2P78344 907 aaKnown RBP eCLIP15.42■□□□□ 0.06
SCN5A-202ENST00000333535 CDCA8Q53HL2 280 aa15.42■□□□□ 0.06
SCN5A-202ENST00000333535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.41■□□□□ 0.06
SCN5A-202ENST00000333535 ARXQ96QS3 562 aa15.41■□□□□ 0.06
SCN5A-202ENST00000333535 PPM1GO15355 546 aaPredicted RBP15.4■□□□□ 0.06
SCN5A-202ENST00000333535 SALL2Q9Y467 1007 aaPredicted RBP15.39■□□□□ 0.05
SCN5A-202ENST00000333535 GOLGA3Q08378 1498 aa15.36■□□□□ 0.05
SCN5A-202ENST00000333535 NACADO15069 1562 aa15.36■□□□□ 0.05
SCN5A-202ENST00000333535 CHMP4BQ9H444 224 aaKnown RBP15.36■□□□□ 0.05
SCN5A-202ENST00000333535 CLIP1P30622 1438 aa15.36■□□□□ 0.05
SCN5A-202ENST00000333535 PTMAP06454 111 aaKnown RBP15.35■□□□□ 0.05
SCN5A-202ENST00000333535 GOLGA6L6A8MZA4 724 aa15.35■□□□□ 0.05
SCN5A-202ENST00000333535 CFAP53Q96M91 514 aa15.35■□□□□ 0.05
SCN5A-202ENST00000333535 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
SCN5A-202ENST00000333535 DNTTIP2Q5QJE6 756 aaKnown RBP15.33■□□□□ 0.05
SCN5A-202ENST00000333535 KDM2AQ9Y2K7 1162 aa15.33■□□□□ 0.04
SCN5A-202ENST00000333535 CHMP7Q8WUX9 453 aaPredicted RBP15.33■□□□□ 0.04
SCN5A-202ENST00000333535 CHIC2Q9UKJ5 165 aa15.3■□□□□ 0.04
SCN5A-202ENST00000333535 FTSJ3Q8IY81 847 aaKnown RBP15.3■□□□□ 0.04
SCN5A-202ENST00000333535 NRDCO43847 1150 aa15.29■□□□□ 0.04
SCN5A-202ENST00000333535 PLPPR3Q6T4P5 718 aa15.29■□□□□ 0.04
SCN5A-202ENST00000333535 MIER1Q8N108 512 aa15.29■□□□□ 0.04
SCN5A-202ENST00000333535 PPP1R15AO75807 674 aaPredicted RBP15.28■□□□□ 0.04
SCN5A-202ENST00000333535 MS4A1P11836 297 aa15.28■□□□□ 0.04
SCN5A-202ENST00000333535 PNNQ9H307 717 aaKnown RBP15.28■□□□□ 0.04
SCN5A-202ENST00000333535 KNSTRNQ9Y448 316 aa15.26■□□□□ 0.03
SCN5A-202ENST00000333535 CFAP44Q96MT7 982 aa15.26■□□□□ 0.03
SCN5A-202ENST00000333535 CHAF1AQ13111 956 aaPredicted RBP15.25■□□□□ 0.03
SCN5A-202ENST00000333535 C14orf37Q86TY3 774 aa15.21■□□□□ 0.03
SCN5A-202ENST00000333535 NAP1L5Q96NT1 182 aaPredicted RBP15.2■□□□□ 0.02
SCN5A-202ENST00000333535 NOP58Q9Y2X3 529 aaKnown RBP15.2■□□□□ 0.02
SCN5A-202ENST00000333535 A0A0G2JS52 829 aa15.2■□□□□ 0.02
SCN5A-202ENST00000333535 PPP4R2Q9NY27 417 aa15.2■□□□□ 0.02
SCN5A-202ENST00000333535 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
SCN5A-202ENST00000333535 PLEKHD1A6NEE1 506 aa15.2■□□□□ 0.02
SCN5A-202ENST00000333535 CEP162Q5TB80 1403 aa15.2■□□□□ 0.02
SCN5A-202ENST00000333535 IRX6P78412 446 aaPredicted RBP15.2■□□□□ 0.02
SCN5A-202ENST00000333535 PTMSP20962 102 aa15.19■□□□□ 0.02
SCN5A-202ENST00000333535 BAZ1BQ9UIG0 1483 aaKnown RBP15.19■□□□□ 0.02
SCN5A-202ENST00000333535 L1TD1Q5T7N2 865 aaKnown RBP15.19■□□□□ 0.02
SCN5A-202ENST00000333535 KIF27Q86VH2 1401 aa15.19■□□□□ 0.02
SCN5A-202ENST00000333535 NUDCQ9Y266 331 aa15.17■□□□□ 0.02
SCN5A-202ENST00000333535 HAP1P54257 671 aaPredicted RBP15.16■□□□□ 0.02
SCN5A-202ENST00000333535 FHAD1B1AJZ9 1412 aa15.16■□□□□ 0.02
SCN5A-202ENST00000333535 HSP90AB1P08238 724 aaKnown RBP15.16■□□□□ 0.02
SCN5A-202ENST00000333535 MAPK8IP3Q9UPT6 1336 aa15.16■□□□□ 0.02
SCN5A-202ENST00000333535 MSNP26038 577 aaKnown RBP15.13■□□□□ 0.01
SCN5A-202ENST00000333535 SUPT16HQ9Y5B9 1047 aaKnown RBP15.13■□□□□ 0.01
SCN5A-202ENST00000333535 RRP7BPQ9NSQ0 103 aa15.11■□□□□ 0.01
SCN5A-202ENST00000333535 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
SCN5A-202ENST00000333535 ZBTB7CA1YPR0 619 aa15.1■□□□□ 0.01
SCN5A-202ENST00000333535 HSCBQ8IWL3 235 aa15.1■□□□□ 0.01
SCN5A-202ENST00000333535 KANK1Q14678 1352 aa15.09■□□□□ 0.01
SCN5A-202ENST00000333535 MCCP23508 829 aa15.09■□□□□ 0.01
SCN5A-202ENST00000333535 CFDP1Q9UEE9 299 aaPredicted RBP15.08■□□□□ 0
SCN5A-202ENST00000333535 CARD11Q9BXL7 1154 aa15.07■□□□□ 0
SCN5A-202ENST00000333535 WRNQ14191 1432 aaPredicted RBP eCLIP15.06■□□□□ 0
SCN5A-202ENST00000333535 FGD1P98174 961 aa15.06■□□□□ 0
SCN5A-202ENST00000333535 ERCC6Q03468 1493 aa15.06■□□□□ 0
SCN5A-202ENST00000333535 GOLGA2Q08379 1002 aa15.06■□□□□ 0
SCN5A-202ENST00000333535 HDGFP51858 240 aaKnown RBP15.05■□□□□ -0
SCN5A-202ENST00000333535 GOLGA6L4A6NEF3 574 aa15.05■□□□□ -0
SCN5A-202ENST00000333535 NPHP1O15259 732 aa15.05■□□□□ -0
SCN5A-202ENST00000333535 ARID4BQ4LE39 1312 aaPredicted RBP15.05■□□□□ -0
SCN5A-202ENST00000333535 TNIKQ9UKE5 1360 aa15.04■□□□□ -0
SCN5A-202ENST00000333535 KCNJ4P48050 445 aa15.03■□□□□ -0
SCN5A-202ENST00000333535 OS9Q13438 667 aaPredicted RBP15.03■□□□□ -0
SCN5A-202ENST00000333535 KCNH8Q96L42 1107 aa15.03■□□□□ -0
SCN5A-202ENST00000333535 POGKQ9P215 609 aa15.02■□□□□ -0
SCN5A-202ENST00000333535 TIMELESSQ9UNS1 1208 aa15.02■□□□□ -0
SCN5A-202ENST00000333535 RGL3Q3MIN7 710 aa15.02□□□□□ -0.01
SCN5A-202ENST00000333535 HIRIP3Q9BW71 556 aaPredicted RBP15.02□□□□□ -0.01
SCN5A-202ENST00000333535 PLCB2Q00722 1185 aa15□□□□□ -0.01
SCN5A-202ENST00000333535 LAS1LQ9Y4W2 734 aaKnown RBP15□□□□□ -0.01
SCN5A-202ENST00000333535 MYO15BQ96JP2 1530 aa14.99□□□□□ -0.01
SCN5A-202ENST00000333535 CCER2I3L3R5 266 aa14.98□□□□□ -0.01
SCN5A-202ENST00000333535 TMF1P82094 1093 aa14.98□□□□□ -0.01
SCN5A-202ENST00000333535 GBP4Q96PP9 640 aa14.98□□□□□ -0.01
SCN5A-202ENST00000333535 SYAP1Q96A49 352 aaPredicted RBP14.97□□□□□ -0.01
SCN5A-202ENST00000333535 DRC7Q8IY82 874 aa14.97□□□□□ -0.01
SCN5A-202ENST00000333535 USP35Q9P2H5 1018 aa14.97□□□□□ -0.01
SCN5A-202ENST00000333535 RGS3P49796 1198 aa14.97□□□□□ -0.01
SCN5A-202ENST00000333535 KIAA2012Q0VF49 1180 aa14.97□□□□□ -0.01
SCN5A-202ENST00000333535 CHMP4AQ9BY43 222 aa14.96□□□□□ -0.01
SCN5A-202ENST00000333535 EIF4G1Q04637 1599 aaKnown RBP14.95□□□□□ -0.02
SCN5A-202ENST00000333535 CCNB3Q8WWL7 1395 aa14.95□□□□□ -0.02
SCN5A-202ENST00000333535 CALD1Q05682 793 aaKnown RBP14.94□□□□□ -0.02
SCN5A-202ENST00000333535 ARHGAP35Q9NRY4 1499 aa14.94□□□□□ -0.02
SCN5A-202ENST00000333535 HTATSF1O43719 755 aaKnown RBP14.94□□□□□ -0.02
SCN5A-202ENST00000333535 FRAT1Q92837 279 aaPredicted RBP14.94□□□□□ -0.02
SCN5A-202ENST00000333535 KAT6BQ8WYB5 2073 aa14.92□□□□□ -0.02
SCN5A-202ENST00000333535 IPO8O15397 1037 aaKnown RBP14.92□□□□□ -0.02
SCN5A-202ENST00000333535 TULP1O00294 542 aaPredicted RBP14.91□□□□□ -0.02
SCN5A-202ENST00000333535 PLEKHG5O94827 1062 aa14.9□□□□□ -0.02
SCN5A-202ENST00000333535 DEKP35659 375 aaKnown RBP14.9□□□□□ -0.02
SCN5A-202ENST00000333535 TPRNQ4KMQ1 711 aa14.9□□□□□ -0.02
SCN5A-202ENST00000333535 NAP1L2Q9ULW6 460 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms