RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 CCDC180Q9P1Z9 1646 aa21.99■■□□□ 1.11
NSMCE3-201ENST00000332303 KCNH8Q96L42 1107 aa21.99■■□□□ 1.11
NSMCE3-201ENST00000332303 MYH16Q9H6N6 1097 aa21.98■■□□□ 1.11
NSMCE3-201ENST00000332303 EIF5BO60841 1220 aaKnown RBP21.96■■□□□ 1.11
NSMCE3-201ENST00000332303 WRNQ14191 1432 aaPredicted RBP eCLIP21.95■■□□□ 1.1
NSMCE3-201ENST00000332303 PPP1R15AO75807 674 aaPredicted RBP21.93■■□□□ 1.1
NSMCE3-201ENST00000332303 IRX6P78412 446 aaPredicted RBP21.93■■□□□ 1.1
NSMCE3-201ENST00000332303 RGL3Q3MIN7 710 aa21.93■■□□□ 1.1
NSMCE3-201ENST00000332303 CFDP1Q9UEE9 299 aaPredicted RBP21.92■■□□□ 1.1
NSMCE3-201ENST00000332303 CDCA8Q53HL2 280 aa21.91■■□□□ 1.1
NSMCE3-201ENST00000332303 RB1CC1Q8TDY2 1594 aa21.91■■□□□ 1.1
NSMCE3-201ENST00000332303 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
NSMCE3-201ENST00000332303 NBR1Q14596 966 aa21.88■■□□□ 1.09
NSMCE3-201ENST00000332303 TNIKQ9UKE5 1360 aa21.87■■□□□ 1.09
NSMCE3-201ENST00000332303 SCAF1Q9H7N4 1312 aaKnown RBP21.87■■□□□ 1.09
NSMCE3-201ENST00000332303 CFAP53Q96M91 514 aa21.86■■□□□ 1.09
NSMCE3-201ENST00000332303 KNSTRNQ9Y448 316 aa21.83■■□□□ 1.09
NSMCE3-201ENST00000332303 CEP164Q9UPV0 1460 aa21.81■■□□□ 1.08
NSMCE3-201ENST00000332303 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
NSMCE3-201ENST00000332303 CARD11Q9BXL7 1154 aa21.8■■□□□ 1.08
NSMCE3-201ENST00000332303 C14orf37Q86TY3 774 aa21.8■■□□□ 1.08
NSMCE3-201ENST00000332303 BECN1Q14457 450 aa21.78■■□□□ 1.08
NSMCE3-201ENST00000332303 SENP3Q9H4L4 574 aaPredicted RBP21.77■■□□□ 1.08
NSMCE3-201ENST00000332303 ARXQ96QS3 562 aa21.76■■□□□ 1.07
NSMCE3-201ENST00000332303 DDRGK1Q96HY6 314 aa21.75■■□□□ 1.07
NSMCE3-201ENST00000332303 A0A0G2JS52 829 aa21.75■■□□□ 1.07
NSMCE3-201ENST00000332303 MYO15BQ96JP2 1530 aa21.74■■□□□ 1.07
NSMCE3-201ENST00000332303 ZBTB7CA1YPR0 619 aa21.73■■□□□ 1.07
NSMCE3-201ENST00000332303 NACADO15069 1562 aa21.7■■□□□ 1.06
NSMCE3-201ENST00000332303 ANP32EQ9BTT0 268 aa21.69■■□□□ 1.06
NSMCE3-201ENST00000332303 PLEKHG5O94827 1062 aa21.69■■□□□ 1.06
NSMCE3-201ENST00000332303 GLIPR1L2Q4G1C9 344 aa21.67■■□□□ 1.06
NSMCE3-201ENST00000332303 PPM1GO15355 546 aaPredicted RBP21.66■■□□□ 1.06
NSMCE3-201ENST00000332303 SUPT16HQ9Y5B9 1047 aaKnown RBP21.66■■□□□ 1.06
NSMCE3-201ENST00000332303 NUDCQ9Y266 331 aa21.66■■□□□ 1.06
NSMCE3-201ENST00000332303 SIN3AQ96ST3 1273 aa21.66■■□□□ 1.06
NSMCE3-201ENST00000332303 GOLGA6L22H0YM25 854 aa21.66■■□□□ 1.06
NSMCE3-201ENST00000332303 ARID4BQ4LE39 1312 aaPredicted RBP21.65■■□□□ 1.06
NSMCE3-201ENST00000332303 NCLP19338 710 aaKnown RBP21.65■■□□□ 1.06
NSMCE3-201ENST00000332303 FTSJ3Q8IY81 847 aaKnown RBP21.63■■□□□ 1.05
NSMCE3-201ENST00000332303 MAPK8IP3Q9UPT6 1336 aa21.63■■□□□ 1.05
NSMCE3-201ENST00000332303 SENP3-EIF4A1A0A087X0R7 540 aa21.61■■□□□ 1.05
NSMCE3-201ENST00000332303 FHAD1B1AJZ9 1412 aa21.61■■□□□ 1.05
NSMCE3-201ENST00000332303 NEUROD2Q15784 382 aa21.61■■□□□ 1.05
NSMCE3-201ENST00000332303 POGKQ9P215 609 aa21.6■■□□□ 1.05
NSMCE3-201ENST00000332303 TIMELESSQ9UNS1 1208 aa21.59■■□□□ 1.05
NSMCE3-201ENST00000332303 CCNB3Q8WWL7 1395 aa21.59■■□□□ 1.05
NSMCE3-201ENST00000332303 HAP1P54257 671 aaPredicted RBP21.58■■□□□ 1.04
NSMCE3-201ENST00000332303 PPP4R2Q9NY27 417 aa21.55■■□□□ 1.04
NSMCE3-201ENST00000332303 CASC1Q6TDU7 716 aa21.54■■□□□ 1.04
NSMCE3-201ENST00000332303 TRIM44Q96DX7 344 aaPredicted RBP21.54■■□□□ 1.04
NSMCE3-201ENST00000332303 BAZ1AQ9NRL2 1556 aaPredicted RBP21.54■■□□□ 1.04
NSMCE3-201ENST00000332303 CDK11BP21127 795 aaKnown RBP21.54■■□□□ 1.04
NSMCE3-201ENST00000332303 CARMIL1Q5VZK9 1371 aa21.53■■□□□ 1.04
NSMCE3-201ENST00000332303 CHMP4BQ9H444 224 aaKnown RBP21.53■■□□□ 1.04
NSMCE3-201ENST00000332303 MS4A1P11836 297 aa21.5■■□□□ 1.03
NSMCE3-201ENST00000332303 LAS1LQ9Y4W2 734 aaKnown RBP21.5■■□□□ 1.03
NSMCE3-201ENST00000332303 TMF1P82094 1093 aa21.5■■□□□ 1.03
NSMCE3-201ENST00000332303 DCAF11Q8TEB1 546 aa21.48■■□□□ 1.03
NSMCE3-201ENST00000332303 FRAT1Q92837 279 aaPredicted RBP21.48■■□□□ 1.03
NSMCE3-201ENST00000332303 ERCC6Q03468 1493 aa21.47■■□□□ 1.03
NSMCE3-201ENST00000332303 TNNT2P45379 298 aaPredicted RBP21.46■■□□□ 1.03
NSMCE3-201ENST00000332303 CC2D1BQ5T0F9 858 aaKnown RBP21.46■■□□□ 1.03
NSMCE3-201ENST00000332303 RGS3P49796 1198 aa21.45■■□□□ 1.03
NSMCE3-201ENST00000332303 PNNQ9H307 717 aaKnown RBP21.45■■□□□ 1.02
NSMCE3-201ENST00000332303 U2SURPO15042 1029 aaKnown RBP21.45■■□□□ 1.02
NSMCE3-201ENST00000332303 ZRSR1Q15695 479 aaKnown RBP21.44■■□□□ 1.02
NSMCE3-201ENST00000332303 LMOD2Q6P5Q4 547 aa21.44■■□□□ 1.02
NSMCE3-201ENST00000332303 CUX2O14529 1486 aa21.44■■□□□ 1.02
NSMCE3-201ENST00000332303 KANK1Q14678 1352 aa21.42■■□□□ 1.02
NSMCE3-201ENST00000332303 CECR2Q9BXF3 1484 aa21.4■■□□□ 1.02
NSMCE3-201ENST00000332303 SOGA1O94964 1423 aa21.38■■□□□ 1.01
NSMCE3-201ENST00000332303 HDGFP51858 240 aaKnown RBP21.38■■□□□ 1.01
NSMCE3-201ENST00000332303 CCER2I3L3R5 266 aa21.37■■□□□ 1.01
NSMCE3-201ENST00000332303 PTMAP06454 111 aaKnown RBP21.37■■□□□ 1.01
NSMCE3-201ENST00000332303 SETD5Q9C0A6 1442 aa21.34■■□□□ 1.01
NSMCE3-201ENST00000332303 VPS8Q8N3P4 1428 aa21.34■■□□□ 1.01
NSMCE3-201ENST00000332303 B4GALNT3Q6L9W6 998 aa21.32■■□□□ 1
NSMCE3-201ENST00000332303 SRPK2P78362 688 aaKnown RBP21.32■■□□□ 1
NSMCE3-201ENST00000332303 OS9Q13438 667 aaPredicted RBP21.31■■□□□ 1
NSMCE3-201ENST00000332303 ERICH6BQ5W0A0 696 aa21.31■■□□□ 1
NSMCE3-201ENST00000332303 MORC1Q86VD1 984 aa21.31■■□□□ 1
NSMCE3-201ENST00000332303 PKD2Q13563 968 aa21.3■■□□□ 1
NSMCE3-201ENST00000332303 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
NSMCE3-201ENST00000332303 HSPA5P11021 654 aaKnown RBP21.29■■□□□ 1
NSMCE3-201ENST00000332303 ARHGAP35Q9NRY4 1499 aa21.27■■□□□ 1
NSMCE3-201ENST00000332303 FGD1P98174 961 aa21.27■■□□□ 1
NSMCE3-201ENST00000332303 NOP58Q9Y2X3 529 aaKnown RBP21.27■■□□□ 1
NSMCE3-201ENST00000332303 HSP90AB1P08238 724 aaKnown RBP21.25■□□□□ 0.99
NSMCE3-201ENST00000332303 KCNJ4P48050 445 aa21.25■□□□□ 0.99
NSMCE3-201ENST00000332303 GGT6Q6P531 493 aa21.25■□□□□ 0.99
NSMCE3-201ENST00000332303 MLECQ14165 292 aa21.24■□□□□ 0.99
NSMCE3-201ENST00000332303 DNTTIP2Q5QJE6 756 aaKnown RBP21.23■□□□□ 0.99
NSMCE3-201ENST00000332303 KANK4Q5T7N3 995 aaPredicted RBP21.23■□□□□ 0.99
NSMCE3-201ENST00000332303 CARMIL2Q6F5E8 1435 aa21.23■□□□□ 0.99
NSMCE3-201ENST00000332303 TPRNQ4KMQ1 711 aa21.22■□□□□ 0.99
NSMCE3-201ENST00000332303 SAFB2Q14151 953 aaKnown RBP eCLIP21.21■□□□□ 0.99
NSMCE3-201ENST00000332303 KTN1Q86UP2 1357 aaKnown RBP21.21■□□□□ 0.99
NSMCE3-201ENST00000332303 NPHP1O15259 732 aa21.2■□□□□ 0.98
NSMCE3-201ENST00000332303 SOX12O15370 315 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 229.1 ms