RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 AQRO60306 1485 aaKnown RBP eCLIP21.33■■□□□ 1.016e-9■■■■■ 45.1
TRAIP-201ENST00000331456 GRIN2BQ13224 1484 aa21.32■■□□□ 1
TRAIP-201ENST00000331456 FHAD1B1AJZ9 1412 aa21.32■■□□□ 1
TRAIP-201ENST00000331456 THOC2Q8NI27 1593 aaKnown RBP21.32■■□□□ 1
TRAIP-201ENST00000331456 ADAMTS12P58397 1594 aa21.27■■□□□ 1
TRAIP-201ENST00000331456 MAP3K1Q13233 1512 aa21.26■□□□□ 0.99
TRAIP-201ENST00000331456 ZNF608Q9ULD9 1512 aaPredicted RBP21.25■□□□□ 0.99
TRAIP-201ENST00000331456 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
TRAIP-201ENST00000331456 KANK4Q5T7N3 995 aaPredicted RBP21.22■□□□□ 0.99
TRAIP-201ENST00000331456 FHOD3Q2V2M9 1422 aa21.22■□□□□ 0.99
TRAIP-201ENST00000331456 TIAM1Q13009 1591 aa21.2■□□□□ 0.98
TRAIP-201ENST00000331456 EIF4G3O43432 1585 aaKnown RBP21.19■□□□□ 0.98
TRAIP-201ENST00000331456 SAMD9Q5K651 1589 aa21.19■□□□□ 0.98
TRAIP-201ENST00000331456 FMN1Q68DA7 1419 aa21.18■□□□□ 0.98
TRAIP-201ENST00000331456 PCF11O94913 1555 aaKnown RBP21.18■□□□□ 0.98
TRAIP-201ENST00000331456 CCER1Q8TC90 406 aaPredicted RBP21.17■□□□□ 0.98
TRAIP-201ENST00000331456 FYCO1Q9BQS8 1478 aa21.17■□□□□ 0.98
TRAIP-201ENST00000331456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.16■□□□□ 0.98
TRAIP-201ENST00000331456 CASKIN1Q8WXD9 1431 aa21.15■□□□□ 0.98
TRAIP-201ENST00000331456 SNAPC4Q5SXM2 1469 aa21.13■□□□□ 0.97
TRAIP-201ENST00000331456 IQGAP2Q13576 1575 aa21.13■□□□□ 0.97
TRAIP-201ENST00000331456 CFAP43Q8NDM7 1665 aa21.13■□□□□ 0.97
TRAIP-201ENST00000331456 HNRNPUL2Q1KMD3 747 aaKnown RBP21.12■□□□□ 0.97
TRAIP-201ENST00000331456 LRRC9Q6ZRR7 1453 aa21.1■□□□□ 0.97
TRAIP-201ENST00000331456 MAGI1Q96QZ7 1491 aaPredicted RBP21.1■□□□□ 0.97
TRAIP-201ENST00000331456 ATP1B4Q9UN42 357 aaPredicted RBP21.1■□□□□ 0.97
TRAIP-201ENST00000331456 RRBP1Q9P2E9 1410 aaKnown RBP21.09■□□□□ 0.97
TRAIP-201ENST00000331456 GRIN2AQ12879 1464 aa21.06■□□□□ 0.96
TRAIP-201ENST00000331456 KIAA0586Q9BVV6 1533 aa21.03■□□□□ 0.96
TRAIP-201ENST00000331456 SYNJ2O15056 1496 aa21.02■□□□□ 0.96
TRAIP-201ENST00000331456 CCNB3Q8WWL7 1395 aa21.02■□□□□ 0.96
TRAIP-201ENST00000331456 UGGT2Q9NYU1 1516 aa21.01■□□□□ 0.95
TRAIP-201ENST00000331456 CHMP7Q8WUX9 453 aaPredicted RBP21■□□□□ 0.95
TRAIP-201ENST00000331456 PHLDB1Q86UU1 1377 aa20.92■□□□□ 0.94
TRAIP-201ENST00000331456 CCDC18Q5T9S5 1454 aa20.92■□□□□ 0.94
TRAIP-201ENST00000331456 MTUS2Q5JR59 1369 aa20.91■□□□□ 0.94
TRAIP-201ENST00000331456 HECW1Q76N89 1606 aa20.91■□□□□ 0.94
TRAIP-201ENST00000331456 FBLN2P98095 1184 aa20.9■□□□□ 0.94
TRAIP-201ENST00000331456 KIAA0556O60303 1618 aa20.9■□□□□ 0.94
TRAIP-201ENST00000331456 CEP170Q5SW79 1584 aa20.89■□□□□ 0.94
TRAIP-201ENST00000331456 LRRIQ1Q96JM4 1722 aa20.88■□□□□ 0.93
TRAIP-201ENST00000331456 NUP160Q12769 1436 aa20.87■□□□□ 0.93
TRAIP-201ENST00000331456 DISP1Q96F81 1524 aa20.87■□□□□ 0.93
TRAIP-201ENST00000331456 EHBP1L1Q8N3D4 1523 aa20.85■□□□□ 0.93
TRAIP-201ENST00000331456 ITGAEP38570 1179 aa20.81■□□□□ 0.92
TRAIP-201ENST00000331456 FAM50AQ14320 339 aaKnown RBP20.81■□□□□ 0.92
TRAIP-201ENST00000331456 EPRSP07814 1512 aaKnown RBP20.81■□□□□ 0.92
TRAIP-201ENST00000331456 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.81■□□□□ 0.92
TRAIP-201ENST00000331456 SUPT6HQ7KZ85 1726 aaKnown RBP20.81■□□□□ 0.92
TRAIP-201ENST00000331456 CARMIL2Q6F5E8 1435 aa20.8■□□□□ 0.92
TRAIP-201ENST00000331456 NCOA2Q15596 1464 aa20.77■□□□□ 0.92
TRAIP-201ENST00000331456 FGD6Q6ZV73 1430 aa20.77■□□□□ 0.91
TRAIP-201ENST00000331456 JPH4Q96JJ6 628 aa20.77■□□□□ 0.91
TRAIP-201ENST00000331456 RAPGEF6Q8TEU7 1601 aa20.75■□□□□ 0.91
TRAIP-201ENST00000331456 CLSPNQ9HAW4 1339 aa20.75■□□□□ 0.91
TRAIP-201ENST00000331456 MYOM3Q5VTT5 1437 aa20.73■□□□□ 0.91
TRAIP-201ENST00000331456 MAGI3Q5TCQ9 1506 aa20.72■□□□□ 0.91
TRAIP-201ENST00000331456 CDK13Q14004 1512 aaKnown RBP20.72■□□□□ 0.91
TRAIP-201ENST00000331456 DHX57Q6P158 1386 aaKnown RBP20.71■□□□□ 0.91
TRAIP-201ENST00000331456 ARHGEF11O15085 1522 aa20.71■□□□□ 0.91
TRAIP-201ENST00000331456 SETD5Q9C0A6 1442 aa20.69■□□□□ 0.9
TRAIP-201ENST00000331456 DNAJC5Q9H3Z4 198 aa20.69■□□□□ 0.9
TRAIP-201ENST00000331456 NUP153P49790 1475 aaKnown RBP20.69■□□□□ 0.9
TRAIP-201ENST00000331456 CDK11AQ9UQ88 783 aaPredicted RBP20.67■□□□□ 0.9
TRAIP-201ENST00000331456 CHD1O14646 1710 aa20.67■□□□□ 0.9
TRAIP-201ENST00000331456 RAB3GAP2Q9H2M9 1393 aa20.66■□□□□ 0.9
TRAIP-201ENST00000331456 ARID3CA6NKF2 412 aa20.65■□□□□ 0.9
TRAIP-201ENST00000331456 PTPN23Q9H3S7 1636 aa20.62■□□□□ 0.89
TRAIP-201ENST00000331456 PLB1Q6P1J6 1458 aa20.61■□□□□ 0.89
TRAIP-201ENST00000331456 PRG4Q92954 1404 aaPredicted RBP20.6■□□□□ 0.89
TRAIP-201ENST00000331456 MIA2Q96PC5 1412 aa20.59■□□□□ 0.89
TRAIP-201ENST00000331456 TCOF1Q13428 1488 aaKnown RBP20.59■□□□□ 0.89
TRAIP-201ENST00000331456 ABCA8O94911 1581 aa20.56■□□□□ 0.88
TRAIP-201ENST00000331456 TROQ12816 1431 aaPredicted RBP20.55■□□□□ 0.88
TRAIP-201ENST00000331456 SHROOM2Q13796 1616 aa20.53■□□□□ 0.88
TRAIP-201ENST00000331456 PTPRGP23470 1445 aa20.52■□□□□ 0.88
TRAIP-201ENST00000331456 HFM1A2PYH4 1435 aa20.51■□□□□ 0.87
TRAIP-201ENST00000331456 PTPRKQ15262 1439 aa20.51■□□□□ 0.87
TRAIP-201ENST00000331456 ADCY10Q96PN6 1610 aa20.48■□□□□ 0.87
TRAIP-201ENST00000331456 PLEKHD1A6NEE1 506 aa20.46■□□□□ 0.87
TRAIP-201ENST00000331456 ATP10BO94823 1461 aa20.45■□□□□ 0.86
TRAIP-201ENST00000331456 MAPKBP1O60336 1514 aa20.45■□□□□ 0.86
TRAIP-201ENST00000331456 ITSN2Q9NZM3 1697 aa20.44■□□□□ 0.86
TRAIP-201ENST00000331456 ZNF316A6NFI3 1004 aaPredicted RBP20.44■□□□□ 0.86
TRAIP-201ENST00000331456 NAIPQ13075 1403 aa20.43■□□□□ 0.86
TRAIP-201ENST00000331456 AKNAQ7Z591 1439 aa20.43■□□□□ 0.86
TRAIP-201ENST00000331456 CLASP1Q7Z460 1538 aa20.42■□□□□ 0.86
TRAIP-201ENST00000331456 UACAQ9BZF9 1416 aa20.4■□□□□ 0.86
TRAIP-201ENST00000331456 KIF14Q15058 1648 aa20.4■□□□□ 0.86
TRAIP-201ENST00000331456 GCC2Q8IWJ2 1684 aa20.38■□□□□ 0.85
TRAIP-201ENST00000331456 CFDP1Q9UEE9 299 aaPredicted RBP20.38■□□□□ 0.85
TRAIP-201ENST00000331456 CHIC2Q9UKJ5 165 aa20.37■□□□□ 0.85
TRAIP-201ENST00000331456 DNMT1P26358 1616 aaKnown RBP20.37■□□□□ 0.85
TRAIP-201ENST00000331456 GPATCH8Q9UKJ3 1502 aaKnown RBP20.37■□□□□ 0.85
TRAIP-201ENST00000331456 DAPK1P53355 1430 aa20.37■□□□□ 0.85
TRAIP-201ENST00000331456 RRP7BPQ9NSQ0 103 aa20.35■□□□□ 0.85
TRAIP-201ENST00000331456 ERCC6L2Q5T890 1561 aa20.34■□□□□ 0.85
TRAIP-201ENST00000331456 ROCK1Q13464 1354 aa20.34■□□□□ 0.85
TRAIP-201ENST00000331456 CAMSAP2Q08AD1 1489 aa20.34■□□□□ 0.85
TRAIP-201ENST00000331456 ACIN1Q9UKV3 1341 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms