RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 LAS1LQ9Y4W2 734 aaKnown RBP18.93■□□□□ 0.62
EPHB3-201ENST00000330394 RRP7BPQ9NSQ0 103 aa18.92■□□□□ 0.62
EPHB3-201ENST00000330394 PPP4R2Q9NY27 417 aa18.92■□□□□ 0.62
EPHB3-201ENST00000330394 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
EPHB3-201ENST00000330394 EEA1Q15075 1411 aa18.91■□□□□ 0.62
EPHB3-201ENST00000330394 NOP58Q9Y2X3 529 aaKnown RBP18.9■□□□□ 0.62
EPHB3-201ENST00000330394 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
EPHB3-201ENST00000330394 WRNQ14191 1432 aaPredicted RBP eCLIP18.89■□□□□ 0.61
EPHB3-201ENST00000330394 KANK4Q5T7N3 995 aaPredicted RBP18.86■□□□□ 0.61
EPHB3-201ENST00000330394 FBLN2P98095 1184 aa18.84■□□□□ 0.61
EPHB3-201ENST00000330394 KDM2AQ9Y2K7 1162 aa18.84■□□□□ 0.61
EPHB3-201ENST00000330394 NEFMP07197 916 aa18.81■□□□□ 0.6
EPHB3-201ENST00000330394 CEP164Q9UPV0 1460 aa18.79■□□□□ 0.6
EPHB3-201ENST00000330394 MTUS2Q5JR59 1369 aa18.79■□□□□ 0.6
EPHB3-201ENST00000330394 CCNB3Q8WWL7 1395 aa18.77■□□□□ 0.6
EPHB3-201ENST00000330394 CCER2I3L3R5 266 aa18.73■□□□□ 0.59
EPHB3-201ENST00000330394 WIZO95785 1651 aa18.72■□□□□ 0.59
EPHB3-201ENST00000330394 VPS8Q8N3P4 1428 aa18.71■□□□□ 0.59
EPHB3-201ENST00000330394 RUSC2Q8N2Y8 1516 aa18.71■□□□□ 0.59
EPHB3-201ENST00000330394 UPF2Q9HAU5 1272 aaKnown RBP18.67■□□□□ 0.58
EPHB3-201ENST00000330394 NACADO15069 1562 aa18.67■□□□□ 0.58
EPHB3-201ENST00000330394 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.66■□□□□ 0.58
EPHB3-201ENST00000330394 HSP90AA1P07900 732 aaKnown RBP18.66■□□□□ 0.58
EPHB3-201ENST00000330394 BAZ1AQ9NRL2 1556 aaPredicted RBP18.66■□□□□ 0.58
EPHB3-201ENST00000330394 GLIPR1L2Q4G1C9 344 aa18.63■□□□□ 0.57
EPHB3-201ENST00000330394 RAB3GAP2Q9H2M9 1393 aa18.63■□□□□ 0.57
EPHB3-201ENST00000330394 PPM1GO15355 546 aaPredicted RBP18.62■□□□□ 0.57
EPHB3-201ENST00000330394 DHX57Q6P158 1386 aaKnown RBP18.62■□□□□ 0.57
EPHB3-201ENST00000330394 RGS3P49796 1198 aa18.61■□□□□ 0.57
EPHB3-201ENST00000330394 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.6■□□□□ 0.57
EPHB3-201ENST00000330394 HSPA5P11021 654 aaKnown RBP18.6■□□□□ 0.57
EPHB3-201ENST00000330394 DDRGK1Q96HY6 314 aa18.6■□□□□ 0.57
EPHB3-201ENST00000330394 WDR43Q15061 677 aaKnown RBP eCLIP18.6■□□□□ 0.57
EPHB3-201ENST00000330394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.59■□□□□ 0.57
EPHB3-201ENST00000330394 PPP1R15AO75807 674 aaPredicted RBP18.58■□□□□ 0.56
EPHB3-201ENST00000330394 BAZ1BQ9UIG0 1483 aaKnown RBP18.56■□□□□ 0.56
EPHB3-201ENST00000330394 SETD5Q9C0A6 1442 aa18.55■□□□□ 0.56
EPHB3-201ENST00000330394 ANP32BQ92688 251 aaKnown RBP18.55■□□□□ 0.56
EPHB3-201ENST00000330394 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
EPHB3-201ENST00000330394 FOXD1Q16676 465 aa18.54■□□□□ 0.56
EPHB3-201ENST00000330394 TIMELESSQ9UNS1 1208 aa18.52■□□□□ 0.56
EPHB3-201ENST00000330394 CARD11Q9BXL7 1154 aa18.49■□□□□ 0.55
EPHB3-201ENST00000330394 KIF27Q86VH2 1401 aa18.49■□□□□ 0.55
EPHB3-201ENST00000330394 ERICH6BQ5W0A0 696 aa18.47■□□□□ 0.55
EPHB3-201ENST00000330394 IPO9Q96P70 1041 aaKnown RBP18.46■□□□□ 0.55
EPHB3-201ENST00000330394 BECN1Q14457 450 aa18.44■□□□□ 0.54
EPHB3-201ENST00000330394 CHGAP10645 457 aaKnown RBP18.43■□□□□ 0.54
EPHB3-201ENST00000330394 NAP1L5Q96NT1 182 aaPredicted RBP18.43■□□□□ 0.54
EPHB3-201ENST00000330394 RAPGEF2Q9Y4G8 1499 aa18.43■□□□□ 0.54
EPHB3-201ENST00000330394 TSPY4P0CV99 314 aa18.42■□□□□ 0.54
EPHB3-201ENST00000330394 TSPY10P0CW01 314 aa18.42■□□□□ 0.54
EPHB3-201ENST00000330394 CC2D1BQ5T0F9 858 aaKnown RBP18.42■□□□□ 0.54
EPHB3-201ENST00000330394 SLC24A1O60721 1099 aa18.41■□□□□ 0.54
EPHB3-201ENST00000330394 FANCIQ9NVI1 1328 aa18.4■□□□□ 0.54
EPHB3-201ENST00000330394 NEUROD2Q15784 382 aa18.4■□□□□ 0.54
EPHB3-201ENST00000330394 TRIM44Q96DX7 344 aaPredicted RBP18.39■□□□□ 0.53
EPHB3-201ENST00000330394 ARID4BQ4LE39 1312 aaPredicted RBP18.35■□□□□ 0.53
EPHB3-201ENST00000330394 SPRYD3Q8NCJ5 442 aa18.34■□□□□ 0.53
EPHB3-201ENST00000330394 FRAT1Q92837 279 aaPredicted RBP18.34■□□□□ 0.53
EPHB3-201ENST00000330394 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.53
EPHB3-201ENST00000330394 SLC4A3P48751 1232 aa18.33■□□□□ 0.52
EPHB3-201ENST00000330394 RCAN3Q9UKA8 241 aa18.33■□□□□ 0.52
EPHB3-201ENST00000330394 CUX2O14529 1486 aa18.33■□□□□ 0.52
EPHB3-201ENST00000330394 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
EPHB3-201ENST00000330394 NUDCQ9Y266 331 aa18.32■□□□□ 0.52
EPHB3-201ENST00000330394 CARMIL1Q5VZK9 1371 aa18.31■□□□□ 0.52
EPHB3-201ENST00000330394 TOP2AP11388 1531 aaKnown RBP18.3■□□□□ 0.52
EPHB3-201ENST00000330394 SLKQ9H2G2 1235 aaPredicted RBP18.3■□□□□ 0.52
EPHB3-201ENST00000330394 TCERG1O14776 1098 aaKnown RBP18.29■□□□□ 0.52
EPHB3-201ENST00000330394 KNSTRNQ9Y448 316 aa18.29■□□□□ 0.52
EPHB3-201ENST00000330394 CFDP1Q9UEE9 299 aaPredicted RBP18.28■□□□□ 0.52
EPHB3-201ENST00000330394 DCAF11Q8TEB1 546 aa18.27■□□□□ 0.52
EPHB3-201ENST00000330394 NCLP19338 710 aaKnown RBP18.27■□□□□ 0.52
EPHB3-201ENST00000330394 PRKRIP1Q9H875 184 aaPredicted RBP18.27■□□□□ 0.51
EPHB3-201ENST00000330394 GZF1Q9H116 711 aaPredicted RBP18.25■□□□□ 0.51
EPHB3-201ENST00000330394 MPHOSPH9Q99550 1183 aa18.25■□□□□ 0.51
EPHB3-201ENST00000330394 FHAD1B1AJZ9 1412 aa18.25■□□□□ 0.51
EPHB3-201ENST00000330394 PAK3O75914 559 aaPredicted RBP18.24■□□□□ 0.51
EPHB3-201ENST00000330394 ANO8Q9HCE9 1232 aaPredicted RBP18.23■□□□□ 0.51
EPHB3-201ENST00000330394 TNNT2P45379 298 aaPredicted RBP18.23■□□□□ 0.51
EPHB3-201ENST00000330394 MSH5O43196 834 aa18.22■□□□□ 0.51
EPHB3-201ENST00000330394 PDE4AP27815 886 aa18.22■□□□□ 0.51
EPHB3-201ENST00000330394 EXOC6Q8TAG9 804 aa18.22■□□□□ 0.51
EPHB3-201ENST00000330394 PLIN1O60240 522 aa18.21■□□□□ 0.51
EPHB3-201ENST00000330394 ARHGAP35Q9NRY4 1499 aa18.21■□□□□ 0.51
EPHB3-201ENST00000330394 TPRNQ4KMQ1 711 aa18.19■□□□□ 0.5
EPHB3-201ENST00000330394 IL27Q8NEV9 243 aa18.17■□□□□ 0.5
EPHB3-201ENST00000330394 PKD2Q13563 968 aa18.16■□□□□ 0.5
EPHB3-201ENST00000330394 ZBED9Q6R2W3 1325 aa18.16■□□□□ 0.5
EPHB3-201ENST00000330394 FTSJ3Q8IY81 847 aaKnown RBP18.16■□□□□ 0.5
EPHB3-201ENST00000330394 CHMP7Q8WUX9 453 aaPredicted RBP18.14■□□□□ 0.49
EPHB3-201ENST00000330394 GOLGA6L22H0YM25 854 aa18.14■□□□□ 0.49
EPHB3-201ENST00000330394 SMARCA4P51532 1647 aa18.13■□□□□ 0.49
EPHB3-201ENST00000330394 GSE1Q14687 1217 aa18.12■□□□□ 0.49
EPHB3-201ENST00000330394 SMARCA2P51531 1590 aa18.11■□□□□ 0.49
EPHB3-201ENST00000330394 FHOD3Q2V2M9 1422 aa18.11■□□□□ 0.49
EPHB3-201ENST00000330394 PNNQ9H307 717 aaKnown RBP18.11■□□□□ 0.49
EPHB3-201ENST00000330394 PLEKHD1A6NEE1 506 aa18.1■□□□□ 0.49
EPHB3-201ENST00000330394 TDRD9Q8NDG6 1382 aaKnown RBP18.1■□□□□ 0.49
EPHB3-201ENST00000330394 L1TD1Q5T7N2 865 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms