RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 FHAD1B1AJZ9 1412 aa31.43■■■□□ 2.62
RIPPLY3-201ENST00000329553 CTTNBP2Q8WZ74 1663 aa31.41■■■□□ 2.62
RIPPLY3-201ENST00000329553 EIF4G3O43432 1585 aaKnown RBP31.39■■■□□ 2.61
RIPPLY3-201ENST00000329553 ADAMTS12P58397 1594 aa31.39■■■□□ 2.61
RIPPLY3-201ENST00000329553 APLP2Q06481 763 aa31.36■■■□□ 2.61
RIPPLY3-201ENST00000329553 P3H3Q8IVL6 736 aa31.29■■■□□ 2.6
RIPPLY3-201ENST00000329553 SNAPC4Q5SXM2 1469 aa31.29■■■□□ 2.6
RIPPLY3-201ENST00000329553 EFCAB5A4FU69 1503 aa31.24■■■□□ 2.59
RIPPLY3-201ENST00000329553 FHOD3Q2V2M9 1422 aa31.19■■■□□ 2.58
RIPPLY3-201ENST00000329553 MAGI1Q96QZ7 1491 aaPredicted RBP31.17■■■□□ 2.58
RIPPLY3-201ENST00000329553 KANK4Q5T7N3 995 aaPredicted RBP31.12■■■□□ 2.57
RIPPLY3-201ENST00000329553 SAMD9Q5K651 1589 aa31.12■■■□□ 2.57
RIPPLY3-201ENST00000329553 GRIN2AQ12879 1464 aa31.12■■■□□ 2.57
RIPPLY3-201ENST00000329553 IQGAP2Q13576 1575 aa31.09■■■□□ 2.57
RIPPLY3-201ENST00000329553 CHMP7Q8WUX9 453 aaPredicted RBP31.08■■■□□ 2.57
RIPPLY3-201ENST00000329553 SYNJ2O15056 1496 aa31.08■■■□□ 2.57
RIPPLY3-201ENST00000329553 PCF11O94913 1555 aaKnown RBP31.02■■■□□ 2.56
RIPPLY3-201ENST00000329553 FBLN2P98095 1184 aa31.02■■■□□ 2.56
RIPPLY3-201ENST00000329553 KIAA0586Q9BVV6 1533 aa31.02■■■□□ 2.56
RIPPLY3-201ENST00000329553 FMN1Q68DA7 1419 aa31.01■■■□□ 2.55
RIPPLY3-201ENST00000329553 MAP3K1Q13233 1512 aa30.99■■■□□ 2.55
RIPPLY3-201ENST00000329553 CASKIN1Q8WXD9 1431 aa30.98■■■□□ 2.55
RIPPLY3-201ENST00000329553 TIAM1Q13009 1591 aa30.97■■■□□ 2.55
RIPPLY3-201ENST00000329553 ATP1B4Q9UN42 357 aaPredicted RBP30.97■■■□□ 2.55
RIPPLY3-201ENST00000329553 FYCO1Q9BQS8 1478 aa30.95■■■□□ 2.55
RIPPLY3-201ENST00000329553 UGGT2Q9NYU1 1516 aa30.94■■■□□ 2.54
RIPPLY3-201ENST00000329553 CEP170Q5SW79 1584 aa30.92■■■□□ 2.54
RIPPLY3-201ENST00000329553 NUP160Q12769 1436 aa30.88■■■□□ 2.53
RIPPLY3-201ENST00000329553 LRRC9Q6ZRR7 1453 aa30.85■■■□□ 2.53
RIPPLY3-201ENST00000329553 CFAP43Q8NDM7 1665 aa30.85■■■□□ 2.53
RIPPLY3-201ENST00000329553 DISP1Q96F81 1524 aa30.82■■■□□ 2.52
RIPPLY3-201ENST00000329553 ZEB1P37275 1124 aaPredicted RBP30.78■■■□□ 2.52
RIPPLY3-201ENST00000329553 KIAA0556O60303 1618 aa30.77■■■□□ 2.52
RIPPLY3-201ENST00000329553 JPH4Q96JJ6 628 aa30.74■■■□□ 2.51
RIPPLY3-201ENST00000329553 HNRNPUL2Q1KMD3 747 aaKnown RBP30.74■■■□□ 2.51
RIPPLY3-201ENST00000329553 LRRIQ1Q96JM4 1722 aa30.73■■■□□ 2.51
RIPPLY3-201ENST00000329553 RRBP1Q9P2E9 1410 aaKnown RBP30.72■■■□□ 2.51
RIPPLY3-201ENST00000329553 CHD1O14646 1710 aa30.69■■■□□ 2.5
RIPPLY3-201ENST00000329553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.67■■■□□ 2.5
RIPPLY3-201ENST00000329553 PHLDB1Q86UU1 1377 aa30.63■■■□□ 2.49
RIPPLY3-201ENST00000329553 CCNB3Q8WWL7 1395 aa30.63■■■□□ 2.49
RIPPLY3-201ENST00000329553 HECW1Q76N89 1606 aa30.62■■■□□ 2.49
RIPPLY3-201ENST00000329553 CARMIL2Q6F5E8 1435 aa30.61■■■□□ 2.49
RIPPLY3-201ENST00000329553 MTUS2Q5JR59 1369 aa30.6■■■□□ 2.49
RIPPLY3-201ENST00000329553 CCDC18Q5T9S5 1454 aa30.59■■■□□ 2.49
RIPPLY3-201ENST00000329553 EPRSP07814 1512 aaKnown RBP30.57■■■□□ 2.48
RIPPLY3-201ENST00000329553 CCER1Q8TC90 406 aaPredicted RBP30.54■■■□□ 2.48
RIPPLY3-201ENST00000329553 ARID3CA6NKF2 412 aa30.51■■■□□ 2.48
RIPPLY3-201ENST00000329553 CDK13Q14004 1512 aaKnown RBP30.51■■■□□ 2.47
RIPPLY3-201ENST00000329553 RAPGEF6Q8TEU7 1601 aa30.5■■■□□ 2.47
RIPPLY3-201ENST00000329553 MAGI3Q5TCQ9 1506 aa30.5■■■□□ 2.47
RIPPLY3-201ENST00000329553 PRG4Q92954 1404 aaPredicted RBP30.48■■■□□ 2.47
RIPPLY3-201ENST00000329553 NUP153P49790 1475 aaKnown RBP30.48■■■□□ 2.47
RIPPLY3-201ENST00000329553 EHBP1L1Q8N3D4 1523 aa30.48■■■□□ 2.47
RIPPLY3-201ENST00000329553 PLB1Q6P1J6 1458 aa30.45■■■□□ 2.47
RIPPLY3-201ENST00000329553 NCOA2Q15596 1464 aa30.43■■■□□ 2.46
RIPPLY3-201ENST00000329553 SUPT6HQ7KZ85 1726 aaKnown RBP30.42■■■□□ 2.46
RIPPLY3-201ENST00000329553 ITGAEP38570 1179 aa30.41■■■□□ 2.46
RIPPLY3-201ENST00000329553 FAM50AQ14320 339 aaKnown RBP30.4■■■□□ 2.46
RIPPLY3-201ENST00000329553 SHROOM2Q13796 1616 aa30.39■■■□□ 2.46
RIPPLY3-201ENST00000329553 ARHGEF11O15085 1522 aa30.36■■■□□ 2.45
RIPPLY3-201ENST00000329553 FGD6Q6ZV73 1430 aa30.35■■■□□ 2.45
RIPPLY3-201ENST00000329553 PTPRGP23470 1445 aa30.33■■■□□ 2.45
RIPPLY3-201ENST00000329553 ABCA8O94911 1581 aa30.32■■■□□ 2.44
RIPPLY3-201ENST00000329553 MYOM3Q5VTT5 1437 aa30.32■■■□□ 2.44
RIPPLY3-201ENST00000329553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.32■■■□□ 2.44
RIPPLY3-201ENST00000329553 CLASP1Q7Z460 1538 aa30.31■■■□□ 2.44
RIPPLY3-201ENST00000329553 CDK11AQ9UQ88 783 aaPredicted RBP30.29■■■□□ 2.44
RIPPLY3-201ENST00000329553 ERCC6L2Q5T890 1561 aa30.25■■■□□ 2.43
RIPPLY3-201ENST00000329553 ATP10BO94823 1461 aa30.19■■■□□ 2.42
RIPPLY3-201ENST00000329553 TROQ12816 1431 aaPredicted RBP30.18■■■□□ 2.42
RIPPLY3-201ENST00000329553 PTPN23Q9H3S7 1636 aa30.16■■■□□ 2.42
RIPPLY3-201ENST00000329553 UACAQ9BZF9 1416 aa30.13■■■□□ 2.41
RIPPLY3-201ENST00000329553 MIA2Q96PC5 1412 aa30.11■■■□□ 2.41
RIPPLY3-201ENST00000329553 PLEKHD1A6NEE1 506 aa30.11■■■□□ 2.41
RIPPLY3-201ENST00000329553 RAB3GAP2Q9H2M9 1393 aa30.11■■■□□ 2.41
RIPPLY3-201ENST00000329553 SETD5Q9C0A6 1442 aa30.11■■■□□ 2.41
RIPPLY3-201ENST00000329553 TCOF1Q13428 1488 aaKnown RBP30.1■■■□□ 2.41
RIPPLY3-201ENST00000329553 DHX57Q6P158 1386 aaKnown RBP30.09■■■□□ 2.41
RIPPLY3-201ENST00000329553 PTPRKQ15262 1439 aa30.09■■■□□ 2.41
RIPPLY3-201ENST00000329553 KIF14Q15058 1648 aa30.05■■■□□ 2.4
RIPPLY3-201ENST00000329553 ADCY10Q96PN6 1610 aa30.05■■■□□ 2.4
RIPPLY3-201ENST00000329553 OSCARQ8IYS5 282 aa30.01■■■□□ 2.39
RIPPLY3-201ENST00000329553 ABCC2Q92887 1545 aa30■■■□□ 2.39
RIPPLY3-201ENST00000329553 GPATCH8Q9UKJ3 1502 aaKnown RBP29.96■■■□□ 2.39
RIPPLY3-201ENST00000329553 ZNF644Q9H582 1327 aaPredicted RBP29.95■■■□□ 2.38
RIPPLY3-201ENST00000329553 CLSPNQ9HAW4 1339 aa29.95■■■□□ 2.38
RIPPLY3-201ENST00000329553 CFDP1Q9UEE9 299 aaPredicted RBP29.92■■■□□ 2.38
RIPPLY3-201ENST00000329553 ABCC10Q5T3U5 1492 aa29.92■■■□□ 2.38
RIPPLY3-201ENST00000329553 HFM1A2PYH4 1435 aa29.91■■■□□ 2.38
RIPPLY3-201ENST00000329553 ITSN2Q9NZM3 1697 aa29.91■■■□□ 2.38
RIPPLY3-201ENST00000329553 UHRF1BP1LA0JNW5 1464 aa29.9■■■□□ 2.38
RIPPLY3-201ENST00000329553 CHIC2Q9UKJ5 165 aa29.89■■■□□ 2.38
RIPPLY3-201ENST00000329553 NAIPQ13075 1403 aa29.87■■■□□ 2.37
RIPPLY3-201ENST00000329553 CDC42BPAQ5VT25 1732 aa29.84■■■□□ 2.37
RIPPLY3-201ENST00000329553 DAPK1P53355 1430 aa29.83■■■□□ 2.37
RIPPLY3-201ENST00000329553 RRP7BPQ9NSQ0 103 aa29.83■■■□□ 2.37
RIPPLY3-201ENST00000329553 ZNF777Q9ULD5 760 aaPredicted RBP29.83■■■□□ 2.37
RIPPLY3-201ENST00000329553 ABCC5O15440 1437 aa29.82■■■□□ 2.36
RIPPLY3-201ENST00000329553 CAMSAP2Q08AD1 1489 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 440.5 ms