RNA–Protein interactions for RNA: ENST00000324727.8

SCN4B-201, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4B, Length 4,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-201ENST00000324727 PLEKHG5O94827 1062 aa15.93■□□□□ 0.14
SCN4B-201ENST00000324727 SALL2Q9Y467 1007 aaPredicted RBP15.93■□□□□ 0.14
SCN4B-201ENST00000324727 KIF27Q86VH2 1401 aa15.92■□□□□ 0.14
SCN4B-201ENST00000324727 RGL3Q3MIN7 710 aa15.91■□□□□ 0.14
SCN4B-201ENST00000324727 TDRD9Q8NDG6 1382 aaKnown RBP15.89■□□□□ 0.13
SCN4B-201ENST00000324727 NPM2Q86SE8 214 aaKnown RBP15.88■□□□□ 0.13
SCN4B-201ENST00000324727 CFDP1Q9UEE9 299 aaPredicted RBP15.87■□□□□ 0.13
SCN4B-201ENST00000324727 SENP3-EIF4A1A0A087X0R7 540 aa15.85■□□□□ 0.13
SCN4B-201ENST00000324727 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
SCN4B-201ENST00000324727 GOLGA3Q08378 1498 aa15.84■□□□□ 0.13
SCN4B-201ENST00000324727 CUX2O14529 1486 aa15.84■□□□□ 0.13
SCN4B-201ENST00000324727 FAM9BQ8IZU0 186 aa15.82■□□□□ 0.12
SCN4B-201ENST00000324727 ZBTB47Q9UFB7 747 aaPredicted RBP15.81■□□□□ 0.12
SCN4B-201ENST00000324727 CARMIL1Q5VZK9 1371 aa15.81■□□□□ 0.12
SCN4B-201ENST00000324727 ABCC8Q09428 1581 aa15.81■□□□□ 0.12
SCN4B-201ENST00000324727 ARID4BQ4LE39 1312 aaPredicted RBP15.8■□□□□ 0.12
SCN4B-201ENST00000324727 EEA1Q15075 1411 aa15.76■□□□□ 0.11
SCN4B-201ENST00000324727 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
SCN4B-201ENST00000324727 TNIKQ9UKE5 1360 aa15.75■□□□□ 0.11
SCN4B-201ENST00000324727 SIN3AQ96ST3 1273 aa15.75■□□□□ 0.11
SCN4B-201ENST00000324727 NEFMP07197 916 aa15.72■□□□□ 0.11
SCN4B-201ENST00000324727 CANXP27824 592 aaKnown RBP15.72■□□□□ 0.11
SCN4B-201ENST00000324727 HNRNPUQ00839 825 aaKnown RBP eCLIP15.72■□□□□ 0.11
SCN4B-201ENST00000324727 MLECQ14165 292 aa15.72■□□□□ 0.11
SCN4B-201ENST00000324727 CEP164Q9UPV0 1460 aa15.72■□□□□ 0.11
SCN4B-201ENST00000324727 SUPT16HQ9Y5B9 1047 aaKnown RBP15.71■□□□□ 0.11
SCN4B-201ENST00000324727 EIF4G1Q04637 1599 aaKnown RBP15.71■□□□□ 0.11
SCN4B-201ENST00000324727 KANK4Q5T7N3 995 aaPredicted RBP15.7■□□□□ 0.1
SCN4B-201ENST00000324727 WIZO95785 1651 aa15.68■□□□□ 0.1
SCN4B-201ENST00000324727 RTN4Q9NQC3 1192 aaKnown RBP15.68■□□□□ 0.1
SCN4B-201ENST00000324727 PPP1R15AO75807 674 aaPredicted RBP15.68■□□□□ 0.1
SCN4B-201ENST00000324727 TMC1Q8TDI8 760 aa15.64■□□□□ 0.09
SCN4B-201ENST00000324727 IRX6P78412 446 aaPredicted RBP15.64■□□□□ 0.09
SCN4B-201ENST00000324727 ZBTB7CA1YPR0 619 aa15.63■□□□□ 0.09
SCN4B-201ENST00000324727 PDS5BQ9NTI5 1447 aa15.63■□□□□ 0.09
SCN4B-201ENST00000324727 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
SCN4B-201ENST00000324727 C14orf37Q86TY3 774 aa15.62■□□□□ 0.09
SCN4B-201ENST00000324727 CCDC136Q96JN2 1154 aa15.61■□□□□ 0.09
SCN4B-201ENST00000324727 FOXD1Q16676 465 aa15.61■□□□□ 0.09
SCN4B-201ENST00000324727 MRS2Q9HD23 443 aa15.61■□□□□ 0.09
SCN4B-201ENST00000324727 DEKP35659 375 aaKnown RBP15.6■□□□□ 0.09
SCN4B-201ENST00000324727 ATAD2BQ9ULI0 1458 aa15.6■□□□□ 0.09
SCN4B-201ENST00000324727 EIF4G2P78344 907 aaKnown RBP eCLIP15.6■□□□□ 0.09
SCN4B-201ENST00000324727 A0A0G2JS52 829 aa15.59■□□□□ 0.09
SCN4B-201ENST00000324727 GGT6Q6P531 493 aa15.58■□□□□ 0.08
SCN4B-201ENST00000324727 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
SCN4B-201ENST00000324727 CCNB3Q8WWL7 1395 aa15.56■□□□□ 0.08
SCN4B-201ENST00000324727 RBM19Q9Y4C8 960 aaKnown RBP15.56■□□□□ 0.08
SCN4B-201ENST00000324727 TSHZ2Q9NRE2 1034 aa15.54■□□□□ 0.08
SCN4B-201ENST00000324727 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
SCN4B-201ENST00000324727 PPM1GO15355 546 aaPredicted RBP15.52■□□□□ 0.07
SCN4B-201ENST00000324727 ANP32BQ92688 251 aaKnown RBP15.52■□□□□ 0.07
SCN4B-201ENST00000324727 CARD11Q9BXL7 1154 aa15.52■□□□□ 0.07
SCN4B-201ENST00000324727 ARXQ96QS3 562 aa15.51■□□□□ 0.07
SCN4B-201ENST00000324727 JPH4Q96JJ6 628 aa15.51■□□□□ 0.07
SCN4B-201ENST00000324727 SAFB2Q14151 953 aaKnown RBP eCLIP15.5■□□□□ 0.07
SCN4B-201ENST00000324727 TNNT2P45379 298 aaPredicted RBP15.48■□□□□ 0.07
SCN4B-201ENST00000324727 LMOD2Q6P5Q4 547 aa15.48■□□□□ 0.07
SCN4B-201ENST00000324727 DCAF11Q8TEB1 546 aa15.48■□□□□ 0.07
SCN4B-201ENST00000324727 CYB5RLQ6IPT4 315 aa15.48■□□□□ 0.07
SCN4B-201ENST00000324727 ERICH6BQ5W0A0 696 aa15.48■□□□□ 0.07
SCN4B-201ENST00000324727 NOP58Q9Y2X3 529 aaKnown RBP15.48■□□□□ 0.07
SCN4B-201ENST00000324727 WDR43Q15061 677 aaKnown RBP eCLIP15.47■□□□□ 0.07
SCN4B-201ENST00000324727 FHAD1B1AJZ9 1412 aa15.46■□□□□ 0.07
SCN4B-201ENST00000324727 FHOD3Q2V2M9 1422 aa15.45■□□□□ 0.06
SCN4B-201ENST00000324727 DNAJC5BQ9UF47 199 aa15.45■□□□□ 0.06
SCN4B-201ENST00000324727 HNRNPMP52272 730 aaKnown RBP eCLIP15.44■□□□□ 0.06
SCN4B-201ENST00000324727 TOP2AP11388 1531 aaKnown RBP15.44■□□□□ 0.06
SCN4B-201ENST00000324727 NEUROD2Q15784 382 aa15.43■□□□□ 0.06
SCN4B-201ENST00000324727 PKD2Q13563 968 aa15.42■□□□□ 0.06
SCN4B-201ENST00000324727 RAPGEF2Q9Y4G8 1499 aa15.41■□□□□ 0.06
SCN4B-201ENST00000324727 SOX12O15370 315 aa15.41■□□□□ 0.06
SCN4B-201ENST00000324727 POGKQ9P215 609 aa15.41■□□□□ 0.06
SCN4B-201ENST00000324727 VPS8Q8N3P4 1428 aa15.41■□□□□ 0.06
SCN4B-201ENST00000324727 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.4■□□□□ 0.06
SCN4B-201ENST00000324727 FANCD2Q9BXW9 1451 aa15.39■□□□□ 0.05
SCN4B-201ENST00000324727 STK26Q9P289 416 aa15.39■□□□□ 0.05
SCN4B-201ENST00000324727 CARMIL2Q6F5E8 1435 aa15.38■□□□□ 0.05
SCN4B-201ENST00000324727 SMARCA4P51532 1647 aa15.38■□□□□ 0.05
SCN4B-201ENST00000324727 NUTM2DQ5VT03 806 aaPredicted RBP15.37■□□□□ 0.05
SCN4B-201ENST00000324727 LAS1LQ9Y4W2 734 aaKnown RBP15.37■□□□□ 0.05
SCN4B-201ENST00000324727 UPF2Q9HAU5 1272 aaKnown RBP15.37■□□□□ 0.05
SCN4B-201ENST00000324727 EFCAB2Q5VUJ9 269 aa15.36■□□□□ 0.05
SCN4B-201ENST00000324727 KIF3BO15066 747 aa15.36■□□□□ 0.05
SCN4B-201ENST00000324727 HAP1P54257 671 aaPredicted RBP15.35■□□□□ 0.05
SCN4B-201ENST00000324727 CC2D1BQ5T0F9 858 aaKnown RBP15.35■□□□□ 0.05
SCN4B-201ENST00000324727 KNSTRNQ9Y448 316 aa15.35■□□□□ 0.05
SCN4B-201ENST00000324727 NAP1L5Q96NT1 182 aaPredicted RBP15.35■□□□□ 0.05
SCN4B-201ENST00000324727 DDRGK1Q96HY6 314 aa15.34■□□□□ 0.05
SCN4B-201ENST00000324727 PPP4R2Q9NY27 417 aa15.34■□□□□ 0.05
SCN4B-201ENST00000324727 RAD54L2Q9Y4B4 1467 aa15.34■□□□□ 0.05
SCN4B-201ENST00000324727 HSP90AA1P07900 732 aaKnown RBP15.33■□□□□ 0.04
SCN4B-201ENST00000324727 NUP155O75694 1391 aa15.3■□□□□ 0.04
SCN4B-201ENST00000324727 TRIM44Q96DX7 344 aaPredicted RBP15.29■□□□□ 0.04
SCN4B-201ENST00000324727 MPHOSPH9Q99550 1183 aa15.29■□□□□ 0.04
SCN4B-201ENST00000324727 ARHGAP35Q9NRY4 1499 aa15.27■□□□□ 0.04
SCN4B-201ENST00000324727 AQRO60306 1485 aaKnown RBP eCLIP15.26■□□□□ 0.03
SCN4B-201ENST00000324727 FMN1Q68DA7 1419 aa15.26■□□□□ 0.03
SCN4B-201ENST00000324727 SRPK2P78362 688 aaKnown RBP15.26■□□□□ 0.03
SCN4B-201ENST00000324727 OSCARQ8IYS5 282 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms