RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 CTTNBP2Q8WZ74 1663 aa40.97■■■■■ 4.15
TM6SF1-202ENST00000322019 ADAMTS12P58397 1594 aa40.95■■■■■ 4.15
TM6SF1-202ENST00000322019 FHAD1B1AJZ9 1412 aa40.94■■■■■ 4.14
TM6SF1-202ENST00000322019 P3H3Q8IVL6 736 aa40.92■■■■■ 4.14
TM6SF1-202ENST00000322019 APLP2Q06481 763 aa40.87■■■■■ 4.13
TM6SF1-202ENST00000322019 SNAPC4Q5SXM2 1469 aa40.85■■■■■ 4.13
TM6SF1-202ENST00000322019 FHOD3Q2V2M9 1422 aa40.77■■■■■ 4.12
TM6SF1-202ENST00000322019 EFCAB5A4FU69 1503 aa40.69■■■■■ 4.1
TM6SF1-202ENST00000322019 KANK4Q5T7N3 995 aaPredicted RBP40.65■■■■■ 4.1
TM6SF1-202ENST00000322019 HRCP23327 699 aa40.6■■■■■ 4.09
TM6SF1-202ENST00000322019 MAGI1Q96QZ7 1491 aaPredicted RBP40.6■■■■■ 4.09
TM6SF1-202ENST00000322019 GRIN2AQ12879 1464 aa40.58■■■■■ 4.09
TM6SF1-202ENST00000322019 SAMD9Q5K651 1589 aa40.57■■■■■ 4.09
TM6SF1-202ENST00000322019 PCF11O94913 1555 aaKnown RBP40.55■■■■■ 4.08
TM6SF1-202ENST00000322019 IQGAP2Q13576 1575 aa40.55■■■■■ 4.08
TM6SF1-202ENST00000322019 FBLN2P98095 1184 aa40.55■■■■■ 4.08
TM6SF1-202ENST00000322019 CHMP7Q8WUX9 453 aaPredicted RBP40.53■■■■■ 4.08
TM6SF1-202ENST00000322019 ATP1B4Q9UN42 357 aaPredicted RBP40.51■■■■■ 4.08
TM6SF1-202ENST00000322019 SYNJ2O15056 1496 aa40.5■■■■■ 4.07
TM6SF1-202ENST00000322019 TIAM1Q13009 1591 aa40.41■■■■■ 4.06
TM6SF1-202ENST00000322019 KIAA0586Q9BVV6 1533 aa40.39■■■■■ 4.06
TM6SF1-202ENST00000322019 FMN1Q68DA7 1419 aa40.39■■■■■ 4.06
TM6SF1-202ENST00000322019 CEP170Q5SW79 1584 aa40.38■■■■■ 4.05
TM6SF1-202ENST00000322019 CASKIN1Q8WXD9 1431 aa40.36■■■■■ 4.05
TM6SF1-202ENST00000322019 FYCO1Q9BQS8 1478 aa40.36■■■■■ 4.05
TM6SF1-202ENST00000322019 UGGT2Q9NYU1 1516 aa40.3■■■■■ 4.04
TM6SF1-202ENST00000322019 MAP3K1Q13233 1512 aa40.29■■■■■ 4.04
TM6SF1-202ENST00000322019 CFAP43Q8NDM7 1665 aa40.25■■■■■ 4.03
TM6SF1-202ENST00000322019 LRRC9Q6ZRR7 1453 aa40.24■■■■■ 4.03
TM6SF1-202ENST00000322019 NUP160Q12769 1436 aa40.22■■■■■ 4.03
TM6SF1-202ENST00000322019 DISP1Q96F81 1524 aa40.2■■■■■ 4.03
TM6SF1-202ENST00000322019 HNRNPUL2Q1KMD3 747 aaKnown RBP40.2■■■■■ 4.03
TM6SF1-202ENST00000322019 KIAA0556O60303 1618 aa40.15■■■■■ 4.02
TM6SF1-202ENST00000322019 LRRIQ1Q96JM4 1722 aa40.15■■■■■ 4.02
TM6SF1-202ENST00000322019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.13■■■■■ 4.01
TM6SF1-202ENST00000322019 CHD1O14646 1710 aa40.06■■■■■ 4
TM6SF1-202ENST00000322019 JPH4Q96JJ6 628 aa40.04■■■■■ 4
TM6SF1-202ENST00000322019 RRBP1Q9P2E9 1410 aaKnown RBP40.03■■■■■ 4
TM6SF1-202ENST00000322019 PHLDB1Q86UU1 1377 aa40.01■■■■■ 4
TM6SF1-202ENST00000322019 ARID3CA6NKF2 412 aa40.01■■■■■ 4
TM6SF1-202ENST00000322019 CCNB3Q8WWL7 1395 aa39.95■■■■□ 3.99
TM6SF1-202ENST00000322019 HECW1Q76N89 1606 aa39.94■■■■□ 3.98
TM6SF1-202ENST00000322019 MTUS2Q5JR59 1369 aa39.93■■■■□ 3.98
TM6SF1-202ENST00000322019 CCER1Q8TC90 406 aaPredicted RBP39.9■■■■□ 3.98
TM6SF1-202ENST00000322019 CDK13Q14004 1512 aaKnown RBP39.89■■■■□ 3.98
TM6SF1-202ENST00000322019 EPRSP07814 1512 aaKnown RBP39.87■■■■□ 3.97
TM6SF1-202ENST00000322019 CARMIL2Q6F5E8 1435 aa39.86■■■■□ 3.97
TM6SF1-202ENST00000322019 MAGI3Q5TCQ9 1506 aa39.85■■■■□ 3.97
TM6SF1-202ENST00000322019 CCDC18Q5T9S5 1454 aa39.85■■■■□ 3.97
TM6SF1-202ENST00000322019 ITGAEP38570 1179 aa39.82■■■■□ 3.96
TM6SF1-202ENST00000322019 RAPGEF6Q8TEU7 1601 aa39.78■■■■□ 3.96
TM6SF1-202ENST00000322019 PLB1Q6P1J6 1458 aa39.78■■■■□ 3.96
TM6SF1-202ENST00000322019 NUP153P49790 1475 aaKnown RBP39.77■■■■□ 3.96
TM6SF1-202ENST00000322019 PRG4Q92954 1404 aaPredicted RBP39.77■■■■□ 3.96
TM6SF1-202ENST00000322019 ZEB1P37275 1124 aaPredicted RBP39.74■■■■□ 3.95
TM6SF1-202ENST00000322019 EHBP1L1Q8N3D4 1523 aa39.74■■■■□ 3.95
TM6SF1-202ENST00000322019 FAM50AQ14320 339 aaKnown RBP39.72■■■■□ 3.95
TM6SF1-202ENST00000322019 NCOA2Q15596 1464 aa39.71■■■■□ 3.95
TM6SF1-202ENST00000322019 SUPT6HQ7KZ85 1726 aaKnown RBP39.66■■■■□ 3.94
TM6SF1-202ENST00000322019 FGD6Q6ZV73 1430 aa39.6■■■■□ 3.93
TM6SF1-202ENST00000322019 SHROOM2Q13796 1616 aa39.59■■■■□ 3.93
TM6SF1-202ENST00000322019 ERCC6L2Q5T890 1561 aa39.56■■■■□ 3.92
TM6SF1-202ENST00000322019 ARHGEF11O15085 1522 aa39.55■■■■□ 3.92
TM6SF1-202ENST00000322019 MYOM3Q5VTT5 1437 aa39.54■■■■□ 3.92
TM6SF1-202ENST00000322019 PTPRGP23470 1445 aa39.52■■■■□ 3.92
TM6SF1-202ENST00000322019 ABCA8O94911 1581 aa39.52■■■■□ 3.92
TM6SF1-202ENST00000322019 CLASP1Q7Z460 1538 aa39.51■■■■□ 3.92
TM6SF1-202ENST00000322019 CDK11AQ9UQ88 783 aaPredicted RBP39.41■■■■□ 3.9
TM6SF1-202ENST00000322019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.39■■■■□ 3.9
TM6SF1-202ENST00000322019 ATP10BO94823 1461 aa39.36■■■■□ 3.89
TM6SF1-202ENST00000322019 PTPN23Q9H3S7 1636 aa39.35■■■■□ 3.89
TM6SF1-202ENST00000322019 TROQ12816 1431 aaPredicted RBP39.34■■■■□ 3.89
TM6SF1-202ENST00000322019 RAB3GAP2Q9H2M9 1393 aa39.31■■■■□ 3.88
TM6SF1-202ENST00000322019 PTPRKQ15262 1439 aa39.29■■■■□ 3.88
TM6SF1-202ENST00000322019 KIF14Q15058 1648 aa39.27■■■■□ 3.88
TM6SF1-202ENST00000322019 UACAQ9BZF9 1416 aa39.27■■■■□ 3.88
TM6SF1-202ENST00000322019 DHX57Q6P158 1386 aaKnown RBP39.26■■■■□ 3.88
TM6SF1-202ENST00000322019 SETD5Q9C0A6 1442 aa39.24■■■■□ 3.87
TM6SF1-202ENST00000322019 TCOF1Q13428 1488 aaKnown RBP39.21■■■■□ 3.87
TM6SF1-202ENST00000322019 PLEKHD1A6NEE1 506 aa39.2■■■■□ 3.87
TM6SF1-202ENST00000322019 MIA2Q96PC5 1412 aa39.19■■■■□ 3.86
TM6SF1-202ENST00000322019 ADCY10Q96PN6 1610 aa39.14■■■■□ 3.86
TM6SF1-202ENST00000322019 ZNF644Q9H582 1327 aaPredicted RBP39.14■■■■□ 3.86
TM6SF1-202ENST00000322019 ABCC2Q92887 1545 aa39.11■■■■□ 3.85
TM6SF1-202ENST00000322019 CHIC2Q9UKJ5 165 aa39.08■■■■□ 3.85
TM6SF1-202ENST00000322019 OSCARQ8IYS5 282 aa39.07■■■■□ 3.85
TM6SF1-202ENST00000322019 GPATCH8Q9UKJ3 1502 aaKnown RBP39.07■■■■□ 3.84
TM6SF1-202ENST00000322019 CFDP1Q9UEE9 299 aaPredicted RBP39.02■■■■□ 3.84
TM6SF1-202ENST00000322019 HFM1A2PYH4 1435 aa39■■■■□ 3.83
TM6SF1-202ENST00000322019 ABCC10Q5T3U5 1492 aa39■■■■□ 3.83
TM6SF1-202ENST00000322019 ZNF777Q9ULD5 760 aaPredicted RBP38.99■■■■□ 3.83
TM6SF1-202ENST00000322019 ITSN2Q9NZM3 1697 aa38.98■■■■□ 3.83
TM6SF1-202ENST00000322019 RRP7BPQ9NSQ0 103 aa38.97■■■■□ 3.83
TM6SF1-202ENST00000322019 NAIPQ13075 1403 aa38.96■■■■□ 3.83
TM6SF1-202ENST00000322019 CAMSAP2Q08AD1 1489 aa38.94■■■■□ 3.82
TM6SF1-202ENST00000322019 CDC42BPAQ5VT25 1732 aa38.93■■■■□ 3.82
TM6SF1-202ENST00000322019 DAPK1P53355 1430 aa38.91■■■■□ 3.82
TM6SF1-202ENST00000322019 CLSPNQ9HAW4 1339 aa38.91■■■■□ 3.82
TM6SF1-202ENST00000322019 UHRF1BP1LA0JNW5 1464 aa38.9■■■■□ 3.82
TM6SF1-202ENST00000322019 ABCC5O15440 1437 aa38.89■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms