RNA–Protein interactions for RNA: ENST00000321797.12

LMO7-201, Transcript of LIM domain 7, humanhuman

TSL 5 BASIC

Gene LMO7, Length 5,647 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-201ENST00000321797 ARID4BQ4LE39 1312 aaPredicted RBP13.24□□□□□ -0.29
LMO7-201ENST00000321797 POLR3GLQ9BT43 218 aa13.24□□□□□ -0.29
LMO7-201ENST00000321797 IRX6P78412 446 aaPredicted RBP13.23□□□□□ -0.29
LMO7-201ENST00000321797 HSP90AA1P07900 732 aaKnown RBP13.23□□□□□ -0.29
LMO7-201ENST00000321797 TIMELESSQ9UNS1 1208 aa13.22□□□□□ -0.29
LMO7-201ENST00000321797 CADPSQ9ULU8 1353 aa13.22□□□□□ -0.29
LMO7-201ENST00000321797 LAS1LQ9Y4W2 734 aaKnown RBP13.21□□□□□ -0.3
LMO7-201ENST00000321797 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
LMO7-201ENST00000321797 CEP164Q9UPV0 1460 aa13.17□□□□□ -0.3
LMO7-201ENST00000321797 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
LMO7-201ENST00000321797 NCLP19338 710 aaKnown RBP13.15□□□□□ -0.3
LMO7-201ENST00000321797 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
LMO7-201ENST00000321797 TRIM52Q96A61 297 aa13.15□□□□□ -0.3
LMO7-201ENST00000321797 HSP90AA2PQ14568 343 aaPredicted RBP13.13□□□□□ -0.31
LMO7-201ENST00000321797 UBE2Q2Q8WVN8 375 aa13.13□□□□□ -0.31
LMO7-201ENST00000321797 ARID3CA6NKF2 412 aa13.12□□□□□ -0.31
LMO7-201ENST00000321797 TRIM44Q96DX7 344 aaPredicted RBP13.12□□□□□ -0.31
LMO7-201ENST00000321797 RSPH6AQ9H0K4 717 aa13.12□□□□□ -0.31
LMO7-201ENST00000321797 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
LMO7-201ENST00000321797 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
LMO7-201ENST00000321797 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
LMO7-201ENST00000321797 P3H3Q8IVL6 736 aa13.1□□□□□ -0.31
LMO7-201ENST00000321797 ABCC8Q09428 1581 aa13.1□□□□□ -0.31
LMO7-201ENST00000321797 CYB5RLQ6IPT4 315 aa13.09□□□□□ -0.31
LMO7-201ENST00000321797 HNRNPUQ00839 825 aaKnown RBP eCLIP13.07□□□□□ -0.32
LMO7-201ENST00000321797 WRNQ14191 1432 aaPredicted RBP eCLIP13.07□□□□□ -0.32
LMO7-201ENST00000321797 CC2D2AQ9P2K1 1620 aa13.07□□□□□ -0.32
LMO7-201ENST00000321797 PLEKHD1A6NEE1 506 aa13.07□□□□□ -0.32
LMO7-201ENST00000321797 KCNH8Q96L42 1107 aa13.07□□□□□ -0.32
LMO7-201ENST00000321797 RSF1Q96T23 1441 aaPredicted RBP13.06□□□□□ -0.32
LMO7-201ENST00000321797 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
LMO7-201ENST00000321797 NCAPD3P42695 1498 aa13.06□□□□□ -0.32
LMO7-201ENST00000321797 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
LMO7-201ENST00000321797 ARID3AQ99856 593 aa13.04□□□□□ -0.32
LMO7-201ENST00000321797 CARMIL2Q6F5E8 1435 aa13.03□□□□□ -0.32
LMO7-201ENST00000321797 KIF27Q86VH2 1401 aa13.02□□□□□ -0.33
LMO7-201ENST00000321797 SOGA1O94964 1423 aa13.01□□□□□ -0.33
LMO7-201ENST00000321797 ZNF326Q5BKZ1 582 aaKnown RBP13.01□□□□□ -0.33
LMO7-201ENST00000321797 PDE4CQ08493 712 aa13□□□□□ -0.33
LMO7-201ENST00000321797 PNNQ9H307 717 aaKnown RBP13□□□□□ -0.33
LMO7-201ENST00000321797 DDRGK1Q96HY6 314 aa12.99□□□□□ -0.33
LMO7-201ENST00000321797 FANCD2Q9BXW9 1451 aa12.98□□□□□ -0.33
LMO7-201ENST00000321797 FAM50AQ14320 339 aaKnown RBP12.95□□□□□ -0.34
LMO7-201ENST00000321797 IL27Q8NEV9 243 aa12.95□□□□□ -0.34
LMO7-201ENST00000321797 DDX10Q13206 875 aaKnown RBP12.94□□□□□ -0.34
LMO7-201ENST00000321797 TSPY4P0CV99 314 aa12.92□□□□□ -0.34
LMO7-201ENST00000321797 TSPY10P0CW01 314 aa12.92□□□□□ -0.34
LMO7-201ENST00000321797 MRC2Q9UBG0 1479 aa12.92□□□□□ -0.34
LMO7-201ENST00000321797 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
LMO7-201ENST00000321797 TDRD9Q8NDG6 1382 aaKnown RBP12.9□□□□□ -0.34
LMO7-201ENST00000321797 DNTTIP2Q5QJE6 756 aaKnown RBP12.89□□□□□ -0.35
LMO7-201ENST00000321797 CUX2O14529 1486 aa12.88□□□□□ -0.35
LMO7-201ENST00000321797 MROH2BQ7Z745 1585 aa12.87□□□□□ -0.35
LMO7-201ENST00000321797 L1TD1Q5T7N2 865 aaKnown RBP12.86□□□□□ -0.35
LMO7-201ENST00000321797 FAM9BQ8IZU0 186 aa12.86□□□□□ -0.35
LMO7-201ENST00000321797 UPF2Q9HAU5 1272 aaKnown RBP12.85□□□□□ -0.35
LMO7-201ENST00000321797 PPP4R2Q9NY27 417 aa12.85□□□□□ -0.35
LMO7-201ENST00000321797 B4GALNT3Q6L9W6 998 aa12.83□□□□□ -0.36
LMO7-201ENST00000321797 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.36
LMO7-201ENST00000321797 TNNT3P45378 269 aaPredicted RBP12.83□□□□□ -0.36
LMO7-201ENST00000321797 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
LMO7-201ENST00000321797 CHGAP10645 457 aaKnown RBP12.82□□□□□ -0.36
LMO7-201ENST00000321797 C14orf37Q86TY3 774 aa12.81□□□□□ -0.36
LMO7-201ENST00000321797 HMGXB3Q12766 1538 aa12.81□□□□□ -0.36
LMO7-201ENST00000321797 CANXP27824 592 aaKnown RBP12.8□□□□□ -0.36
LMO7-201ENST00000321797 ZMYND15Q9H091 742 aa12.8□□□□□ -0.36
LMO7-201ENST00000321797 PPP1R15AO75807 674 aaPredicted RBP12.8□□□□□ -0.36
LMO7-201ENST00000321797 JPH4Q96JJ6 628 aa12.8□□□□□ -0.36
LMO7-201ENST00000321797 EEA1Q15075 1411 aa12.8□□□□□ -0.36
LMO7-201ENST00000321797 CARMIL1Q5VZK9 1371 aa12.79□□□□□ -0.36
LMO7-201ENST00000321797 IFT140Q96RY7 1462 aa12.79□□□□□ -0.36
LMO7-201ENST00000321797 USP35Q9P2H5 1018 aa12.78□□□□□ -0.36
LMO7-201ENST00000321797 CCDC88BA6NC98 1476 aa12.78□□□□□ -0.36
LMO7-201ENST00000321797 PTMAP06454 111 aaKnown RBP12.78□□□□□ -0.36
LMO7-201ENST00000321797 BECN1Q14457 450 aa12.78□□□□□ -0.36
LMO7-201ENST00000321797 IPO9Q96P70 1041 aaKnown RBP12.77□□□□□ -0.36
LMO7-201ENST00000321797 FANCIQ9NVI1 1328 aa12.77□□□□□ -0.36
LMO7-201ENST00000321797 FAM69CQ0P6D2 419 aa12.77□□□□□ -0.36
LMO7-201ENST00000321797 MTUS2Q5JR59 1369 aa12.77□□□□□ -0.37
LMO7-201ENST00000321797 APPP05067 770 aa12.77□□□□□ -0.37
LMO7-201ENST00000321797 MSNP26038 577 aaKnown RBP12.77□□□□□ -0.37
LMO7-201ENST00000321797 HDGFP51858 240 aaKnown RBP12.76□□□□□ -0.37
LMO7-201ENST00000321797 GSE1Q14687 1217 aa12.73□□□□□ -0.37
LMO7-201ENST00000321797 MLECQ14165 292 aa12.73□□□□□ -0.37
LMO7-201ENST00000321797 CLIP1P30622 1438 aa12.72□□□□□ -0.37
LMO7-201ENST00000321797 LAMC3Q9Y6N6 1575 aa12.72□□□□□ -0.37
LMO7-201ENST00000321797 BRPF3Q9ULD4 1205 aa12.72□□□□□ -0.37
LMO7-201ENST00000321797 PDIA4P13667 645 aaKnown RBP12.71□□□□□ -0.37
LMO7-201ENST00000321797 ZBTB7CA1YPR0 619 aa12.7□□□□□ -0.38
LMO7-201ENST00000321797 PTPRGP23470 1445 aa12.7□□□□□ -0.38
LMO7-201ENST00000321797 BICRAQ9NZM4 1560 aa12.7□□□□□ -0.38
LMO7-201ENST00000321797 EFCAB2Q5VUJ9 269 aa12.69□□□□□ -0.38
LMO7-201ENST00000321797 CFDP1Q9UEE9 299 aaPredicted RBP12.69□□□□□ -0.38
LMO7-201ENST00000321797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.68□□□□□ -0.381e-7■■□□□ 12.5
LMO7-201ENST00000321797 PTMSP20962 102 aa12.68□□□□□ -0.38
LMO7-201ENST00000321797 GOLGA3Q08378 1498 aa12.66□□□□□ -0.38
LMO7-201ENST00000321797 GRIN2BQ13224 1484 aa12.66□□□□□ -0.38
LMO7-201ENST00000321797 NESP48681 1621 aa12.66□□□□□ -0.38
LMO7-201ENST00000321797 GZF1Q9H116 711 aaPredicted RBP12.66□□□□□ -0.38
LMO7-201ENST00000321797 HAP1P54257 671 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms