RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 EIF4G3O43432 1585 aaKnown RBP27.71■■■□□ 2.03
RAB39A-201ENST00000320578 EFCAB5A4FU69 1503 aa27.71■■■□□ 2.03
RAB39A-201ENST00000320578 APLP2Q06481 763 aa27.64■■■□□ 2.02
RAB39A-201ENST00000320578 MAGI1Q96QZ7 1491 aaPredicted RBP27.64■■■□□ 2.02
RAB39A-201ENST00000320578 PPARGC1BQ86YN6 1023 aaKnown RBP27.62■■■□□ 2.01
RAB39A-201ENST00000320578 SNAPC4Q5SXM2 1469 aa27.61■■■□□ 2.01
RAB39A-201ENST00000320578 SAMD9Q5K651 1589 aa27.54■■■□□ 2
RAB39A-201ENST00000320578 MAP3K1Q13233 1512 aa27.53■■■□□ 2
RAB39A-201ENST00000320578 SYNJ2O15056 1496 aa27.51■■■□□ 2
RAB39A-201ENST00000320578 GRIN2AQ12879 1464 aa27.51■■■□□ 2
RAB39A-201ENST00000320578 IQGAP2Q13576 1575 aa27.49■■□□□ 1.99
RAB39A-201ENST00000320578 KIAA0586Q9BVV6 1533 aa27.47■■□□□ 1.99
RAB39A-201ENST00000320578 FMN1Q68DA7 1419 aa27.47■■□□□ 1.99
RAB39A-201ENST00000320578 FHOD3Q2V2M9 1422 aa27.45■■□□□ 1.99
RAB39A-201ENST00000320578 UGGT2Q9NYU1 1516 aa27.42■■□□□ 1.98
RAB39A-201ENST00000320578 CASKIN1Q8WXD9 1431 aa27.42■■□□□ 1.98
RAB39A-201ENST00000320578 FYCO1Q9BQS8 1478 aa27.41■■□□□ 1.98
RAB39A-201ENST00000320578 CHMP7Q8WUX9 453 aaPredicted RBP27.4■■□□□ 1.98
RAB39A-201ENST00000320578 P3H3Q8IVL6 736 aa27.39■■□□□ 1.97
RAB39A-201ENST00000320578 TIAM1Q13009 1591 aa27.36■■□□□ 1.97
RAB39A-201ENST00000320578 NUP160Q12769 1436 aa27.35■■□□□ 1.97
RAB39A-201ENST00000320578 PCF11O94913 1555 aaKnown RBP27.35■■□□□ 1.97
RAB39A-201ENST00000320578 HRCP23327 699 aa27.34■■□□□ 1.97
RAB39A-201ENST00000320578 TTBK1Q5TCY1 1321 aaPredicted RBP27.33■■□□□ 1.97
RAB39A-201ENST00000320578 KANK4Q5T7N3 995 aaPredicted RBP27.32■■□□□ 1.96
RAB39A-201ENST00000320578 CEP170Q5SW79 1584 aa27.29■■□□□ 1.96
RAB39A-201ENST00000320578 CFAP43Q8NDM7 1665 aa27.28■■□□□ 1.96
RAB39A-201ENST00000320578 LRRC9Q6ZRR7 1453 aa27.25■■□□□ 1.95
RAB39A-201ENST00000320578 DISP1Q96F81 1524 aa27.22■■□□□ 1.95
RAB39A-201ENST00000320578 FBLN2P98095 1184 aa27.2■■□□□ 1.95
RAB39A-201ENST00000320578 KIAA0556O60303 1618 aa27.2■■□□□ 1.94
RAB39A-201ENST00000320578 RRBP1Q9P2E9 1410 aaKnown RBP27.17■■□□□ 1.94
RAB39A-201ENST00000320578 CCDC18Q5T9S5 1454 aa27.12■■□□□ 1.93
RAB39A-201ENST00000320578 JPH4Q96JJ6 628 aa27.12■■□□□ 1.93
RAB39A-201ENST00000320578 CARMIL2Q6F5E8 1435 aa27.11■■□□□ 1.93
RAB39A-201ENST00000320578 ATP1B4Q9UN42 357 aaPredicted RBP27.11■■□□□ 1.93
RAB39A-201ENST00000320578 HECW1Q76N89 1606 aa27.1■■□□□ 1.93
RAB39A-201ENST00000320578 ZEB1P37275 1124 aaPredicted RBP27.06■■□□□ 1.92
RAB39A-201ENST00000320578 CCNB3Q8WWL7 1395 aa27.04■■□□□ 1.92
RAB39A-201ENST00000320578 CHD1O14646 1710 aa27.03■■□□□ 1.92
RAB39A-201ENST00000320578 LRRIQ1Q96JM4 1722 aa27.02■■□□□ 1.92
RAB39A-201ENST00000320578 EPRSP07814 1512 aaKnown RBP27■■□□□ 1.91
RAB39A-201ENST00000320578 MTUS2Q5JR59 1369 aa26.99■■□□□ 1.91
RAB39A-201ENST00000320578 EHBP1L1Q8N3D4 1523 aa26.98■■□□□ 1.91
RAB39A-201ENST00000320578 PHLDB1Q86UU1 1377 aa26.98■■□□□ 1.91
RAB39A-201ENST00000320578 RAPGEF6Q8TEU7 1601 aa26.95■■□□□ 1.9
RAB39A-201ENST00000320578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.94■■□□□ 1.9
RAB39A-201ENST00000320578 SHROOM2Q13796 1616 aa26.93■■□□□ 1.9
RAB39A-201ENST00000320578 HNRNPUL2Q1KMD3 747 aaKnown RBP26.92■■□□□ 1.9
RAB39A-201ENST00000320578 NUP153P49790 1475 aaKnown RBP26.9■■□□□ 1.9
RAB39A-201ENST00000320578 PRG4Q92954 1404 aaPredicted RBP26.9■■□□□ 1.9
RAB39A-201ENST00000320578 ARHGEF11O15085 1522 aa26.88■■□□□ 1.89
RAB39A-201ENST00000320578 SUPT6HQ7KZ85 1726 aaKnown RBP26.87■■□□□ 1.89
RAB39A-201ENST00000320578 NCOA2Q15596 1464 aa26.86■■□□□ 1.89
RAB39A-201ENST00000320578 MAGI3Q5TCQ9 1506 aa26.85■■□□□ 1.89
RAB39A-201ENST00000320578 CDK13Q14004 1512 aaKnown RBP26.84■■□□□ 1.89
RAB39A-201ENST00000320578 CLASP1Q7Z460 1538 aa26.84■■□□□ 1.89
RAB39A-201ENST00000320578 ABCA8O94911 1581 aa26.83■■□□□ 1.89
RAB39A-201ENST00000320578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.83■■□□□ 1.89
RAB39A-201ENST00000320578 CCER1Q8TC90 406 aaPredicted RBP26.81■■□□□ 1.88
RAB39A-201ENST00000320578 CDK11AQ9UQ88 783 aaPredicted RBP26.81■■□□□ 1.88
RAB39A-201ENST00000320578 PLB1Q6P1J6 1458 aa26.81■■□□□ 1.88
RAB39A-201ENST00000320578 FGD6Q6ZV73 1430 aa26.81■■□□□ 1.88
RAB39A-201ENST00000320578 MYOM3Q5VTT5 1437 aa26.8■■□□□ 1.88
RAB39A-201ENST00000320578 PTPRGP23470 1445 aa26.79■■□□□ 1.88
RAB39A-201ENST00000320578 TROQ12816 1431 aaPredicted RBP26.7■■□□□ 1.87
RAB39A-201ENST00000320578 MIA2Q96PC5 1412 aa26.7■■□□□ 1.87
RAB39A-201ENST00000320578 FAM50AQ14320 339 aaKnown RBP26.69■■□□□ 1.86
RAB39A-201ENST00000320578 TCOF1Q13428 1488 aaKnown RBP26.67■■□□□ 1.86
RAB39A-201ENST00000320578 ATP10BO94823 1461 aa26.66■■□□□ 1.86
RAB39A-201ENST00000320578 UACAQ9BZF9 1416 aa26.65■■□□□ 1.86
RAB39A-201ENST00000320578 ARID3CA6NKF2 412 aa26.62■■□□□ 1.85
RAB39A-201ENST00000320578 ADCY10Q96PN6 1610 aa26.62■■□□□ 1.85
RAB39A-201ENST00000320578 PTPN23Q9H3S7 1636 aa26.61■■□□□ 1.85
RAB39A-201ENST00000320578 CLSPNQ9HAW4 1339 aa26.59■■□□□ 1.85
RAB39A-201ENST00000320578 ERCC6L2Q5T890 1561 aa26.59■■□□□ 1.85
RAB39A-201ENST00000320578 SETD5Q9C0A6 1442 aa26.58■■□□□ 1.85
RAB39A-201ENST00000320578 PLEKHD1A6NEE1 506 aa26.58■■□□□ 1.84
RAB39A-201ENST00000320578 ITGAEP38570 1179 aa26.58■■□□□ 1.84
RAB39A-201ENST00000320578 UHRF1BP1LA0JNW5 1464 aa26.55■■□□□ 1.84
RAB39A-201ENST00000320578 ABCC2Q92887 1545 aa26.55■■□□□ 1.84
RAB39A-201ENST00000320578 DHX57Q6P158 1386 aaKnown RBP26.51■■□□□ 1.83
RAB39A-201ENST00000320578 RAB3GAP2Q9H2M9 1393 aa26.51■■□□□ 1.83
RAB39A-201ENST00000320578 OSCARQ8IYS5 282 aa26.51■■□□□ 1.83
RAB39A-201ENST00000320578 PTPRKQ15262 1439 aa26.47■■□□□ 1.83
RAB39A-201ENST00000320578 GPATCH8Q9UKJ3 1502 aaKnown RBP26.47■■□□□ 1.83
RAB39A-201ENST00000320578 KIF14Q15058 1648 aa26.47■■□□□ 1.83
RAB39A-201ENST00000320578 ITSN2Q9NZM3 1697 aa26.46■■□□□ 1.83
RAB39A-201ENST00000320578 HFM1A2PYH4 1435 aa26.46■■□□□ 1.83
RAB39A-201ENST00000320578 ABCC10Q5T3U5 1492 aa26.46■■□□□ 1.83
RAB39A-201ENST00000320578 AKNAQ7Z591 1439 aa26.44■■□□□ 1.82
RAB39A-201ENST00000320578 KDM5BQ9UGL1 1544 aa26.41■■□□□ 1.82
RAB39A-201ENST00000320578 CFDP1Q9UEE9 299 aaPredicted RBP26.38■■□□□ 1.81
RAB39A-201ENST00000320578 NAIPQ13075 1403 aa26.35■■□□□ 1.81
RAB39A-201ENST00000320578 DNMT1P26358 1616 aaKnown RBP26.35■■□□□ 1.81
RAB39A-201ENST00000320578 ROCK1Q13464 1354 aa26.35■■□□□ 1.81
RAB39A-201ENST00000320578 DAPK1P53355 1430 aa26.34■■□□□ 1.81
RAB39A-201ENST00000320578 ACIN1Q9UKV3 1341 aaKnown RBP26.33■■□□□ 1.8
RAB39A-201ENST00000320578 CAMSAP2Q08AD1 1489 aa26.32■■□□□ 1.8
RAB39A-201ENST00000320578 ABCC5O15440 1437 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms