RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 CCDC184Q52MB2 194 aa13.61□□□□□ -0.23
RPGR-201ENST00000318842 ATAD2BQ9ULI0 1458 aa13.6□□□□□ -0.23
RPGR-201ENST00000318842 ARHGAP35Q9NRY4 1499 aa13.59□□□□□ -0.23
RPGR-201ENST00000318842 BICRAQ9NZM4 1560 aa13.59□□□□□ -0.23
RPGR-201ENST00000318842 ARID3CA6NKF2 412 aa13.59□□□□□ -0.23
RPGR-201ENST00000318842 ANP32CO43423 234 aa13.59□□□□□ -0.23
RPGR-201ENST00000318842 CLSPNQ9HAW4 1339 aa13.59□□□□□ -0.23
RPGR-201ENST00000318842 RRBP1Q9P2E9 1410 aaKnown RBP13.59□□□□□ -0.23
RPGR-201ENST00000318842 PRXQ9BXM0 1461 aa13.56□□□□□ -0.24
RPGR-201ENST00000318842 B4GALNT3Q6L9W6 998 aa13.54□□□□□ -0.24
RPGR-201ENST00000318842 FOXD1Q16676 465 aa13.53□□□□□ -0.24
RPGR-201ENST00000318842 CHIC2Q9UKJ5 165 aa13.53□□□□□ -0.24
RPGR-201ENST00000318842 SETD5Q9C0A6 1442 aa13.53□□□□□ -0.24
RPGR-201ENST00000318842 FAM9BQ8IZU0 186 aa13.52□□□□□ -0.25
RPGR-201ENST00000318842 NBR1Q14596 966 aa13.51□□□□□ -0.25
RPGR-201ENST00000318842 CUX1P39880 1505 aa13.51□□□□□ -0.25
RPGR-201ENST00000318842 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
RPGR-201ENST00000318842 ERICH6Q7L0X2 663 aa13.48□□□□□ -0.25
RPGR-201ENST00000318842 POLR3GLQ9BT43 218 aa13.48□□□□□ -0.25
RPGR-201ENST00000318842 RRP7BPQ9NSQ0 103 aa13.46□□□□□ -0.25
RPGR-201ENST00000318842 KIF27Q86VH2 1401 aa13.46□□□□□ -0.25
RPGR-201ENST00000318842 FHOD3Q2V2M9 1422 aa13.46□□□□□ -0.26
RPGR-201ENST00000318842 CUX2O14529 1486 aa13.45□□□□□ -0.26
RPGR-201ENST00000318842 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
RPGR-201ENST00000318842 C11orf95C9JLR9 678 aaPredicted RBP13.42□□□□□ -0.26
RPGR-201ENST00000318842 CDK11AQ9UQ88 783 aaPredicted RBP13.42□□□□□ -0.26
RPGR-201ENST00000318842 PAK3O75914 559 aaPredicted RBP13.41□□□□□ -0.26
RPGR-201ENST00000318842 IGF1RP08069 1367 aa13.41□□□□□ -0.26
RPGR-201ENST00000318842 HSPA5P11021 654 aaKnown RBP13.4□□□□□ -0.26
RPGR-201ENST00000318842 LRRC9Q6ZRR7 1453 aa13.39□□□□□ -0.27
RPGR-201ENST00000318842 WASHC2AQ641Q2 1341 aa13.39□□□□□ -0.27
RPGR-201ENST00000318842 AQRO60306 1485 aaKnown RBP eCLIP13.39□□□□□ -0.279e-8■■■□□ 18.2
RPGR-201ENST00000318842 ERICH3Q5RHP9 1530 aa13.39□□□□□ -0.27
RPGR-201ENST00000318842 PTPRKQ15262 1439 aa13.38□□□□□ -0.27
RPGR-201ENST00000318842 TIAM1Q13009 1591 aa13.37□□□□□ -0.27
RPGR-201ENST00000318842 CARMIL1Q5VZK9 1371 aa13.37□□□□□ -0.27
RPGR-201ENST00000318842 CCER2I3L3R5 266 aa13.36□□□□□ -0.27
RPGR-201ENST00000318842 PEG3Q9GZU2 1588 aa13.36□□□□□ -0.27
RPGR-201ENST00000318842 DEKP35659 375 aaKnown RBP13.34□□□□□ -0.27
RPGR-201ENST00000318842 ZNF326Q5BKZ1 582 aaKnown RBP13.34□□□□□ -0.27
RPGR-201ENST00000318842 SALL2Q9Y467 1007 aaPredicted RBP13.34□□□□□ -0.27
RPGR-201ENST00000318842 MRS2Q9HD23 443 aa13.33□□□□□ -0.27
RPGR-201ENST00000318842 BIVM-ERCC5R4GMW8 1640 aa13.33□□□□□ -0.28
RPGR-201ENST00000318842 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
RPGR-201ENST00000318842 PCF11O94913 1555 aaKnown RBP13.32□□□□□ -0.28
RPGR-201ENST00000318842 SKAP1Q86WV1 359 aa13.3□□□□□ -0.28
RPGR-201ENST00000318842 NPM2Q86SE8 214 aaKnown RBP13.29□□□□□ -0.28
RPGR-201ENST00000318842 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
RPGR-201ENST00000318842 CCDC18Q5T9S5 1454 aa13.28□□□□□ -0.28
RPGR-201ENST00000318842 AKNAQ7Z591 1439 aa13.27□□□□□ -0.28
RPGR-201ENST00000318842 L3MBTL2Q969R5 705 aa13.26□□□□□ -0.29
RPGR-201ENST00000318842 MTUS2Q5JR59 1369 aa13.26□□□□□ -0.29
RPGR-201ENST00000318842 FGD5Q6ZNL6 1462 aa13.25□□□□□ -0.29
RPGR-201ENST00000318842 NBPF8Q3BBV2 869 aa13.24□□□□□ -0.29
RPGR-201ENST00000318842 FANCIQ9NVI1 1328 aa13.24□□□□□ -0.29
RPGR-201ENST00000318842 PPP4R2Q9NY27 417 aa13.24□□□□□ -0.29
RPGR-201ENST00000318842 CCDC136Q96JN2 1154 aa13.23□□□□□ -0.29
RPGR-201ENST00000318842 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
RPGR-201ENST00000318842 PRKRIP1Q9H875 184 aaPredicted RBP13.22□□□□□ -0.29
RPGR-201ENST00000318842 FGD6Q6ZV73 1430 aa13.21□□□□□ -0.29
RPGR-201ENST00000318842 EIF4G2P78344 907 aaKnown RBP eCLIP13.2□□□□□ -0.3
RPGR-201ENST00000318842 LAS1LQ9Y4W2 734 aaKnown RBP13.2□□□□□ -0.3
RPGR-201ENST00000318842 IL27Q8NEV9 243 aa13.19□□□□□ -0.3
RPGR-201ENST00000318842 NOP58Q9Y2X3 529 aaKnown RBP13.18□□□□□ -0.3
RPGR-201ENST00000318842 CFTRP13569 1480 aa13.18□□□□□ -0.3
RPGR-201ENST00000318842 NAIPQ13075 1403 aa13.17□□□□□ -0.3
RPGR-201ENST00000318842 TDRD9Q8NDG6 1382 aaKnown RBP13.17□□□□□ -0.3
RPGR-201ENST00000318842 ZNF644Q9H582 1327 aaPredicted RBP13.17□□□□□ -0.3
RPGR-201ENST00000318842 KDM5BQ9UGL1 1544 aa13.17□□□□□ -0.3
RPGR-201ENST00000318842 KDM6BO15054 1643 aa13.16□□□□□ -0.3
RPGR-201ENST00000318842 FHAD1B1AJZ9 1412 aa13.15□□□□□ -0.3
RPGR-201ENST00000318842 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.31
RPGR-201ENST00000318842 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.15□□□□□ -0.31
RPGR-201ENST00000318842 KIF7Q2M1P5 1343 aa13.14□□□□□ -0.31
RPGR-201ENST00000318842 UACAQ9BZF9 1416 aa13.14□□□□□ -0.31
RPGR-201ENST00000318842 DNAJC5BQ9UF47 199 aa13.14□□□□□ -0.31
RPGR-201ENST00000318842 DENND4BO75064 1496 aaPredicted RBP13.13□□□□□ -0.31
RPGR-201ENST00000318842 TIMELESSQ9UNS1 1208 aa13.12□□□□□ -0.31
RPGR-201ENST00000318842 PTPN23Q9H3S7 1636 aa13.12□□□□□ -0.31
RPGR-201ENST00000318842 NESP48681 1621 aa13.12□□□□□ -0.31
RPGR-201ENST00000318842 CCDC7Q96M83 1385 aa13.11□□□□□ -0.31
RPGR-201ENST00000318842 HFM1A2PYH4 1435 aa13.11□□□□□ -0.31
RPGR-201ENST00000318842 NCOA2Q15596 1464 aa13.1□□□□□ -0.31
RPGR-201ENST00000318842 CNTLNQ9NXG0 1405 aa13.1□□□□□ -0.31
RPGR-201ENST00000318842 PLIN1O60240 522 aa13.09□□□□□ -0.31
RPGR-201ENST00000318842 KDM2AQ9Y2K7 1162 aa13.09□□□□□ -0.31
RPGR-201ENST00000318842 SLC4A3P48751 1232 aa13.08□□□□□ -0.31
RPGR-201ENST00000318842 NCAPD3P42695 1498 aa13.08□□□□□ -0.31
RPGR-201ENST00000318842 CFAP43Q8NDM7 1665 aa13.08□□□□□ -0.32
RPGR-201ENST00000318842 ZNF777Q9ULD5 760 aaPredicted RBP13.08□□□□□ -0.32
RPGR-201ENST00000318842 SLC4A1APQ9BWU0 796 aaKnown RBP13.07□□□□□ -0.32
RPGR-201ENST00000318842 ZBED9Q6R2W3 1325 aa13.07□□□□□ -0.32
RPGR-201ENST00000318842 CASKIN1Q8WXD9 1431 aa13.07□□□□□ -0.32
RPGR-201ENST00000318842 EXOC6Q8TAG9 804 aa13.07□□□□□ -0.32
RPGR-201ENST00000318842 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
RPGR-201ENST00000318842 FMN1Q68DA7 1419 aa13.05□□□□□ -0.32
RPGR-201ENST00000318842 MAGI3Q5TCQ9 1506 aa13.05□□□□□ -0.32
RPGR-201ENST00000318842 ZBTB47Q9UFB7 747 aaPredicted RBP13.04□□□□□ -0.32
RPGR-201ENST00000318842 FYCO1Q9BQS8 1478 aa13.04□□□□□ -0.32
RPGR-201ENST00000318842 MYOM3Q5VTT5 1437 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms