RNA–Protein interactions for RNA: ENST00000317620.13

PROM2-201, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-201ENST00000317620 BAZ1AQ9NRL2 1556 aaPredicted RBP18.35■□□□□ 0.53
PROM2-201ENST00000317620 MRS2Q9HD23 443 aa18.34■□□□□ 0.53
PROM2-201ENST00000317620 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.53
PROM2-201ENST00000317620 EIF4G2P78344 907 aaKnown RBP eCLIP18.32■□□□□ 0.52
PROM2-201ENST00000317620 ANP32AP39687 249 aaKnown RBP18.31■□□□□ 0.52
PROM2-201ENST00000317620 NPM2Q86SE8 214 aaKnown RBP18.3■□□□□ 0.52
PROM2-201ENST00000317620 CFDP1Q9UEE9 299 aaPredicted RBP18.28■□□□□ 0.52
PROM2-201ENST00000317620 RGL3Q3MIN7 710 aa18.24■□□□□ 0.51
PROM2-201ENST00000317620 WDR43Q15061 677 aaKnown RBP eCLIP18.23■□□□□ 0.51
PROM2-201ENST00000317620 SOGA1O94964 1423 aa18.21■□□□□ 0.51
PROM2-201ENST00000317620 CCDC136Q96JN2 1154 aa18.19■□□□□ 0.5
PROM2-201ENST00000317620 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
PROM2-201ENST00000317620 CARMIL1Q5VZK9 1371 aa18.15■□□□□ 0.5
PROM2-201ENST00000317620 SIN3AQ96ST3 1273 aa18.15■□□□□ 0.5
PROM2-201ENST00000317620 MROH2BQ7Z745 1585 aa18.15■□□□□ 0.5
PROM2-201ENST00000317620 IRX6P78412 446 aaPredicted RBP18.14■□□□□ 0.49
PROM2-201ENST00000317620 SCAF1Q9H7N4 1312 aaKnown RBP18.14■□□□□ 0.49
PROM2-201ENST00000317620 CUX2O14529 1486 aa18.12■□□□□ 0.49
PROM2-201ENST00000317620 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.12■□□□□ 0.49
PROM2-201ENST00000317620 CCDC88BA6NC98 1476 aa18.09■□□□□ 0.49
PROM2-201ENST00000317620 ERCC6Q03468 1493 aa18.09■□□□□ 0.49
PROM2-201ENST00000317620 UPF2Q9HAU5 1272 aaKnown RBP18.07■□□□□ 0.48
PROM2-201ENST00000317620 CCNB3Q8WWL7 1395 aa18.07■□□□□ 0.48
PROM2-201ENST00000317620 PPP1R15AO75807 674 aaPredicted RBP18.06■□□□□ 0.48
PROM2-201ENST00000317620 CARD11Q9BXL7 1154 aa18.06■□□□□ 0.48
PROM2-201ENST00000317620 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
PROM2-201ENST00000317620 SENP3-EIF4A1A0A087X0R7 540 aa18.05■□□□□ 0.48
PROM2-201ENST00000317620 HSP90AA1P07900 732 aaKnown RBP18.05■□□□□ 0.48
PROM2-201ENST00000317620 ABCC8Q09428 1581 aa18■□□□□ 0.47
PROM2-201ENST00000317620 CDCA8Q53HL2 280 aa17.98■□□□□ 0.47
PROM2-201ENST00000317620 KANK4Q5T7N3 995 aaPredicted RBP17.98■□□□□ 0.47
PROM2-201ENST00000317620 KNSTRNQ9Y448 316 aa17.98■□□□□ 0.47
PROM2-201ENST00000317620 VPS8Q8N3P4 1428 aa17.96■□□□□ 0.47
PROM2-201ENST00000317620 EIF4G1Q04637 1599 aaKnown RBP17.95■□□□□ 0.46
PROM2-201ENST00000317620 PLEKHG5O94827 1062 aa17.95■□□□□ 0.46
PROM2-201ENST00000317620 ARID4BQ4LE39 1312 aaPredicted RBP17.94■□□□□ 0.46
PROM2-201ENST00000317620 TDRD9Q8NDG6 1382 aaKnown RBP17.92■□□□□ 0.46
PROM2-201ENST00000317620 C14orf37Q86TY3 774 aa17.92■□□□□ 0.46
PROM2-201ENST00000317620 SMARCA2P51531 1590 aa17.9■□□□□ 0.46
PROM2-201ENST00000317620 SUPT16HQ9Y5B9 1047 aaKnown RBP17.9■□□□□ 0.46
PROM2-201ENST00000317620 CFAP53Q96M91 514 aa17.89■□□□□ 0.45
PROM2-201ENST00000317620 ZBTB7CA1YPR0 619 aa17.89■□□□□ 0.45
PROM2-201ENST00000317620 DCAF11Q8TEB1 546 aa17.88■□□□□ 0.45
PROM2-201ENST00000317620 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
PROM2-201ENST00000317620 TIMELESSQ9UNS1 1208 aa17.87■□□□□ 0.45
PROM2-201ENST00000317620 PDS5BQ9NTI5 1447 aa17.85■□□□□ 0.45
PROM2-201ENST00000317620 NBR1Q14596 966 aa17.84■□□□□ 0.45
PROM2-201ENST00000317620 SETD5Q9C0A6 1442 aa17.84■□□□□ 0.45
PROM2-201ENST00000317620 NEUROD2Q15784 382 aa17.84■□□□□ 0.45
PROM2-201ENST00000317620 MYH16Q9H6N6 1097 aa17.84■□□□□ 0.45
PROM2-201ENST00000317620 POGKQ9P215 609 aa17.82■□□□□ 0.44
PROM2-201ENST00000317620 ANP32BQ92688 251 aaKnown RBP17.82■□□□□ 0.44
PROM2-201ENST00000317620 WIZO95785 1651 aa17.82■□□□□ 0.44
PROM2-201ENST00000317620 ARHGAP35Q9NRY4 1499 aa17.81■□□□□ 0.44
PROM2-201ENST00000317620 FOXD1Q16676 465 aa17.8■□□□□ 0.44
PROM2-201ENST00000317620 CC2D1BQ5T0F9 858 aaKnown RBP17.8■□□□□ 0.44
PROM2-201ENST00000317620 TNNT2P45379 298 aaPredicted RBP17.79■□□□□ 0.44
PROM2-201ENST00000317620 A0A0G2JS52 829 aa17.79■□□□□ 0.44
PROM2-201ENST00000317620 PKD2Q13563 968 aa17.79■□□□□ 0.44
PROM2-201ENST00000317620 TOP2AP11388 1531 aaKnown RBP17.78■□□□□ 0.44
PROM2-201ENST00000317620 CADPSQ9ULU8 1353 aa17.78■□□□□ 0.44
PROM2-201ENST00000317620 TMF1P82094 1093 aa17.76■□□□□ 0.43
PROM2-201ENST00000317620 FMN1Q68DA7 1419 aa17.75■□□□□ 0.43
PROM2-201ENST00000317620 CARMIL2Q6F5E8 1435 aa17.75■□□□□ 0.43
PROM2-201ENST00000317620 NUDCQ9Y266 331 aa17.74■□□□□ 0.43
PROM2-201ENST00000317620 HSPA5P11021 654 aaKnown RBP17.74■□□□□ 0.43
PROM2-201ENST00000317620 RAB3GAP2Q9H2M9 1393 aa17.74■□□□□ 0.43
PROM2-201ENST00000317620 MAPK8IP3Q9UPT6 1336 aa17.73■□□□□ 0.43
PROM2-201ENST00000317620 GGT6Q6P531 493 aa17.72■□□□□ 0.43
PROM2-201ENST00000317620 KANK1Q14678 1352 aa17.72■□□□□ 0.43
PROM2-201ENST00000317620 MLECQ14165 292 aa17.72■□□□□ 0.43
PROM2-201ENST00000317620 MPHOSPH9Q99550 1183 aa17.71■□□□□ 0.43
PROM2-201ENST00000317620 ARXQ96QS3 562 aa17.71■□□□□ 0.43
PROM2-201ENST00000317620 ATAD2BQ9ULI0 1458 aa17.71■□□□□ 0.43
PROM2-201ENST00000317620 LAS1LQ9Y4W2 734 aaKnown RBP17.7■□□□□ 0.42
PROM2-201ENST00000317620 FTSJ3Q8IY81 847 aaKnown RBP17.69■□□□□ 0.42
PROM2-201ENST00000317620 U2SURPO15042 1029 aaKnown RBP17.68■□□□□ 0.42
PROM2-201ENST00000317620 PPP4R2Q9NY27 417 aa17.67■□□□□ 0.42
PROM2-201ENST00000317620 RAPGEF2Q9Y4G8 1499 aa17.67■□□□□ 0.42
PROM2-201ENST00000317620 EFCAB2Q5VUJ9 269 aa17.67■□□□□ 0.42
PROM2-201ENST00000317620 LMOD2Q6P5Q4 547 aa17.67■□□□□ 0.42
PROM2-201ENST00000317620 FHOD3Q2V2M9 1422 aa17.67■□□□□ 0.42
PROM2-201ENST00000317620 FRAT1Q92837 279 aaPredicted RBP17.67■□□□□ 0.42
PROM2-201ENST00000317620 NUP155O75694 1391 aa17.67■□□□□ 0.42
PROM2-201ENST00000317620 HAP1P54257 671 aaPredicted RBP17.66■□□□□ 0.42
PROM2-201ENST00000317620 SAFB2Q14151 953 aaKnown RBP eCLIP17.66■□□□□ 0.42
PROM2-201ENST00000317620 CCER2I3L3R5 266 aa17.65■□□□□ 0.42
PROM2-201ENST00000317620 SRPK2P78362 688 aaKnown RBP17.63■□□□□ 0.41
PROM2-201ENST00000317620 BECN1Q14457 450 aa17.63■□□□□ 0.41
PROM2-201ENST00000317620 DDRGK1Q96HY6 314 aa17.62■□□□□ 0.41
PROM2-201ENST00000317620 RUSC2Q8N2Y8 1516 aa17.62■□□□□ 0.41
PROM2-201ENST00000317620 B4GALNT3Q6L9W6 998 aa17.62■□□□□ 0.41
PROM2-201ENST00000317620 RGS3P49796 1198 aa17.61■□□□□ 0.41
PROM2-201ENST00000317620 ANKRD30AQ9BXX3 1397 aa17.61■□□□□ 0.41
PROM2-201ENST00000317620 EIF5BO60841 1220 aaKnown RBP17.61■□□□□ 0.41
PROM2-201ENST00000317620 JPH4Q96JJ6 628 aa17.6■□□□□ 0.41
PROM2-201ENST00000317620 HNRNPMP52272 730 aaKnown RBP eCLIP17.59■□□□□ 0.41
PROM2-201ENST00000317620 TRHP20396 242 aaPredicted RBP17.59■□□□□ 0.41
PROM2-201ENST00000317620 MORC1Q86VD1 984 aa17.59■□□□□ 0.41
PROM2-201ENST00000317620 L3MBTL2Q969R5 705 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms