RNA–Protein interactions for RNA: ENST00000316856.7

RAD23A-201, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAD23A, Length 1,736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-201ENST00000316856 ADAMTS12P58397 1594 aa28.21■■■□□ 2.11
RAD23A-201ENST00000316856 CTTNBP2Q8WZ74 1663 aa28.19■■■□□ 2.1
RAD23A-201ENST00000316856 FHAD1B1AJZ9 1412 aa28.17■■■□□ 2.1
RAD23A-201ENST00000316856 SNAPC4Q5SXM2 1469 aa28.08■■■□□ 2.09
RAD23A-201ENST00000316856 TTBK1Q5TCY1 1321 aaPredicted RBP27.99■■■□□ 2.07
RAD23A-201ENST00000316856 EFCAB5A4FU69 1503 aa27.99■■■□□ 2.07
RAD23A-201ENST00000316856 MAGI1Q96QZ7 1491 aaPredicted RBP27.97■■■□□ 2.07
RAD23A-201ENST00000316856 P3H3Q8IVL6 736 aa27.93■■■□□ 2.06
RAD23A-201ENST00000316856 SAMD9Q5K651 1589 aa27.93■■■□□ 2.06
RAD23A-201ENST00000316856 FHOD3Q2V2M9 1422 aa27.93■■■□□ 2.06
RAD23A-201ENST00000316856 GRIN2AQ12879 1464 aa27.92■■■□□ 2.06
RAD23A-201ENST00000316856 IQGAP2Q13576 1575 aa27.88■■■□□ 2.05
RAD23A-201ENST00000316856 SYNJ2O15056 1496 aa27.88■■■□□ 2.05
RAD23A-201ENST00000316856 APLP2Q06481 763 aa27.88■■■□□ 2.05
RAD23A-201ENST00000316856 PCF11O94913 1555 aaKnown RBP27.82■■■□□ 2.04
RAD23A-201ENST00000316856 KIAA0586Q9BVV6 1533 aa27.8■■■□□ 2.04
RAD23A-201ENST00000316856 KANK4Q5T7N3 995 aaPredicted RBP27.78■■■□□ 2.04
RAD23A-201ENST00000316856 CHMP7Q8WUX9 453 aaPredicted RBP27.78■■■□□ 2.04
RAD23A-201ENST00000316856 CEP170Q5SW79 1584 aa27.78■■■□□ 2.04
RAD23A-201ENST00000316856 UGGT2Q9NYU1 1516 aa27.76■■■□□ 2.03
RAD23A-201ENST00000316856 MAP3K1Q13233 1512 aa27.73■■■□□ 2.03
RAD23A-201ENST00000316856 TIAM1Q13009 1591 aa27.73■■■□□ 2.03
RAD23A-201ENST00000316856 CASKIN1Q8WXD9 1431 aa27.73■■■□□ 2.03
RAD23A-201ENST00000316856 NUP160Q12769 1436 aa27.72■■■□□ 2.03
RAD23A-201ENST00000316856 FMN1Q68DA7 1419 aa27.72■■■□□ 2.03
RAD23A-201ENST00000316856 FYCO1Q9BQS8 1478 aa27.72■■■□□ 2.03
RAD23A-201ENST00000316856 FBLN2P98095 1184 aa27.71■■■□□ 2.03
RAD23A-201ENST00000316856 CFAP43Q8NDM7 1665 aa27.68■■■□□ 2.02
RAD23A-201ENST00000316856 DISP1Q96F81 1524 aa27.65■■■□□ 2.02
RAD23A-201ENST00000316856 KIAA0556O60303 1618 aa27.62■■■□□ 2.01
RAD23A-201ENST00000316856 HRCP23327 699 aa27.61■■■□□ 2.01
RAD23A-201ENST00000316856 CHD1O14646 1710 aa27.6■■■□□ 2.01
RAD23A-201ENST00000316856 LRRC9Q6ZRR7 1453 aa27.59■■■□□ 2.01
RAD23A-201ENST00000316856 LRRIQ1Q96JM4 1722 aa27.59■■■□□ 2.01
RAD23A-201ENST00000316856 ATP1B4Q9UN42 357 aaPredicted RBP27.59■■■□□ 2.01
RAD23A-201ENST00000316856 JPH4Q96JJ6 628 aa27.49■■□□□ 1.99
RAD23A-201ENST00000316856 RRBP1Q9P2E9 1410 aaKnown RBP27.45■■□□□ 1.99
RAD23A-201ENST00000316856 HECW1Q76N89 1606 aa27.45■■□□□ 1.98
RAD23A-201ENST00000316856 PHLDB1Q86UU1 1377 aa27.39■■□□□ 1.97
RAD23A-201ENST00000316856 CARMIL2Q6F5E8 1435 aa27.39■■□□□ 1.97
RAD23A-201ENST00000316856 CCDC18Q5T9S5 1454 aa27.38■■□□□ 1.97
RAD23A-201ENST00000316856 EPRSP07814 1512 aaKnown RBP27.37■■□□□ 1.97
RAD23A-201ENST00000316856 HNRNPUL2Q1KMD3 747 aaKnown RBP27.36■■□□□ 1.97
RAD23A-201ENST00000316856 RAPGEF6Q8TEU7 1601 aa27.36■■□□□ 1.97
RAD23A-201ENST00000316856 MAGI3Q5TCQ9 1506 aa27.35■■□□□ 1.97
RAD23A-201ENST00000316856 CDK13Q14004 1512 aaKnown RBP27.34■■□□□ 1.97
RAD23A-201ENST00000316856 CCNB3Q8WWL7 1395 aa27.33■■□□□ 1.97
RAD23A-201ENST00000316856 SHROOM2Q13796 1616 aa27.33■■□□□ 1.97
RAD23A-201ENST00000316856 NUP153P49790 1475 aaKnown RBP27.32■■□□□ 1.96
RAD23A-201ENST00000316856 PRG4Q92954 1404 aaPredicted RBP27.32■■□□□ 1.96
RAD23A-201ENST00000316856 MTUS2Q5JR59 1369 aa27.32■■□□□ 1.96
RAD23A-201ENST00000316856 EHBP1L1Q8N3D4 1523 aa27.3■■□□□ 1.96
RAD23A-201ENST00000316856 PLB1Q6P1J6 1458 aa27.28■■□□□ 1.96
RAD23A-201ENST00000316856 CLASP1Q7Z460 1538 aa27.28■■□□□ 1.96
RAD23A-201ENST00000316856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.27■■□□□ 1.96
RAD23A-201ENST00000316856 ARID3CA6NKF2 412 aa27.25■■□□□ 1.95
RAD23A-201ENST00000316856 SUPT6HQ7KZ85 1726 aaKnown RBP27.23■■□□□ 1.95
RAD23A-201ENST00000316856 NCOA2Q15596 1464 aa27.23■■□□□ 1.95
RAD23A-201ENST00000316856 ABCA8O94911 1581 aa27.22■■□□□ 1.95
RAD23A-201ENST00000316856 ARHGEF11O15085 1522 aa27.22■■□□□ 1.95
RAD23A-201ENST00000316856 ERCC6L2Q5T890 1561 aa27.2■■□□□ 1.94
RAD23A-201ENST00000316856 PTPRGP23470 1445 aa27.14■■□□□ 1.94
RAD23A-201ENST00000316856 FGD6Q6ZV73 1430 aa27.14■■□□□ 1.94
RAD23A-201ENST00000316856 CCER1Q8TC90 406 aaPredicted RBP27.12■■□□□ 1.93
RAD23A-201ENST00000316856 MYOM3Q5VTT5 1437 aa27.11■■□□□ 1.93
RAD23A-201ENST00000316856 ZEB1P37275 1124 aaPredicted RBP27.1■■□□□ 1.93
RAD23A-201ENST00000316856 FAM50AQ14320 339 aaKnown RBP27.09■■□□□ 1.93
RAD23A-201ENST00000316856 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.09■■□□□ 1.933e-7■■■□□ 14.6
RAD23A-201ENST00000316856 ITGAEP38570 1179 aa27.07■■□□□ 1.92
RAD23A-201ENST00000316856 ATP10BO94823 1461 aa27.05■■□□□ 1.92
RAD23A-201ENST00000316856 TROQ12816 1431 aaPredicted RBP27.02■■□□□ 1.92
RAD23A-201ENST00000316856 CDK11AQ9UQ88 783 aaPredicted RBP27.01■■□□□ 1.91
RAD23A-201ENST00000316856 UACAQ9BZF9 1416 aa27■■□□□ 1.91
RAD23A-201ENST00000316856 PTPN23Q9H3S7 1636 aa27■■□□□ 1.91
RAD23A-201ENST00000316856 ADCY10Q96PN6 1610 aa26.97■■□□□ 1.91
RAD23A-201ENST00000316856 TCOF1Q13428 1488 aaKnown RBP26.96■■□□□ 1.91
RAD23A-201ENST00000316856 KIF14Q15058 1648 aa26.96■■□□□ 1.91
RAD23A-201ENST00000316856 ABCC2Q92887 1545 aa26.92■■□□□ 1.9
RAD23A-201ENST00000316856 MIA2Q96PC5 1412 aa26.92■■□□□ 1.9
RAD23A-201ENST00000316856 PTPRKQ15262 1439 aa26.92■■□□□ 1.9
RAD23A-201ENST00000316856 PLEKHD1A6NEE1 506 aa26.87■■□□□ 1.89
RAD23A-201ENST00000316856 OSCARQ8IYS5 282 aa26.87■■□□□ 1.89
RAD23A-201ENST00000316856 RAB3GAP2Q9H2M9 1393 aa26.87■■□□□ 1.89
RAD23A-201ENST00000316856 SETD5Q9C0A6 1442 aa26.86■■□□□ 1.89
RAD23A-201ENST00000316856 DHX57Q6P158 1386 aaKnown RBP26.85■■□□□ 1.89
RAD23A-201ENST00000316856 UHRF1BP1LA0JNW5 1464 aa26.84■■□□□ 1.89
RAD23A-201ENST00000316856 ABCC10Q5T3U5 1492 aa26.83■■□□□ 1.89
RAD23A-201ENST00000316856 GPATCH8Q9UKJ3 1502 aaKnown RBP26.83■■□□□ 1.88
RAD23A-201ENST00000316856 ITSN2Q9NZM3 1697 aa26.8■■□□□ 1.88
RAD23A-201ENST00000316856 ZCCHC11Q5TAX3 1644 aaKnown RBP26.76■■□□□ 1.88
RAD23A-201ENST00000316856 CDC42BPAQ5VT25 1732 aa26.76■■□□□ 1.88
RAD23A-201ENST00000316856 ZNF644Q9H582 1327 aaPredicted RBP26.76■■□□□ 1.88
RAD23A-201ENST00000316856 KDM5BQ9UGL1 1544 aa26.75■■□□□ 1.87
RAD23A-201ENST00000316856 HFM1A2PYH4 1435 aa26.72■■□□□ 1.87
RAD23A-201ENST00000316856 CAMSAP2Q08AD1 1489 aa26.71■■□□□ 1.87
RAD23A-201ENST00000316856 DNMT1P26358 1616 aaKnown RBP26.71■■□□□ 1.87
RAD23A-201ENST00000316856 CFDP1Q9UEE9 299 aaPredicted RBP26.7■■□□□ 1.87
RAD23A-201ENST00000316856 NAIPQ13075 1403 aa26.7■■□□□ 1.86
RAD23A-201ENST00000316856 ABCC5O15440 1437 aa26.68■■□□□ 1.86
RAD23A-201ENST00000316856 DAPK1P53355 1430 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms