RNA–Protein interactions for RNA: ENST00000316848.9

MINDY2-201, Transcript of MINDY lysine 48 deubiquitinase 2, humanhuman

TSL 1 (best)

Gene MINDY2, Length 4,866 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY2-201ENST00000316848 CEP162Q5TB80 1403 aa23.98■■□□□ 1.43
MINDY2-201ENST00000316848 HIRIP3Q9BW71 556 aaPredicted RBP23.97■■□□□ 1.43
MINDY2-201ENST00000316848 WRNQ14191 1432 aaPredicted RBP eCLIP23.96■■□□□ 1.43
MINDY2-201ENST00000316848 KCNH8Q96L42 1107 aa23.95■■□□□ 1.42
MINDY2-201ENST00000316848 MYH16Q9H6N6 1097 aa23.91■■□□□ 1.42
MINDY2-201ENST00000316848 KIF27Q86VH2 1401 aa23.9■■□□□ 1.42
MINDY2-201ENST00000316848 PPP1R15AO75807 674 aaPredicted RBP23.88■■□□□ 1.41
MINDY2-201ENST00000316848 CFDP1Q9UEE9 299 aaPredicted RBP23.88■■□□□ 1.41
MINDY2-201ENST00000316848 CDCA8Q53HL2 280 aa23.87■■□□□ 1.41
MINDY2-201ENST00000316848 RGL3Q3MIN7 710 aa23.85■■□□□ 1.41
MINDY2-201ENST00000316848 TNIKQ9UKE5 1360 aa23.85■■□□□ 1.41
MINDY2-201ENST00000316848 BAZ1BQ9UIG0 1483 aaKnown RBP23.84■■□□□ 1.41
MINDY2-201ENST00000316848 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
MINDY2-201ENST00000316848 SCAF1Q9H7N4 1312 aaKnown RBP23.8■■□□□ 1.4
MINDY2-201ENST00000316848 IRX6P78412 446 aaPredicted RBP23.8■■□□□ 1.4
MINDY2-201ENST00000316848 CFAP53Q96M91 514 aa23.79■■□□□ 1.4
MINDY2-201ENST00000316848 NACADO15069 1562 aa23.79■■□□□ 1.4
MINDY2-201ENST00000316848 EIF5BO60841 1220 aaKnown RBP23.78■■□□□ 1.4
MINDY2-201ENST00000316848 KNSTRNQ9Y448 316 aa23.76■■□□□ 1.39
MINDY2-201ENST00000316848 NBR1Q14596 966 aa23.74■■□□□ 1.39
MINDY2-201ENST00000316848 CARD11Q9BXL7 1154 aa23.73■■□□□ 1.39
MINDY2-201ENST00000316848 C14orf37Q86TY3 774 aa23.72■■□□□ 1.39
MINDY2-201ENST00000316848 MYO15BQ96JP2 1530 aa23.7■■□□□ 1.38
MINDY2-201ENST00000316848 BECN1Q14457 450 aa23.67■■□□□ 1.38
MINDY2-201ENST00000316848 SENP3Q9H4L4 574 aaPredicted RBP23.67■■□□□ 1.38
MINDY2-201ENST00000316848 DDRGK1Q96HY6 314 aa23.65■■□□□ 1.38
MINDY2-201ENST00000316848 ZBTB7CA1YPR0 619 aa23.65■■□□□ 1.38
MINDY2-201ENST00000316848 A0A0G2JS52 829 aa23.65■■□□□ 1.38
MINDY2-201ENST00000316848 ARXQ96QS3 562 aa23.6■■□□□ 1.37
MINDY2-201ENST00000316848 ARID4BQ4LE39 1312 aaPredicted RBP23.6■■□□□ 1.37
MINDY2-201ENST00000316848 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
MINDY2-201ENST00000316848 BAZ1AQ9NRL2 1556 aaPredicted RBP23.58■■□□□ 1.36
MINDY2-201ENST00000316848 PLEKHG5O94827 1062 aa23.58■■□□□ 1.36
MINDY2-201ENST00000316848 NUDCQ9Y266 331 aa23.58■■□□□ 1.36
MINDY2-201ENST00000316848 ANP32EQ9BTT0 268 aa23.57■■□□□ 1.36
MINDY2-201ENST00000316848 PPM1GO15355 546 aaPredicted RBP23.56■■□□□ 1.36
MINDY2-201ENST00000316848 SIN3AQ96ST3 1273 aa23.55■■□□□ 1.36
MINDY2-201ENST00000316848 MAPK8IP3Q9UPT6 1336 aa23.54■■□□□ 1.36
MINDY2-201ENST00000316848 CCNB3Q8WWL7 1395 aa23.54■■□□□ 1.36
MINDY2-201ENST00000316848 NCLP19338 710 aaKnown RBP23.53■■□□□ 1.36
MINDY2-201ENST00000316848 SUPT16HQ9Y5B9 1047 aaKnown RBP23.53■■□□□ 1.36
MINDY2-201ENST00000316848 GOLGA6L22H0YM25 854 aa23.53■■□□□ 1.36
MINDY2-201ENST00000316848 FTSJ3Q8IY81 847 aaKnown RBP23.53■■□□□ 1.36
MINDY2-201ENST00000316848 POGKQ9P215 609 aa23.52■■□□□ 1.36
MINDY2-201ENST00000316848 TIMELESSQ9UNS1 1208 aa23.51■■□□□ 1.35
MINDY2-201ENST00000316848 GLIPR1L2Q4G1C9 344 aa23.5■■□□□ 1.35
MINDY2-201ENST00000316848 HAP1P54257 671 aaPredicted RBP23.5■■□□□ 1.35
MINDY2-201ENST00000316848 CARMIL1Q5VZK9 1371 aa23.48■■□□□ 1.35
MINDY2-201ENST00000316848 NEUROD2Q15784 382 aa23.48■■□□□ 1.35
MINDY2-201ENST00000316848 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
MINDY2-201ENST00000316848 SENP3-EIF4A1A0A087X0R7 540 aa23.45■■□□□ 1.34
MINDY2-201ENST00000316848 CASC1Q6TDU7 716 aa23.44■■□□□ 1.34
MINDY2-201ENST00000316848 CHMP4BQ9H444 224 aaKnown RBP23.43■■□□□ 1.34
MINDY2-201ENST00000316848 PPP4R2Q9NY27 417 aa23.42■■□□□ 1.34
MINDY2-201ENST00000316848 TMF1P82094 1093 aa23.41■■□□□ 1.34
MINDY2-201ENST00000316848 CDK11BP21127 795 aaKnown RBP23.41■■□□□ 1.34
MINDY2-201ENST00000316848 CUX2O14529 1486 aa23.4■■□□□ 1.34
MINDY2-201ENST00000316848 MS4A1P11836 297 aa23.4■■□□□ 1.34
MINDY2-201ENST00000316848 TRIM44Q96DX7 344 aaPredicted RBP23.39■■□□□ 1.33
MINDY2-201ENST00000316848 LAS1LQ9Y4W2 734 aaKnown RBP23.39■■□□□ 1.33
MINDY2-201ENST00000316848 DCAF11Q8TEB1 546 aa23.38■■□□□ 1.33
MINDY2-201ENST00000316848 CECR2Q9BXF3 1484 aa23.38■■□□□ 1.33
MINDY2-201ENST00000316848 PNNQ9H307 717 aaKnown RBP23.37■■□□□ 1.33
MINDY2-201ENST00000316848 KANK1Q14678 1352 aa23.37■■□□□ 1.33
MINDY2-201ENST00000316848 CC2D1BQ5T0F9 858 aaKnown RBP23.34■■□□□ 1.33
MINDY2-201ENST00000316848 FRAT1Q92837 279 aaPredicted RBP23.34■■□□□ 1.33
MINDY2-201ENST00000316848 TNNT2P45379 298 aaPredicted RBP23.34■■□□□ 1.33
MINDY2-201ENST00000316848 LMOD2Q6P5Q4 547 aa23.33■■□□□ 1.33
MINDY2-201ENST00000316848 U2SURPO15042 1029 aaKnown RBP23.33■■□□□ 1.32
MINDY2-201ENST00000316848 SOGA1O94964 1423 aa23.32■■□□□ 1.32
MINDY2-201ENST00000316848 HDGFP51858 240 aaKnown RBP23.31■■□□□ 1.32
MINDY2-201ENST00000316848 ZRSR1Q15695 479 aaKnown RBP23.3■■□□□ 1.32
MINDY2-201ENST00000316848 RGS3P49796 1198 aa23.3■■□□□ 1.32
MINDY2-201ENST00000316848 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
MINDY2-201ENST00000316848 VPS8Q8N3P4 1428 aa23.27■■□□□ 1.32
MINDY2-201ENST00000316848 SETD5Q9C0A6 1442 aa23.26■■□□□ 1.31
MINDY2-201ENST00000316848 CCER2I3L3R5 266 aa23.25■■□□□ 1.31
MINDY2-201ENST00000316848 ARHGAP35Q9NRY4 1499 aa23.21■■□□□ 1.31
MINDY2-201ENST00000316848 SRPK2P78362 688 aaKnown RBP23.21■■□□□ 1.31
MINDY2-201ENST00000316848 PTMAP06454 111 aaKnown RBP23.2■■□□□ 1.3
MINDY2-201ENST00000316848 PKD2Q13563 968 aa23.19■■□□□ 1.3
MINDY2-201ENST00000316848 MORC1Q86VD1 984 aa23.19■■□□□ 1.3
MINDY2-201ENST00000316848 CARMIL2Q6F5E8 1435 aa23.19■■□□□ 1.3
MINDY2-201ENST00000316848 OS9Q13438 667 aaPredicted RBP23.17■■□□□ 1.3
MINDY2-201ENST00000316848 HSPA5P11021 654 aaKnown RBP23.16■■□□□ 1.3
MINDY2-201ENST00000316848 B4GALNT3Q6L9W6 998 aa23.15■■□□□ 1.3
MINDY2-201ENST00000316848 GGT6Q6P531 493 aa23.14■■□□□ 1.29
MINDY2-201ENST00000316848 MLECQ14165 292 aa23.13■■□□□ 1.29
MINDY2-201ENST00000316848 FMN1Q68DA7 1419 aa23.12■■□□□ 1.29
MINDY2-201ENST00000316848 KANK4Q5T7N3 995 aaPredicted RBP23.12■■□□□ 1.29
MINDY2-201ENST00000316848 ERICH6BQ5W0A0 696 aa23.12■■□□□ 1.29
MINDY2-201ENST00000316848 FGD1P98174 961 aa23.11■■□□□ 1.29
MINDY2-201ENST00000316848 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
MINDY2-201ENST00000316848 EFCAB2Q5VUJ9 269 aa23.1■■□□□ 1.29
MINDY2-201ENST00000316848 PDS5BQ9NTI5 1447 aa23.1■■□□□ 1.29
MINDY2-201ENST00000316848 HSP90AB1P08238 724 aaKnown RBP23.1■■□□□ 1.29
MINDY2-201ENST00000316848 KCNJ4P48050 445 aa23.1■■□□□ 1.29
MINDY2-201ENST00000316848 NOP58Q9Y2X3 529 aaKnown RBP23.1■■□□□ 1.29
MINDY2-201ENST00000316848 KTN1Q86UP2 1357 aaKnown RBP23.09■■□□□ 1.29
MINDY2-201ENST00000316848 SAFB2Q14151 953 aaKnown RBP eCLIP23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms