RNA–Protein interactions for RNA: ENST00000313050.11

SEC16A-203, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SEC16A, Length 8,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-203ENST00000313050 VSIG10Q8N0Z9 540 aa13.78□□□□□ -0.2
SEC16A-203ENST00000313050 PODXL2Q9NZ53 605 aa13.78□□□□□ -0.2
SEC16A-203ENST00000313050 GOLGA6L1Q8N7Z2 621 aa13.78□□□□□ -0.2
SEC16A-203ENST00000313050 LAS1LQ9Y4W2 734 aaKnown RBP13.77□□□□□ -0.2
SEC16A-203ENST00000313050 ARID3AQ99856 593 aa13.77□□□□□ -0.21
SEC16A-203ENST00000313050 PLCB2Q00722 1185 aa13.76□□□□□ -0.21
SEC16A-203ENST00000313050 USP35Q9P2H5 1018 aa13.74□□□□□ -0.21
SEC16A-203ENST00000313050 CASC1Q6TDU7 716 aa13.73□□□□□ -0.21
SEC16A-203ENST00000313050 FAM9BQ8IZU0 186 aa13.73□□□□□ -0.21
SEC16A-203ENST00000313050 A0A0U1RQG5 324 aaPredicted RBP13.72□□□□□ -0.21
SEC16A-203ENST00000313050 KIAA2012Q0VF49 1180 aa13.7□□□□□ -0.22
SEC16A-203ENST00000313050 DRC7Q8IY82 874 aa13.7□□□□□ -0.22
SEC16A-203ENST00000313050 NOC3LQ8WTT2 800 aaKnown RBP13.68□□□□□ -0.22
SEC16A-203ENST00000313050 PKNOX2Q96KN3 472 aa13.67□□□□□ -0.22
SEC16A-203ENST00000313050 IRX6P78412 446 aaPredicted RBP13.66□□□□□ -0.22
SEC16A-203ENST00000313050 TMC1Q8TDI8 760 aa13.65□□□□□ -0.22
SEC16A-203ENST00000313050 TPRNQ4KMQ1 711 aa13.64□□□□□ -0.23
SEC16A-203ENST00000313050 HSP90AB1P08238 724 aaKnown RBP13.62□□□□□ -0.23
SEC16A-203ENST00000313050 GOLGA6L3A6NEY3 463 aa13.62□□□□□ -0.23
SEC16A-203ENST00000313050 GOLGA6L4A6NEF3 574 aa13.62□□□□□ -0.23
SEC16A-203ENST00000313050 ZNF771Q7L3S4 317 aaPredicted RBP13.59□□□□□ -0.23
SEC16A-203ENST00000313050 SALL2Q9Y467 1007 aaPredicted RBP13.59□□□□□ -0.23
SEC16A-203ENST00000313050 WDR43Q15061 677 aaKnown RBP eCLIP13.58□□□□□ -0.24
SEC16A-203ENST00000313050 NOM1Q5C9Z4 860 aaKnown RBP13.56□□□□□ -0.24
SEC16A-203ENST00000313050 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
SEC16A-203ENST00000313050 DDX10Q13206 875 aaKnown RBP13.55□□□□□ -0.24
SEC16A-203ENST00000313050 TONSLQ96HA7 1378 aa13.55□□□□□ -0.24
SEC16A-203ENST00000313050 HSCBQ8IWL3 235 aa13.54□□□□□ -0.24
SEC16A-203ENST00000313050 STK11IPQ8N1F8 1099 aa13.53□□□□□ -0.24
SEC16A-203ENST00000313050 MRS2Q9HD23 443 aa13.51□□□□□ -0.25
SEC16A-203ENST00000313050 TULP1O00294 542 aaPredicted RBP13.5□□□□□ -0.25
SEC16A-203ENST00000313050 ZBTB7CA1YPR0 619 aa13.49□□□□□ -0.25
SEC16A-203ENST00000313050 HTATSF1O43719 755 aaKnown RBP13.49□□□□□ -0.25
SEC16A-203ENST00000313050 TEX35Q5T0J7 233 aa13.49□□□□□ -0.25
SEC16A-203ENST00000313050 PPP4R2Q9NY27 417 aa13.49□□□□□ -0.25
SEC16A-203ENST00000313050 SYAP1Q96A49 352 aaPredicted RBP13.48□□□□□ -0.25
SEC16A-203ENST00000313050 GBP4Q96PP9 640 aa13.48□□□□□ -0.25
SEC16A-203ENST00000313050 PRKCSHP14314 528 aaPredicted RBP13.48□□□□□ -0.25
SEC16A-203ENST00000313050 GPS2Q13227 327 aa13.47□□□□□ -0.25
SEC16A-203ENST00000313050 MIER1Q8N108 512 aa13.47□□□□□ -0.25
SEC16A-203ENST00000313050 RRP12Q5JTH9 1297 aaKnown RBP13.46□□□□□ -0.26
SEC16A-203ENST00000313050 RBM19Q9Y4C8 960 aaKnown RBP13.46□□□□□ -0.26
SEC16A-203ENST00000313050 CCDC180Q9P1Z9 1646 aa13.44□□□□□ -0.26
SEC16A-203ENST00000313050 TIMELESSQ9UNS1 1208 aa13.43□□□□□ -0.26
SEC16A-203ENST00000313050 SUPT16HQ9Y5B9 1047 aaKnown RBP13.43□□□□□ -0.26
SEC16A-203ENST00000313050 FTSJ3Q8IY81 847 aaKnown RBP13.43□□□□□ -0.26
SEC16A-203ENST00000313050 GZF1Q9H116 711 aaPredicted RBP13.41□□□□□ -0.26
SEC16A-203ENST00000313050 TPM4P67936 248 aa13.4□□□□□ -0.26
SEC16A-203ENST00000313050 PATL2C9JE40 543 aaKnown RBP13.39□□□□□ -0.27
SEC16A-203ENST00000313050 MEX3CQ5U5Q3 659 aaKnown RBP13.39□□□□□ -0.27
SEC16A-203ENST00000313050 PHF14O94880 888 aa13.39□□□□□ -0.27
SEC16A-203ENST00000313050 MTERF4Q7Z6M4 381 aaKnown RBP13.39□□□□□ -0.27
SEC16A-203ENST00000313050 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
SEC16A-203ENST00000313050 FGD1P98174 961 aa13.38□□□□□ -0.27
SEC16A-203ENST00000313050 TAF7LQ5H9L4 462 aa13.38□□□□□ -0.27
SEC16A-203ENST00000313050 CWC15Q9P013 229 aaKnown RBP13.38□□□□□ -0.27
SEC16A-203ENST00000313050 CCDC66A2RUB6 948 aa13.37□□□□□ -0.27
SEC16A-203ENST00000313050 RDXP35241 583 aaKnown RBP13.37□□□□□ -0.27
SEC16A-203ENST00000313050 CFAP44Q96MT7 982 aa13.36□□□□□ -0.27
SEC16A-203ENST00000313050 NEFHP12036 1026 aa13.36□□□□□ -0.27
SEC16A-203ENST00000313050 RGS3P49796 1198 aa13.36□□□□□ -0.27
SEC16A-203ENST00000313050 MAP7D2Q96T17 732 aa13.36□□□□□ -0.27
SEC16A-203ENST00000313050 MCCP23508 829 aa13.35□□□□□ -0.27
SEC16A-203ENST00000313050 NCBP3Q53F19 620 aaKnown RBP13.34□□□□□ -0.27
SEC16A-203ENST00000313050 CALD1Q05682 793 aaKnown RBP13.34□□□□□ -0.27
SEC16A-203ENST00000313050 CHMP4BQ9H444 224 aaKnown RBP13.33□□□□□ -0.28
SEC16A-203ENST00000313050 CCDC70Q6NSX1 233 aa13.32□□□□□ -0.28
SEC16A-203ENST00000313050 HMMRO75330 724 aa13.32□□□□□ -0.28
SEC16A-203ENST00000313050 SPRYD3Q8NCJ5 442 aa13.31□□□□□ -0.28
SEC16A-203ENST00000313050 FAM13BQ9NYF5 915 aa13.31□□□□□ -0.28
SEC16A-203ENST00000313050 CCDC191Q8NCU4 936 aa13.31□□□□□ -0.28
SEC16A-203ENST00000313050 KCNJ4P48050 445 aa13.3□□□□□ -0.28
SEC16A-203ENST00000313050 CLSTN1O94985 981 aa13.3□□□□□ -0.28
SEC16A-203ENST00000313050 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.29□□□□□ -0.28
SEC16A-203ENST00000313050 TAF3Q5VWG9 929 aa13.28□□□□□ -0.28
SEC16A-203ENST00000313050 TPM3P06753 285 aa13.28□□□□□ -0.28
SEC16A-203ENST00000313050 CSPP1Q1MSJ5 1256 aa13.28□□□□□ -0.28
SEC16A-203ENST00000313050 NAP1L2Q9ULW6 460 aaPredicted RBP13.28□□□□□ -0.28
SEC16A-203ENST00000313050 PRM3Q9NNZ6 103 aa13.27□□□□□ -0.28
SEC16A-203ENST00000313050 GNL2Q13823 731 aaKnown RBP13.27□□□□□ -0.29
SEC16A-203ENST00000313050 IPO9Q96P70 1041 aaKnown RBP13.27□□□□□ -0.29
SEC16A-203ENST00000313050 B4GALNT3Q6L9W6 998 aa13.27□□□□□ -0.29
SEC16A-203ENST00000313050 HSP90B1P14625 803 aaKnown RBP13.26□□□□□ -0.29
SEC16A-203ENST00000313050 TAOK2Q9UL54 1235 aa13.25□□□□□ -0.29
SEC16A-203ENST00000313050 GSE1Q14687 1217 aa13.25□□□□□ -0.29
SEC16A-203ENST00000313050 MS4A1P11836 297 aa13.24□□□□□ -0.29
SEC16A-203ENST00000313050 DDX11L8A8MPP1 907 aa13.24□□□□□ -0.29
SEC16A-203ENST00000313050 H0YHG0 523 aa13.24□□□□□ -0.29
SEC16A-203ENST00000313050 CCDC34Q96HJ3 373 aa13.24□□□□□ -0.29
SEC16A-203ENST00000313050 DYDC1Q8WWB3 177 aa13.23□□□□□ -0.29
SEC16A-203ENST00000313050 PDE4CQ08493 712 aa13.22□□□□□ -0.29
SEC16A-203ENST00000313050 AK7Q96M32 723 aa13.21□□□□□ -0.29
SEC16A-203ENST00000313050 CCAR2Q8N163 923 aaKnown RBP13.21□□□□□ -0.29
SEC16A-203ENST00000313050 SLKQ9H2G2 1235 aaPredicted RBP13.21□□□□□ -0.3
SEC16A-203ENST00000313050 DCTN1Q14203 1278 aa13.2□□□□□ -0.3
SEC16A-203ENST00000313050 HSP90AB3PQ58FF7 597 aa13.2□□□□□ -0.3
SEC16A-203ENST00000313050 ACBD3Q9H3P7 528 aa13.19□□□□□ -0.3
SEC16A-203ENST00000313050 ARGLU1Q9NWB6 273 aaPredicted RBP13.18□□□□□ -0.3
SEC16A-203ENST00000313050 CEP89Q96ST8 783 aa13.18□□□□□ -0.3
SEC16A-203ENST00000313050 FAM43AQ8N2R8 423 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms