RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 JPH4Q96JJ6 628 aa14.21□□□□□ -0.13
TPM3-203ENST00000312970 SENP3Q9H4L4 574 aaPredicted RBP14.21□□□□□ -0.13
TPM3-203ENST00000312970 PLPPR3Q6T4P5 718 aa14.18□□□□□ -0.14
TPM3-203ENST00000312970 RUSC2Q8N2Y8 1516 aa14.18□□□□□ -0.14
TPM3-203ENST00000312970 PRG4Q92954 1404 aaPredicted RBP14.17□□□□□ -0.14
TPM3-203ENST00000312970 IGF1RP08069 1367 aa14.16□□□□□ -0.14
TPM3-203ENST00000312970 ILDR1Q86SU0 546 aaPredicted RBP14.15□□□□□ -0.14
TPM3-203ENST00000312970 KIF27Q86VH2 1401 aa14.15□□□□□ -0.14
TPM3-203ENST00000312970 KDM4FA0A1W2PPD8 638 aa14.14□□□□□ -0.15
TPM3-203ENST00000312970 FAM69CQ0P6D2 419 aa14.12□□□□□ -0.15
TPM3-203ENST00000312970 CUL7Q14999 1698 aa14.08□□□□□ -0.16
TPM3-203ENST00000312970 KIAA0586Q9BVV6 1533 aa14.08□□□□□ -0.16
TPM3-203ENST00000312970 MAPKBP1O60336 1514 aa14.07□□□□□ -0.16
TPM3-203ENST00000312970 NPM1P06748 294 aaKnown RBP eCLIP14.07□□□□□ -0.16
TPM3-203ENST00000312970 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
TPM3-203ENST00000312970 ADCY10Q96PN6 1610 aa14.07□□□□□ -0.16
TPM3-203ENST00000312970 CARMIL1Q5VZK9 1371 aa14.07□□□□□ -0.16
TPM3-203ENST00000312970 ABCC10Q5T3U5 1492 aa14.06□□□□□ -0.16
TPM3-203ENST00000312970 DIP2BQ9P265 1576 aa14.05□□□□□ -0.16
TPM3-203ENST00000312970 TSPOAP1O95153 1857 aa13.99□□□□□ -0.17
TPM3-203ENST00000312970 KDM6BO15054 1643 aa13.97□□□□□ -0.17
TPM3-203ENST00000312970 PTPRGP23470 1445 aa13.97□□□□□ -0.17
TPM3-203ENST00000312970 CARMIL2Q6F5E8 1435 aa13.96□□□□□ -0.18
TPM3-203ENST00000312970 TTBK1Q5TCY1 1321 aaPredicted RBP13.95□□□□□ -0.18
TPM3-203ENST00000312970 TNIKQ9UKE5 1360 aa13.94□□□□□ -0.18
TPM3-203ENST00000312970 IQGAP2Q13576 1575 aa13.92□□□□□ -0.18
TPM3-203ENST00000312970 RAPGEF2Q9Y4G8 1499 aa13.92□□□□□ -0.18
TPM3-203ENST00000312970 ABCC2Q92887 1545 aa13.9□□□□□ -0.19
TPM3-203ENST00000312970 PPRC1Q5VV67 1664 aaKnown RBP13.86□□□□□ -0.19
TPM3-203ENST00000312970 UHRF1BP1LA0JNW5 1464 aa13.86□□□□□ -0.19
TPM3-203ENST00000312970 DISP1Q96F81 1524 aa13.85□□□□□ -0.19
TPM3-203ENST00000312970 GLI2P10070 1586 aa13.85□□□□□ -0.19
TPM3-203ENST00000312970 ASXL2Q76L83 1435 aa13.85□□□□□ -0.19
TPM3-203ENST00000312970 PLB1Q6P1J6 1458 aa13.85□□□□□ -0.19
TPM3-203ENST00000312970 UACAQ9BZF9 1416 aa13.84□□□□□ -0.19
TPM3-203ENST00000312970 ADGRL1O94910 1474 aa13.84□□□□□ -0.19
TPM3-203ENST00000312970 UGGT2Q9NYU1 1516 aa13.84□□□□□ -0.19
TPM3-203ENST00000312970 KIAA0556O60303 1618 aa13.8□□□□□ -0.2
TPM3-203ENST00000312970 ZCCHC11Q5TAX3 1644 aaKnown RBP13.8□□□□□ -0.2
TPM3-203ENST00000312970 MAP3K4Q9Y6R4 1608 aa13.8□□□□□ -0.2
TPM3-203ENST00000312970 COL17A1Q9UMD9 1497 aaPredicted RBP13.8□□□□□ -0.2
TPM3-203ENST00000312970 KDM5BQ9UGL1 1544 aa13.8□□□□□ -0.2
TPM3-203ENST00000312970 CTTNBP2Q8WZ74 1663 aa13.79□□□□□ -0.2
TPM3-203ENST00000312970 HECW2Q9P2P5 1572 aa13.79□□□□□ -0.2
TPM3-203ENST00000312970 EPRSP07814 1512 aaKnown RBP13.77□□□□□ -0.21
TPM3-203ENST00000312970 PRXQ9BXM0 1461 aa13.77□□□□□ -0.21
TPM3-203ENST00000312970 GOLGA3Q08378 1498 aa13.75□□□□□ -0.21
TPM3-203ENST00000312970 FAM9AQ8IZU1 332 aaPredicted RBP13.74□□□□□ -0.21
TPM3-203ENST00000312970 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
TPM3-203ENST00000312970 TEX14Q8IWB6 1497 aa13.74□□□□□ -0.21
TPM3-203ENST00000312970 WDR7Q9Y4E6 1490 aa13.7□□□□□ -0.22
TPM3-203ENST00000312970 P3H3Q8IVL6 736 aa13.68□□□□□ -0.22
TPM3-203ENST00000312970 KCNH8Q96L42 1107 aa13.68□□□□□ -0.22
TPM3-203ENST00000312970 CFAP43Q8NDM7 1665 aa13.68□□□□□ -0.22
TPM3-203ENST00000312970 ABCA8O94911 1581 aa13.67□□□□□ -0.22
TPM3-203ENST00000312970 FBXO41Q8TF61 875 aa13.65□□□□□ -0.22
TPM3-203ENST00000312970 EEA1Q15075 1411 aa13.64□□□□□ -0.23
TPM3-203ENST00000312970 MAGI3Q5TCQ9 1506 aa13.63□□□□□ -0.23
TPM3-203ENST00000312970 CD109Q6YHK3 1445 aa13.62□□□□□ -0.23
TPM3-203ENST00000312970 ARID3CA6NKF2 412 aa13.6□□□□□ -0.23
TPM3-203ENST00000312970 RANGAP1P46060 587 aaPredicted RBP13.59□□□□□ -0.23
TPM3-203ENST00000312970 ATP10BO94823 1461 aa13.59□□□□□ -0.23
TPM3-203ENST00000312970 KIF21BO75037 1637 aa13.57□□□□□ -0.24
TPM3-203ENST00000312970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
TPM3-203ENST00000312970 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
TPM3-203ENST00000312970 SAMD9Q5K651 1589 aa13.56□□□□□ -0.24
TPM3-203ENST00000312970 KCNA4P22459 653 aa13.55□□□□□ -0.24
TPM3-203ENST00000312970 ABCA9Q8IUA7 1624 aa13.53□□□□□ -0.24
TPM3-203ENST00000312970 ARAP3Q8WWN8 1544 aa13.53□□□□□ -0.24
TPM3-203ENST00000312970 RAPGEF6Q8TEU7 1601 aa13.52□□□□□ -0.25
TPM3-203ENST00000312970 PHLDB1Q86UU1 1377 aa13.5□□□□□ -0.25
TPM3-203ENST00000312970 PLEKHD1A6NEE1 506 aa13.5□□□□□ -0.25
TPM3-203ENST00000312970 FHOD3Q2V2M9 1422 aa13.49□□□□□ -0.25
TPM3-203ENST00000312970 UBTFP17480 764 aaKnown RBP13.48□□□□□ -0.25
TPM3-203ENST00000312970 NUP153P49790 1475 aaKnown RBP13.48□□□□□ -0.25
TPM3-203ENST00000312970 PTPRMP28827 1452 aa13.46□□□□□ -0.25
TPM3-203ENST00000312970 ADAMTSL3P82987 1691 aa13.45□□□□□ -0.26
TPM3-203ENST00000312970 NEO1Q92859 1461 aa13.45□□□□□ -0.26
TPM3-203ENST00000312970 EFCAB5A4FU69 1503 aa13.44□□□□□ -0.26
TPM3-203ENST00000312970 RAPGEF3O95398 923 aa13.44□□□□□ -0.26
TPM3-203ENST00000312970 FRMPD1Q5SYB0 1578 aa13.44□□□□□ -0.26
TPM3-203ENST00000312970 BCORL1Q5H9F3 1711 aa13.42□□□□□ -0.26
TPM3-203ENST00000312970 SLC24A1O60721 1099 aa13.41□□□□□ -0.26
TPM3-203ENST00000312970 ATP1B4Q9UN42 357 aaPredicted RBP13.4□□□□□ -0.26
TPM3-203ENST00000312970 LMTK3Q96Q04 1460 aa13.4□□□□□ -0.26
TPM3-203ENST00000312970 RICTORQ6R327 1708 aa13.39□□□□□ -0.27
TPM3-203ENST00000312970 CFAP74Q9C0B2 1584 aa13.39□□□□□ -0.27
TPM3-203ENST00000312970 MADDQ8WXG6 1647 aa13.39□□□□□ -0.27
TPM3-203ENST00000312970 ARHGEF40Q8TER5 1519 aa13.38□□□□□ -0.27
TPM3-203ENST00000312970 PCF11O94913 1555 aaKnown RBP13.37□□□□□ -0.27
TPM3-203ENST00000312970 FMN1Q68DA7 1419 aa13.37□□□□□ -0.27
TPM3-203ENST00000312970 HSPA2P54652 639 aa13.36□□□□□ -0.27
TPM3-203ENST00000312970 ILDR2Q71H61 639 aa13.36□□□□□ -0.27
TPM3-203ENST00000312970 CDK11AQ9UQ88 783 aaPredicted RBP13.36□□□□□ -0.27
TPM3-203ENST00000312970 AKNAQ7Z591 1439 aa13.36□□□□□ -0.27
TPM3-203ENST00000312970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.35□□□□□ -0.273e-7■□□□□ 8.5
TPM3-203ENST00000312970 TTC37Q6PGP7 1564 aa13.35□□□□□ -0.27
TPM3-203ENST00000312970 ARID4BQ4LE39 1312 aaPredicted RBP13.35□□□□□ -0.27
TPM3-203ENST00000312970 FANCAO15360 1455 aa13.35□□□□□ -0.27
TPM3-203ENST00000312970 DENND4BO75064 1496 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 206.2 ms