RNA–Protein interactions for RNA: ENST00000310522.5

TRPV1-201, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPV1, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-201ENST00000310522 GRIN2BQ13224 1484 aa20.87■□□□□ 0.93
TRPV1-201ENST00000310522 EIF4G3O43432 1585 aaKnown RBP20.87■□□□□ 0.93
TRPV1-201ENST00000310522 FHAD1B1AJZ9 1412 aa20.83■□□□□ 0.92
TRPV1-201ENST00000310522 P3H3Q8IVL6 736 aa20.82■□□□□ 0.92
TRPV1-201ENST00000310522 HRCP23327 699 aa20.8■□□□□ 0.92
TRPV1-201ENST00000310522 SNAPC4Q5SXM2 1469 aa20.79■□□□□ 0.92
TRPV1-201ENST00000310522 FHOD3Q2V2M9 1422 aa20.78■□□□□ 0.92
TRPV1-201ENST00000310522 APLP2Q06481 763 aa20.78■□□□□ 0.92
TRPV1-201ENST00000310522 EFCAB5A4FU69 1503 aa20.74■□□□□ 0.91
TRPV1-201ENST00000310522 KANK4Q5T7N3 995 aaPredicted RBP20.73■□□□□ 0.91
TRPV1-201ENST00000310522 PCF11O94913 1555 aaKnown RBP20.7■□□□□ 0.9
TRPV1-201ENST00000310522 SAMD9Q5K651 1589 aa20.7■□□□□ 0.9
TRPV1-201ENST00000310522 GRIN2AQ12879 1464 aa20.65■□□□□ 0.9
TRPV1-201ENST00000310522 IQGAP2Q13576 1575 aa20.65■□□□□ 0.9
TRPV1-201ENST00000310522 MAGI1Q96QZ7 1491 aaPredicted RBP20.65■□□□□ 0.9
TRPV1-201ENST00000310522 TIAM1Q13009 1591 aa20.63■□□□□ 0.89
TRPV1-201ENST00000310522 SYNJ2O15056 1496 aa20.6■□□□□ 0.89
TRPV1-201ENST00000310522 ATP1B4Q9UN42 357 aaPredicted RBP20.59■□□□□ 0.89
TRPV1-201ENST00000310522 CASKIN1Q8WXD9 1431 aa20.57■□□□□ 0.88
TRPV1-201ENST00000310522 FYCO1Q9BQS8 1478 aa20.57■□□□□ 0.88
TRPV1-201ENST00000310522 CEP170Q5SW79 1584 aa20.57■□□□□ 0.88
TRPV1-201ENST00000310522 CFAP43Q8NDM7 1665 aa20.57■□□□□ 0.88
TRPV1-201ENST00000310522 FBLN2P98095 1184 aa20.56■□□□□ 0.88
TRPV1-201ENST00000310522 CHMP7Q8WUX9 453 aaPredicted RBP20.56■□□□□ 0.88
TRPV1-201ENST00000310522 MAP3K1Q13233 1512 aa20.56■□□□□ 0.88
TRPV1-201ENST00000310522 FMN1Q68DA7 1419 aa20.55■□□□□ 0.88
TRPV1-201ENST00000310522 KIAA0586Q9BVV6 1533 aa20.55■□□□□ 0.88
TRPV1-201ENST00000310522 UGGT2Q9NYU1 1516 aa20.54■□□□□ 0.88
TRPV1-201ENST00000310522 LRRIQ1Q96JM4 1722 aa20.52■□□□□ 0.88
TRPV1-201ENST00000310522 LRRC9Q6ZRR7 1453 aa20.52■□□□□ 0.88
TRPV1-201ENST00000310522 HNRNPUL2Q1KMD3 747 aaKnown RBP20.5■□□□□ 0.87
TRPV1-201ENST00000310522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.49■□□□□ 0.87
TRPV1-201ENST00000310522 DISP1Q96F81 1524 aa20.49■□□□□ 0.87
TRPV1-201ENST00000310522 NUP160Q12769 1436 aa20.48■□□□□ 0.87
TRPV1-201ENST00000310522 KIAA0556O60303 1618 aa20.46■□□□□ 0.87
TRPV1-201ENST00000310522 RRBP1Q9P2E9 1410 aaKnown RBP20.44■□□□□ 0.86
TRPV1-201ENST00000310522 PHLDB1Q86UU1 1377 aa20.41■□□□□ 0.86
TRPV1-201ENST00000310522 CHD1O14646 1710 aa20.4■□□□□ 0.86
TRPV1-201ENST00000310522 CCNB3Q8WWL7 1395 aa20.37■□□□□ 0.85
TRPV1-201ENST00000310522 HECW1Q76N89 1606 aa20.36■□□□□ 0.85
TRPV1-201ENST00000310522 CCER1Q8TC90 406 aaPredicted RBP20.35■□□□□ 0.85
TRPV1-201ENST00000310522 JPH4Q96JJ6 628 aa20.35■□□□□ 0.85
TRPV1-201ENST00000310522 MAGI3Q5TCQ9 1506 aa20.34■□□□□ 0.85
TRPV1-201ENST00000310522 ARID3CA6NKF2 412 aa20.34■□□□□ 0.85
TRPV1-201ENST00000310522 CDK13Q14004 1512 aaKnown RBP20.33■□□□□ 0.84
TRPV1-201ENST00000310522 EPRSP07814 1512 aaKnown RBP20.32■□□□□ 0.84
TRPV1-201ENST00000310522 MTUS2Q5JR59 1369 aa20.31■□□□□ 0.84
TRPV1-201ENST00000310522 ZEB1P37275 1124 aaPredicted RBP20.3■□□□□ 0.84
TRPV1-201ENST00000310522 CCDC18Q5T9S5 1454 aa20.29■□□□□ 0.84
TRPV1-201ENST00000310522 RAPGEF6Q8TEU7 1601 aa20.28■□□□□ 0.84
TRPV1-201ENST00000310522 ITGAEP38570 1179 aa20.27■□□□□ 0.84
TRPV1-201ENST00000310522 EHBP1L1Q8N3D4 1523 aa20.27■□□□□ 0.83
TRPV1-201ENST00000310522 NUP153P49790 1475 aaKnown RBP20.26■□□□□ 0.83
TRPV1-201ENST00000310522 CARMIL2Q6F5E8 1435 aa20.25■□□□□ 0.83
TRPV1-201ENST00000310522 NCOA2Q15596 1464 aa20.25■□□□□ 0.83
TRPV1-201ENST00000310522 PLB1Q6P1J6 1458 aa20.25■□□□□ 0.83
TRPV1-201ENST00000310522 SUPT6HQ7KZ85 1726 aaKnown RBP20.23■□□□□ 0.83
TRPV1-201ENST00000310522 PRG4Q92954 1404 aaPredicted RBP20.22■□□□□ 0.83
TRPV1-201ENST00000310522 FAM50AQ14320 339 aaKnown RBP20.22■□□□□ 0.83
TRPV1-201ENST00000310522 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
TRPV1-201ENST00000310522 FGD6Q6ZV73 1430 aa20.19■□□□□ 0.82
TRPV1-201ENST00000310522 SHROOM2Q13796 1616 aa20.17■□□□□ 0.82
TRPV1-201ENST00000310522 ERCC6L2Q5T890 1561 aa20.16■□□□□ 0.82
TRPV1-201ENST00000310522 MYOM3Q5VTT5 1437 aa20.15■□□□□ 0.82
TRPV1-201ENST00000310522 ABCA8O94911 1581 aa20.15■□□□□ 0.82
TRPV1-201ENST00000310522 CLASP1Q7Z460 1538 aa20.12■□□□□ 0.81
TRPV1-201ENST00000310522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.09■□□□□ 0.81
TRPV1-201ENST00000310522 PTPRGP23470 1445 aa20.09■□□□□ 0.81
TRPV1-201ENST00000310522 PELP1Q8IZL8 1130 aaKnown RBP20.08■□□□□ 0.81
TRPV1-201ENST00000310522 PTPN23Q9H3S7 1636 aa20.08■□□□□ 0.81
TRPV1-201ENST00000310522 PTPRKQ15262 1439 aa20.06■□□□□ 0.8
TRPV1-201ENST00000310522 DHX57Q6P158 1386 aaKnown RBP20.06■□□□□ 0.8
TRPV1-201ENST00000310522 RAB3GAP2Q9H2M9 1393 aa20.06■□□□□ 0.8
TRPV1-201ENST00000310522 ATP10BO94823 1461 aa20.04■□□□□ 0.8
TRPV1-201ENST00000310522 TROQ12816 1431 aaPredicted RBP20.03■□□□□ 0.8
TRPV1-201ENST00000310522 KIF14Q15058 1648 aa20.03■□□□□ 0.8
TRPV1-201ENST00000310522 SETD5Q9C0A6 1442 aa20.02■□□□□ 0.8
TRPV1-201ENST00000310522 TCOF1Q13428 1488 aaKnown RBP20.01■□□□□ 0.79
TRPV1-201ENST00000310522 CDK11AQ9UQ88 783 aaPredicted RBP20.01■□□□□ 0.79
TRPV1-201ENST00000310522 ADCY10Q96PN6 1610 aa19.98■□□□□ 0.79
TRPV1-201ENST00000310522 UACAQ9BZF9 1416 aa19.97■□□□□ 0.79
TRPV1-201ENST00000310522 MIA2Q96PC5 1412 aa19.97■□□□□ 0.79
TRPV1-201ENST00000310522 ZNF644Q9H582 1327 aaPredicted RBP19.94■□□□□ 0.78
TRPV1-201ENST00000310522 PLEKHD1A6NEE1 506 aa19.91■□□□□ 0.78
TRPV1-201ENST00000310522 ABCC2Q92887 1545 aa19.91■□□□□ 0.78
TRPV1-201ENST00000310522 GPATCH8Q9UKJ3 1502 aaKnown RBP19.91■□□□□ 0.78
TRPV1-201ENST00000310522 CHIC2Q9UKJ5 165 aa19.9■□□□□ 0.78
TRPV1-201ENST00000310522 HFM1A2PYH4 1435 aa19.89■□□□□ 0.77
TRPV1-201ENST00000310522 ABCC10Q5T3U5 1492 aa19.89■□□□□ 0.77
TRPV1-201ENST00000310522 MAPKBP1O60336 1514 aa19.88■□□□□ 0.77
TRPV1-201ENST00000310522 NAIPQ13075 1403 aa19.88■□□□□ 0.77
TRPV1-201ENST00000310522 ITSN2Q9NZM3 1697 aa19.87■□□□□ 0.77
TRPV1-201ENST00000310522 CDC42BPAQ5VT25 1732 aa19.86■□□□□ 0.77
TRPV1-201ENST00000310522 CAMSAP2Q08AD1 1489 aa19.85■□□□□ 0.77
TRPV1-201ENST00000310522 CLSPNQ9HAW4 1339 aa19.85■□□□□ 0.77
TRPV1-201ENST00000310522 RRP7BPQ9NSQ0 103 aa19.85■□□□□ 0.77
TRPV1-201ENST00000310522 CFDP1Q9UEE9 299 aaPredicted RBP19.84■□□□□ 0.77
TRPV1-201ENST00000310522 DAPK1P53355 1430 aa19.84■□□□□ 0.77
TRPV1-201ENST00000310522 DNMT1P26358 1616 aaKnown RBP19.84■□□□□ 0.77
TRPV1-201ENST00000310522 ABCC5O15440 1437 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms