RNA–Protein interactions for RNA: ENST00000310015.10

SP3-201, Transcript of Sp3 transcription factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SP3, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-201ENST00000310015 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.42■□□□□ 0.06
SP3-201ENST00000310015 CHGAP10645 457 aaKnown RBP15.41■□□□□ 0.06
SP3-201ENST00000310015 FBLN2P98095 1184 aa15.4■□□□□ 0.06
SP3-201ENST00000310015 TONSLQ96HA7 1378 aa15.39■□□□□ 0.05
SP3-201ENST00000310015 DDRGK1Q96HY6 314 aa15.37■□□□□ 0.05
SP3-201ENST00000310015 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
SP3-201ENST00000310015 BECN1Q14457 450 aa15.36■□□□□ 0.05
SP3-201ENST00000310015 HIRIP3Q9BW71 556 aaPredicted RBP15.36■□□□□ 0.05
SP3-201ENST00000310015 MYH16Q9H6N6 1097 aa15.33■□□□□ 0.04
SP3-201ENST00000310015 WDR43Q15061 677 aaKnown RBP eCLIP15.33■□□□□ 0.04
SP3-201ENST00000310015 ZRSR1Q15695 479 aaKnown RBP15.32■□□□□ 0.04
SP3-201ENST00000310015 TMC1Q8TDI8 760 aa15.32■□□□□ 0.04
SP3-201ENST00000310015 GOLGA6L22H0YM25 854 aa15.32■□□□□ 0.04
SP3-201ENST00000310015 SPRYD3Q8NCJ5 442 aa15.27■□□□□ 0.03
SP3-201ENST00000310015 MRS2Q9HD23 443 aa15.27■□□□□ 0.03
SP3-201ENST00000310015 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
SP3-201ENST00000310015 ERICH6BQ5W0A0 696 aa15.26■□□□□ 0.03
SP3-201ENST00000310015 CCDC180Q9P1Z9 1646 aa15.25■□□□□ 0.03
SP3-201ENST00000310015 SUPT16HQ9Y5B9 1047 aaKnown RBP15.24■□□□□ 0.03
SP3-201ENST00000310015 MYO15BQ96JP2 1530 aa15.23■□□□□ 0.03
SP3-201ENST00000310015 DEKP35659 375 aaKnown RBP15.21■□□□□ 0.03
SP3-201ENST00000310015 KDM2AQ9Y2K7 1162 aa15.2■□□□□ 0.02
SP3-201ENST00000310015 PPM1GO15355 546 aaPredicted RBP15.2■□□□□ 0.02
SP3-201ENST00000310015 NOP58Q9Y2X3 529 aaKnown RBP15.19■□□□□ 0.02
SP3-201ENST00000310015 CLSTN1O94985 981 aa15.19■□□□□ 0.02
SP3-201ENST00000310015 CHIC2Q9UKJ5 165 aa15.19■□□□□ 0.02
SP3-201ENST00000310015 PRKCSHP14314 528 aaPredicted RBP15.18■□□□□ 0.02
SP3-201ENST00000310015 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.027e-13■■□□□ 12.4
SP3-201ENST00000310015 NAP1L2Q9ULW6 460 aaPredicted RBP15.16■□□□□ 0.02
SP3-201ENST00000310015 DRC7Q8IY82 874 aa15.15■□□□□ 0.02
SP3-201ENST00000310015 HSP90AB1P08238 724 aaKnown RBP15.15■□□□□ 0.02
SP3-201ENST00000310015 GOLGA6L6A8MZA4 724 aa15.14■□□□□ 0.01
SP3-201ENST00000310015 RGS3P49796 1198 aa15.14■□□□□ 0.01
SP3-201ENST00000310015 MSNP26038 577 aaKnown RBP15.14■□□□□ 0.01
SP3-201ENST00000310015 C14orf37Q86TY3 774 aa15.13■□□□□ 0.01
SP3-201ENST00000310015 CASC1Q6TDU7 716 aa15.12■□□□□ 0.01
SP3-201ENST00000310015 TNNT3P45378 269 aaPredicted RBP15.11■□□□□ 0.01
SP3-201ENST00000310015 PPP4R2Q9NY27 417 aa15.11■□□□□ 0.01
SP3-201ENST00000310015 PDE4CQ08493 712 aa15.1■□□□□ 0.01
SP3-201ENST00000310015 ESF1Q9H501 851 aaKnown RBP15.1■□□□□ 0.01
SP3-201ENST00000310015 CHAF1AQ13111 956 aaPredicted RBP15.1■□□□□ 0.01
SP3-201ENST00000310015 PODXL2Q9NZ53 605 aa15.09■□□□□ 0.01
SP3-201ENST00000310015 RBM19Q9Y4C8 960 aaKnown RBP15.06■□□□□ 0
SP3-201ENST00000310015 ANO8Q9HCE9 1232 aaPredicted RBP15.05■□□□□ 0
SP3-201ENST00000310015 EIF4G2P78344 907 aaKnown RBP eCLIP15.05■□□□□ -0
SP3-201ENST00000310015 FTSJ3Q8IY81 847 aaKnown RBP15.04■□□□□ -0
SP3-201ENST00000310015 ABCC9O60706 1549 aa15.03■□□□□ -0
SP3-201ENST00000310015 A0A0U1RQG5 324 aaPredicted RBP15.03■□□□□ -0
SP3-201ENST00000310015 GZF1Q9H116 711 aaPredicted RBP15.03■□□□□ -0
SP3-201ENST00000310015 NEUROD2Q15784 382 aa15.02□□□□□ -0.01
SP3-201ENST00000310015 NOC3LQ8WTT2 800 aaKnown RBP15.01□□□□□ -0.01
SP3-201ENST00000310015 PRM3Q9NNZ6 103 aa14.99□□□□□ -0.01
SP3-201ENST00000310015 FRAT1Q92837 279 aaPredicted RBP14.99□□□□□ -0.01
SP3-201ENST00000310015 B4GALNT3Q6L9W6 998 aa14.98□□□□□ -0.01
SP3-201ENST00000310015 FGD1P98174 961 aa14.98□□□□□ -0.01
SP3-201ENST00000310015 CLIP1P30622 1438 aa14.97□□□□□ -0.01
SP3-201ENST00000310015 PATL2C9JE40 543 aaKnown RBP14.95□□□□□ -0.02
SP3-201ENST00000310015 FBXO3Q9UK99 471 aa14.95□□□□□ -0.02
SP3-201ENST00000310015 L1TD1Q5T7N2 865 aaKnown RBP14.94□□□□□ -0.02
SP3-201ENST00000310015 GOLGA6L4A6NEF3 574 aa14.94□□□□□ -0.02
SP3-201ENST00000310015 TSHZ2Q9NRE2 1034 aa14.94□□□□□ -0.02
SP3-201ENST00000310015 OS9Q13438 667 aaPredicted RBP14.94□□□□□ -0.02
SP3-201ENST00000310015 KCNJ4P48050 445 aa14.93□□□□□ -0.02
SP3-201ENST00000310015 HSCBQ8IWL3 235 aa14.93□□□□□ -0.02
SP3-201ENST00000310015 PNNQ9H307 717 aaKnown RBP14.93□□□□□ -0.02
SP3-201ENST00000310015 CEP162Q5TB80 1403 aa14.93□□□□□ -0.02
SP3-201ENST00000310015 NRDCO43847 1150 aa14.91□□□□□ -0.02
SP3-201ENST00000310015 RRP7BPQ9NSQ0 103 aa14.9□□□□□ -0.02
SP3-201ENST00000310015 ZCCHC6Q5VYS8 1495 aaKnown RBP14.89□□□□□ -0.03
SP3-201ENST00000310015 ISY1Q9ULR0 285 aaKnown RBP14.89□□□□□ -0.03
SP3-201ENST00000310015 NPHP1O15259 732 aa14.87□□□□□ -0.03
SP3-201ENST00000310015 HAP1P54257 671 aaPredicted RBP14.86□□□□□ -0.03
SP3-201ENST00000310015 VSIG10Q8N0Z9 540 aa14.85□□□□□ -0.03
SP3-201ENST00000310015 KIAA2012Q0VF49 1180 aa14.84□□□□□ -0.03
SP3-201ENST00000310015 CCER2I3L3R5 266 aa14.84□□□□□ -0.03
SP3-201ENST00000310015 GOLGA3Q08378 1498 aa14.83□□□□□ -0.04
SP3-201ENST00000310015 APBB1O00213 710 aa14.83□□□□□ -0.04
SP3-201ENST00000310015 GNL2Q13823 731 aaKnown RBP14.83□□□□□ -0.04
SP3-201ENST00000310015 FOXD4L1Q9NU39 408 aa14.83□□□□□ -0.04
SP3-201ENST00000310015 CALRP27797 417 aaKnown RBP14.83□□□□□ -0.04
SP3-201ENST00000310015 RGL3Q3MIN7 710 aa14.83□□□□□ -0.04
SP3-201ENST00000310015 MTUS2Q5JR59 1369 aa14.83□□□□□ -0.04
SP3-201ENST00000310015 CC2D1BQ5T0F9 858 aaKnown RBP14.82□□□□□ -0.04
SP3-201ENST00000310015 CREBRFQ8IUR6 639 aa14.82□□□□□ -0.04
SP3-201ENST00000310015 SLKQ9H2G2 1235 aaPredicted RBP14.81□□□□□ -0.04
SP3-201ENST00000310015 EEA1Q15075 1411 aa14.81□□□□□ -0.04
SP3-201ENST00000310015 HSP90B1P14625 803 aaKnown RBP14.81□□□□□ -0.04
SP3-201ENST00000310015 PTMSP20962 102 aa14.81□□□□□ -0.04
SP3-201ENST00000310015 GOLGA6L1Q8N7Z2 621 aa14.8□□□□□ -0.04
SP3-201ENST00000310015 GOLGA2Q08379 1002 aa14.78□□□□□ -0.04
SP3-201ENST00000310015 TIMELESSQ9UNS1 1208 aa14.78□□□□□ -0.04
SP3-201ENST00000310015 TNIKQ9UKE5 1360 aa14.77□□□□□ -0.04
SP3-201ENST00000310015 TAF7LQ5H9L4 462 aa14.77□□□□□ -0.05
SP3-201ENST00000310015 TSPY4P0CV99 314 aa14.77□□□□□ -0.05
SP3-201ENST00000310015 TSPY10P0CW01 314 aa14.77□□□□□ -0.05
SP3-201ENST00000310015 HSP90AA2PQ14568 343 aaPredicted RBP14.76□□□□□ -0.05
SP3-201ENST00000310015 SETQ01105 290 aaPredicted RBP14.76□□□□□ -0.05
SP3-201ENST00000310015 SCRIBQ14160 1630 aa14.76□□□□□ -0.05
SP3-201ENST00000310015 SIN3AQ96ST3 1273 aa14.76□□□□□ -0.05
SP3-201ENST00000310015 FOXD4L5Q5VV16 416 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms