RNA–Protein interactions for RNA: ENST00000309890.11

ATP2A3-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-201ENST00000309890 ANP32EQ9BTT0 268 aa24.04■■□□□ 1.44
ATP2A3-201ENST00000309890 NBR1Q14596 966 aa24.04■■□□□ 1.44
ATP2A3-201ENST00000309890 SUPT16HQ9Y5B9 1047 aaKnown RBP24.04■■□□□ 1.44
ATP2A3-201ENST00000309890 UPF2Q9HAU5 1272 aaKnown RBP24.03■■□□□ 1.44
ATP2A3-201ENST00000309890 VPS8Q8N3P4 1428 aa24.03■■□□□ 1.44
ATP2A3-201ENST00000309890 KDM2AQ9Y2K7 1162 aa24.01■■□□□ 1.43
ATP2A3-201ENST00000309890 MROH2BQ7Z745 1585 aa24.01■■□□□ 1.43
ATP2A3-201ENST00000309890 SIN3AQ96ST3 1273 aa24■■□□□ 1.43
ATP2A3-201ENST00000309890 TIMELESSQ9UNS1 1208 aa23.99■■□□□ 1.43
ATP2A3-201ENST00000309890 WDR43Q15061 677 aaKnown RBP eCLIP23.97■■□□□ 1.43
ATP2A3-201ENST00000309890 BCL11AQ9H165 835 aa23.96■■□□□ 1.43
ATP2A3-201ENST00000309890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.95■■□□□ 1.42
ATP2A3-201ENST00000309890 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
ATP2A3-201ENST00000309890 FHAD1B1AJZ9 1412 aa23.91■■□□□ 1.42
ATP2A3-201ENST00000309890 CHGAP10645 457 aaKnown RBP23.89■■□□□ 1.42
ATP2A3-201ENST00000309890 ABCC8Q09428 1581 aa23.88■■□□□ 1.41
ATP2A3-201ENST00000309890 PPP4R2Q9NY27 417 aa23.86■■□□□ 1.41
ATP2A3-201ENST00000309890 HSP90AA1P07900 732 aaKnown RBP23.85■■□□□ 1.41
ATP2A3-201ENST00000309890 EIF5BO60841 1220 aaKnown RBP23.85■■□□□ 1.41
ATP2A3-201ENST00000309890 CCER2I3L3R5 266 aa23.84■■□□□ 1.41
ATP2A3-201ENST00000309890 CHMP7Q8WUX9 453 aaPredicted RBP23.82■■□□□ 1.4
ATP2A3-201ENST00000309890 ANP32BQ92688 251 aaKnown RBP23.81■■□□□ 1.4
ATP2A3-201ENST00000309890 SETD5Q9C0A6 1442 aa23.79■■□□□ 1.4
ATP2A3-201ENST00000309890 SLC24A1O60721 1099 aa23.78■■□□□ 1.4
ATP2A3-201ENST00000309890 CARMIL1Q5VZK9 1371 aa23.78■■□□□ 1.4
ATP2A3-201ENST00000309890 PLEKHD1A6NEE1 506 aa23.77■■□□□ 1.4
ATP2A3-201ENST00000309890 KANK4Q5T7N3 995 aaPredicted RBP23.76■■□□□ 1.39
ATP2A3-201ENST00000309890 DDRGK1Q96HY6 314 aa23.76■■□□□ 1.39
ATP2A3-201ENST00000309890 CFDP1Q9UEE9 299 aaPredicted RBP23.76■■□□□ 1.39
ATP2A3-201ENST00000309890 CARD11Q9BXL7 1154 aa23.72■■□□□ 1.39
ATP2A3-201ENST00000309890 CUX2O14529 1486 aa23.72■■□□□ 1.39
ATP2A3-201ENST00000309890 RGL3Q3MIN7 710 aa23.67■■□□□ 1.38
ATP2A3-201ENST00000309890 TOP2AP11388 1531 aaKnown RBP23.67■■□□□ 1.38
ATP2A3-201ENST00000309890 WIZO95785 1651 aa23.66■■□□□ 1.38
ATP2A3-201ENST00000309890 STAG3Q9UJ98 1225 aa23.65■■□□□ 1.38
ATP2A3-201ENST00000309890 RAB3GAP2Q9H2M9 1393 aa23.65■■□□□ 1.38
ATP2A3-201ENST00000309890 NPM1P06748 294 aaKnown RBP eCLIP23.64■■□□□ 1.37
ATP2A3-201ENST00000309890 CDCA8Q53HL2 280 aa23.63■■□□□ 1.37
ATP2A3-201ENST00000309890 SENP3-EIF4A1A0A087X0R7 540 aa23.62■■□□□ 1.37
ATP2A3-201ENST00000309890 ARHGAP35Q9NRY4 1499 aa23.62■■□□□ 1.37
ATP2A3-201ENST00000309890 BECN1Q14457 450 aa23.61■■□□□ 1.37
ATP2A3-201ENST00000309890 B4GALNT3Q6L9W6 998 aa23.61■■□□□ 1.37
ATP2A3-201ENST00000309890 PPM1GO15355 546 aaPredicted RBP23.61■■□□□ 1.37
ATP2A3-201ENST00000309890 RBM19Q9Y4C8 960 aaKnown RBP23.6■■□□□ 1.37
ATP2A3-201ENST00000309890 KNSTRNQ9Y448 316 aa23.59■■□□□ 1.37
ATP2A3-201ENST00000309890 NOP58Q9Y2X3 529 aaKnown RBP23.58■■□□□ 1.37
ATP2A3-201ENST00000309890 ERICH6BQ5W0A0 696 aa23.57■■□□□ 1.36
ATP2A3-201ENST00000309890 ESF1Q9H501 851 aaKnown RBP23.57■■□□□ 1.36
ATP2A3-201ENST00000309890 HSPA5P11021 654 aaKnown RBP23.55■■□□□ 1.36
ATP2A3-201ENST00000309890 PPP1R15AO75807 674 aaPredicted RBP23.54■■□□□ 1.36
ATP2A3-201ENST00000309890 SMARCA2P51531 1590 aa23.53■■□□□ 1.36
ATP2A3-201ENST00000309890 ARXQ96QS3 562 aa23.52■■□□□ 1.35
ATP2A3-201ENST00000309890 GLIPR1L2Q4G1C9 344 aa23.51■■□□□ 1.35
ATP2A3-201ENST00000309890 TSHZ2Q9NRE2 1034 aa23.48■■□□□ 1.35
ATP2A3-201ENST00000309890 KCNH8Q96L42 1107 aa23.48■■□□□ 1.35
ATP2A3-201ENST00000309890 DHX57Q6P158 1386 aaKnown RBP23.46■■□□□ 1.35
ATP2A3-201ENST00000309890 CFAP53Q96M91 514 aa23.46■■□□□ 1.35
ATP2A3-201ENST00000309890 MYH16Q9H6N6 1097 aa23.46■■□□□ 1.35
ATP2A3-201ENST00000309890 RAPGEF2Q9Y4G8 1499 aa23.46■■□□□ 1.35
ATP2A3-201ENST00000309890 FMN1Q68DA7 1419 aa23.43■■□□□ 1.34
ATP2A3-201ENST00000309890 LAS1LQ9Y4W2 734 aaKnown RBP23.4■■□□□ 1.34
ATP2A3-201ENST00000309890 DCAF11Q8TEB1 546 aa23.4■■□□□ 1.34
ATP2A3-201ENST00000309890 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.33
ATP2A3-201ENST00000309890 CC2D1BQ5T0F9 858 aaKnown RBP23.36■■□□□ 1.33
ATP2A3-201ENST00000309890 RGS3P49796 1198 aa23.36■■□□□ 1.33
ATP2A3-201ENST00000309890 EIF4G1Q04637 1599 aaKnown RBP23.36■■□□□ 1.33
ATP2A3-201ENST00000309890 TMF1P82094 1093 aa23.35■■□□□ 1.33
ATP2A3-201ENST00000309890 MPHOSPH9Q99550 1183 aa23.35■■□□□ 1.33
ATP2A3-201ENST00000309890 FTSJ3Q8IY81 847 aaKnown RBP23.31■■□□□ 1.32
ATP2A3-201ENST00000309890 GOLGA6L22H0YM25 854 aa23.31■■□□□ 1.32
ATP2A3-201ENST00000309890 PKD2Q13563 968 aa23.3■■□□□ 1.32
ATP2A3-201ENST00000309890 FOXD1Q16676 465 aa23.3■■□□□ 1.32
ATP2A3-201ENST00000309890 NEUROD2Q15784 382 aa23.29■■□□□ 1.32
ATP2A3-201ENST00000309890 SMARCA4P51532 1647 aa23.29■■□□□ 1.32
ATP2A3-201ENST00000309890 TRIM44Q96DX7 344 aaPredicted RBP23.29■■□□□ 1.32
ATP2A3-201ENST00000309890 DEKP35659 375 aaKnown RBP23.27■■□□□ 1.32
ATP2A3-201ENST00000309890 L3MBTL2Q969R5 705 aa23.25■■□□□ 1.31
ATP2A3-201ENST00000309890 FRAT1Q92837 279 aaPredicted RBP23.25■■□□□ 1.31
ATP2A3-201ENST00000309890 KTN1Q86UP2 1357 aaKnown RBP23.24■■□□□ 1.31
ATP2A3-201ENST00000309890 NUDCQ9Y266 331 aa23.24■■□□□ 1.31
ATP2A3-201ENST00000309890 RALBP1Q15311 655 aa23.23■■□□□ 1.31
ATP2A3-201ENST00000309890 FHOD3Q2V2M9 1422 aa23.22■■□□□ 1.31
ATP2A3-201ENST00000309890 ATAD2BQ9ULI0 1458 aa23.22■■□□□ 1.31
ATP2A3-201ENST00000309890 MAPK8IP3Q9UPT6 1336 aa23.22■■□□□ 1.31
ATP2A3-201ENST00000309890 MS4A1P11836 297 aa23.21■■□□□ 1.31
ATP2A3-201ENST00000309890 RCAN3Q9UKA8 241 aa23.21■■□□□ 1.31
ATP2A3-201ENST00000309890 TCERG1O14776 1098 aaKnown RBP23.19■■□□□ 1.3
ATP2A3-201ENST00000309890 TDRD9Q8NDG6 1382 aaKnown RBP23.18■■□□□ 1.3
ATP2A3-201ENST00000309890 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.3
ATP2A3-201ENST00000309890 NCLP19338 710 aaKnown RBP23.14■■□□□ 1.3
ATP2A3-201ENST00000309890 CHMP4BQ9H444 224 aaKnown RBP23.14■■□□□ 1.29
ATP2A3-201ENST00000309890 NUP155O75694 1391 aa23.14■■□□□ 1.29
ATP2A3-201ENST00000309890 ANKRD30AQ9BXX3 1397 aa23.14■■□□□ 1.29
ATP2A3-201ENST00000309890 RTN4Q9NQC3 1192 aaKnown RBP23.13■■□□□ 1.29
ATP2A3-201ENST00000309890 TNNT2P45379 298 aaPredicted RBP23.12■■□□□ 1.29
ATP2A3-201ENST00000309890 SENP3Q9H4L4 574 aaPredicted RBP23.12■■□□□ 1.29
ATP2A3-201ENST00000309890 ROCK2O75116 1388 aaKnown RBP23.1■■□□□ 1.29
ATP2A3-201ENST00000309890 CASC1Q6TDU7 716 aa23.09■■□□□ 1.29
ATP2A3-201ENST00000309890 PDS5BQ9NTI5 1447 aa23.08■■□□□ 1.29
ATP2A3-201ENST00000309890 PLPPR3Q6T4P5 718 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms