RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 P3H3Q8IVL6 736 aa34.61■■■■□ 3.13
PDLIM2-202ENST00000308354 GRIN2BQ13224 1484 aa34.55■■■■□ 3.12
PDLIM2-202ENST00000308354 CTTNBP2Q8WZ74 1663 aa34.55■■■■□ 3.12
PDLIM2-202ENST00000308354 FHAD1B1AJZ9 1412 aa34.51■■■■□ 3.11
PDLIM2-202ENST00000308354 ADAMTS12P58397 1594 aa34.47■■■■□ 3.11
PDLIM2-202ENST00000308354 EIF4G3O43432 1585 aaKnown RBP34.46■■■■□ 3.11
PDLIM2-202ENST00000308354 KANK4Q5T7N3 995 aaPredicted RBP34.44■■■■□ 3.1
PDLIM2-202ENST00000308354 FHOD3Q2V2M9 1422 aa34.43■■■■□ 3.1
PDLIM2-202ENST00000308354 SNAPC4Q5SXM2 1469 aa34.38■■■■□ 3.09
PDLIM2-202ENST00000308354 EFCAB5A4FU69 1503 aa34.36■■■■□ 3.09
PDLIM2-202ENST00000308354 ATP1B4Q9UN42 357 aaPredicted RBP34.3■■■■□ 3.08
PDLIM2-202ENST00000308354 ZEB1P37275 1124 aaPredicted RBP34.26■■■■□ 3.07
PDLIM2-202ENST00000308354 PCF11O94913 1555 aaKnown RBP34.24■■■■□ 3.07
PDLIM2-202ENST00000308354 SAMD9Q5K651 1589 aa34.22■■■■□ 3.07
PDLIM2-202ENST00000308354 IQGAP2Q13576 1575 aa34.18■■■■□ 3.06
PDLIM2-202ENST00000308354 FBLN2P98095 1184 aa34.18■■■■□ 3.06
PDLIM2-202ENST00000308354 GRIN2AQ12879 1464 aa34.18■■■■□ 3.06
PDLIM2-202ENST00000308354 TIAM1Q13009 1591 aa34.17■■■■□ 3.06
PDLIM2-202ENST00000308354 MAGI1Q96QZ7 1491 aaPredicted RBP34.17■■■■□ 3.06
PDLIM2-202ENST00000308354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.16■■■■□ 3.06
PDLIM2-202ENST00000308354 CHMP7Q8WUX9 453 aaPredicted RBP34.16■■■■□ 3.06
PDLIM2-202ENST00000308354 HNRNPUL2Q1KMD3 747 aaKnown RBP34.15■■■■□ 3.06
PDLIM2-202ENST00000308354 FMN1Q68DA7 1419 aa34.14■■■■□ 3.06
PDLIM2-202ENST00000308354 CASKIN1Q8WXD9 1431 aa34.12■■■■□ 3.05
PDLIM2-202ENST00000308354 FYCO1Q9BQS8 1478 aa34.1■■■■□ 3.05
PDLIM2-202ENST00000308354 SYNJ2O15056 1496 aa34.09■■■■□ 3.05
PDLIM2-202ENST00000308354 MAP3K1Q13233 1512 aa34.09■■■■□ 3.05
PDLIM2-202ENST00000308354 LRRC9Q6ZRR7 1453 aa34.05■■■■□ 3.04
PDLIM2-202ENST00000308354 KIAA0586Q9BVV6 1533 aa34.05■■■■□ 3.04
PDLIM2-202ENST00000308354 CFAP43Q8NDM7 1665 aa34■■■■□ 3.03
PDLIM2-202ENST00000308354 CCER1Q8TC90 406 aaPredicted RBP33.99■■■■□ 3.03
PDLIM2-202ENST00000308354 UGGT2Q9NYU1 1516 aa33.97■■■■□ 3.03
PDLIM2-202ENST00000308354 CEP170Q5SW79 1584 aa33.97■■■■□ 3.03
PDLIM2-202ENST00000308354 RRBP1Q9P2E9 1410 aaKnown RBP33.92■■■■□ 3.02
PDLIM2-202ENST00000308354 DISP1Q96F81 1524 aa33.88■■■■□ 3.01
PDLIM2-202ENST00000308354 LRRIQ1Q96JM4 1722 aa33.87■■■■□ 3.01
PDLIM2-202ENST00000308354 PHLDB1Q86UU1 1377 aa33.86■■■■□ 3.01
PDLIM2-202ENST00000308354 CCNB3Q8WWL7 1395 aa33.86■■■■□ 3.01
PDLIM2-202ENST00000308354 NUP160Q12769 1436 aa33.85■■■■□ 3.01
PDLIM2-202ENST00000308354 KIAA0556O60303 1618 aa33.83■■■■□ 3.01
PDLIM2-202ENST00000308354 ARID3CA6NKF2 412 aa33.79■■■■□ 3
PDLIM2-202ENST00000308354 ITGAEP38570 1179 aa33.77■■■■□ 3
PDLIM2-202ENST00000308354 JPH4Q96JJ6 628 aa33.77■■■■□ 3
PDLIM2-202ENST00000308354 MTUS2Q5JR59 1369 aa33.77■■■■□ 3
PDLIM2-202ENST00000308354 HECW1Q76N89 1606 aa33.71■■■□□ 2.99
PDLIM2-202ENST00000308354 FAM50AQ14320 339 aaKnown RBP33.67■■■□□ 2.98
PDLIM2-202ENST00000308354 EPRSP07814 1512 aaKnown RBP33.67■■■□□ 2.98
PDLIM2-202ENST00000308354 CCDC18Q5T9S5 1454 aa33.66■■■□□ 2.98
PDLIM2-202ENST00000308354 CDK13Q14004 1512 aaKnown RBP33.66■■■□□ 2.98
PDLIM2-202ENST00000308354 CHD1O14646 1710 aa33.65■■■□□ 2.98
PDLIM2-202ENST00000308354 MAGI3Q5TCQ9 1506 aa33.64■■■□□ 2.98
PDLIM2-202ENST00000308354 CARMIL2Q6F5E8 1435 aa33.62■■■□□ 2.97
PDLIM2-202ENST00000308354 EHBP1L1Q8N3D4 1523 aa33.57■■■□□ 2.97
PDLIM2-202ENST00000308354 NCOA2Q15596 1464 aa33.57■■■□□ 2.97
PDLIM2-202ENST00000308354 NUP153P49790 1475 aaKnown RBP33.55■■■□□ 2.96
PDLIM2-202ENST00000308354 RAPGEF6Q8TEU7 1601 aa33.55■■■□□ 2.96
PDLIM2-202ENST00000308354 PLB1Q6P1J6 1458 aa33.54■■■□□ 2.96
PDLIM2-202ENST00000308354 SUPT6HQ7KZ85 1726 aaKnown RBP33.51■■■□□ 2.96
PDLIM2-202ENST00000308354 FGD6Q6ZV73 1430 aa33.51■■■□□ 2.95
PDLIM2-202ENST00000308354 PRG4Q92954 1404 aaPredicted RBP33.5■■■□□ 2.95
PDLIM2-202ENST00000308354 MYOM3Q5VTT5 1437 aa33.44■■■□□ 2.94
PDLIM2-202ENST00000308354 ARHGEF11O15085 1522 aa33.41■■■□□ 2.94
PDLIM2-202ENST00000308354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.37■■■□□ 2.93
PDLIM2-202ENST00000308354 DHX57Q6P158 1386 aaKnown RBP33.34■■■□□ 2.93
PDLIM2-202ENST00000308354 CDK11AQ9UQ88 783 aaPredicted RBP33.33■■■□□ 2.93
PDLIM2-202ENST00000308354 RAB3GAP2Q9H2M9 1393 aa33.33■■■□□ 2.93
PDLIM2-202ENST00000308354 PTPRGP23470 1445 aa33.32■■■□□ 2.92
PDLIM2-202ENST00000308354 ABCA8O94911 1581 aa33.3■■■□□ 2.92
PDLIM2-202ENST00000308354 SHROOM2Q13796 1616 aa33.28■■■□□ 2.92
PDLIM2-202ENST00000308354 SETD5Q9C0A6 1442 aa33.28■■■□□ 2.92
PDLIM2-202ENST00000308354 PTPN23Q9H3S7 1636 aa33.26■■■□□ 2.92
PDLIM2-202ENST00000308354 ERCC6L2Q5T890 1561 aa33.26■■■□□ 2.92
PDLIM2-202ENST00000308354 PTPRKQ15262 1439 aa33.24■■■□□ 2.91
PDLIM2-202ENST00000308354 TROQ12816 1431 aaPredicted RBP33.21■■■□□ 2.91
PDLIM2-202ENST00000308354 ATP10BO94823 1461 aa33.19■■■□□ 2.9
PDLIM2-202ENST00000308354 CLASP1Q7Z460 1538 aa33.19■■■□□ 2.9
PDLIM2-202ENST00000308354 TCOF1Q13428 1488 aaKnown RBP33.15■■■□□ 2.9
PDLIM2-202ENST00000308354 MIA2Q96PC5 1412 aa33.14■■■□□ 2.9
PDLIM2-202ENST00000308354 PLEKHD1A6NEE1 506 aa33.13■■■□□ 2.89
PDLIM2-202ENST00000308354 KIF14Q15058 1648 aa33.11■■■□□ 2.89
PDLIM2-202ENST00000308354 CHIC2Q9UKJ5 165 aa33.09■■■□□ 2.89
PDLIM2-202ENST00000308354 UACAQ9BZF9 1416 aa33.09■■■□□ 2.89
PDLIM2-202ENST00000308354 ZNF644Q9H582 1327 aaPredicted RBP33.09■■■□□ 2.89
PDLIM2-202ENST00000308354 CLSPNQ9HAW4 1339 aa33.09■■■□□ 2.89
PDLIM2-202ENST00000308354 HFM1A2PYH4 1435 aa33.02■■■□□ 2.88
PDLIM2-202ENST00000308354 RRP7BPQ9NSQ0 103 aa33.01■■■□□ 2.87
PDLIM2-202ENST00000308354 CFDP1Q9UEE9 299 aaPredicted RBP33.01■■■□□ 2.87
PDLIM2-202ENST00000308354 ADCY10Q96PN6 1610 aa33.01■■■□□ 2.87
PDLIM2-202ENST00000308354 GPATCH8Q9UKJ3 1502 aaKnown RBP33■■■□□ 2.87
PDLIM2-202ENST00000308354 NAIPQ13075 1403 aa32.98■■■□□ 2.87
PDLIM2-202ENST00000308354 ZNF777Q9ULD5 760 aaPredicted RBP32.97■■■□□ 2.87
PDLIM2-202ENST00000308354 MAPKBP1O60336 1514 aa32.95■■■□□ 2.87
PDLIM2-202ENST00000308354 ABCC2Q92887 1545 aa32.93■■■□□ 2.86
PDLIM2-202ENST00000308354 DAPK1P53355 1430 aa32.9■■■□□ 2.86
PDLIM2-202ENST00000308354 ABCC10Q5T3U5 1492 aa32.9■■■□□ 2.86
PDLIM2-202ENST00000308354 ITSN2Q9NZM3 1697 aa32.9■■■□□ 2.86
PDLIM2-202ENST00000308354 CAMSAP2Q08AD1 1489 aa32.89■■■□□ 2.85
PDLIM2-202ENST00000308354 ABCC5O15440 1437 aa32.88■■■□□ 2.85
PDLIM2-202ENST00000308354 OSCARQ8IYS5 282 aa32.85■■■□□ 2.85
PDLIM2-202ENST00000308354 DNMT1P26358 1616 aaKnown RBP32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms