RNA–Protein interactions for RNA: ENST00000307792.7

SEMA3E-201, Transcript of semaphorin 3E, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3E, Length 6,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3E-201ENST00000307792 CLSPNQ9HAW4 1339 aa13.94□□□□□ -0.18
SEMA3E-201ENST00000307792 CANXP27824 592 aaKnown RBP13.93□□□□□ -0.18
SEMA3E-201ENST00000307792 CLIP1P30622 1438 aa13.93□□□□□ -0.18
SEMA3E-201ENST00000307792 MEX3CQ5U5Q3 659 aaKnown RBP13.93□□□□□ -0.18
SEMA3E-201ENST00000307792 CCDC9Q9Y3X0 531 aaKnown RBP13.91□□□□□ -0.18
SEMA3E-201ENST00000307792 FOXD1Q16676 465 aa13.9□□□□□ -0.18
SEMA3E-201ENST00000307792 SOGA1O94964 1423 aa13.88□□□□□ -0.19
SEMA3E-201ENST00000307792 ARXQ96QS3 562 aa13.87□□□□□ -0.19
SEMA3E-201ENST00000307792 YTHDC1Q96MU7 727 aaKnown RBP13.87□□□□□ -0.19
SEMA3E-201ENST00000307792 BCL11AQ9H165 835 aa13.87□□□□□ -0.19
SEMA3E-201ENST00000307792 POGKQ9P215 609 aa13.86□□□□□ -0.19
SEMA3E-201ENST00000307792 EID1Q9Y6B2 187 aa13.86□□□□□ -0.19
SEMA3E-201ENST00000307792 CUX2O14529 1486 aa13.83□□□□□ -0.19
SEMA3E-201ENST00000307792 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
SEMA3E-201ENST00000307792 GGT6Q6P531 493 aa13.82□□□□□ -0.2
SEMA3E-201ENST00000307792 FAM69CQ0P6D2 419 aa13.82□□□□□ -0.2
SEMA3E-201ENST00000307792 CADPSQ9ULU8 1353 aa13.8□□□□□ -0.2
SEMA3E-201ENST00000307792 ACIN1Q9UKV3 1341 aaKnown RBP13.78□□□□□ -0.2
SEMA3E-201ENST00000307792 DCAF1Q9Y4B6 1507 aa13.78□□□□□ -0.2
SEMA3E-201ENST00000307792 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.2
SEMA3E-201ENST00000307792 TDRD9Q8NDG6 1382 aaKnown RBP13.77□□□□□ -0.21
SEMA3E-201ENST00000307792 EFCAB2Q5VUJ9 269 aa13.77□□□□□ -0.21
SEMA3E-201ENST00000307792 TMC1Q8TDI8 760 aa13.75□□□□□ -0.21
SEMA3E-201ENST00000307792 ABCC8Q09428 1581 aa13.74□□□□□ -0.21
SEMA3E-201ENST00000307792 TONSLQ96HA7 1378 aa13.74□□□□□ -0.21
SEMA3E-201ENST00000307792 CARMIL1Q5VZK9 1371 aa13.73□□□□□ -0.21
SEMA3E-201ENST00000307792 RRP7BPQ9NSQ0 103 aa13.71□□□□□ -0.21
SEMA3E-201ENST00000307792 ANP32CO43423 234 aa13.7□□□□□ -0.22
SEMA3E-201ENST00000307792 TMX4Q9H1E5 349 aaPredicted RBP13.69□□□□□ -0.22
SEMA3E-201ENST00000307792 RGL3Q3MIN7 710 aa13.69□□□□□ -0.22
SEMA3E-201ENST00000307792 FANCD2Q9BXW9 1451 aa13.69□□□□□ -0.22
SEMA3E-201ENST00000307792 EEA1Q15075 1411 aa13.68□□□□□ -0.22
SEMA3E-201ENST00000307792 CSB-PGBD3P0DP91 1061 aa13.67□□□□□ -0.22
SEMA3E-201ENST00000307792 JPH4Q96JJ6 628 aa13.67□□□□□ -0.22
SEMA3E-201ENST00000307792 PAK3O75914 559 aaPredicted RBP13.65□□□□□ -0.22
SEMA3E-201ENST00000307792 EIF4G2P78344 907 aaKnown RBP eCLIP13.64□□□□□ -0.23
SEMA3E-201ENST00000307792 GOLGA3Q08378 1498 aa13.63□□□□□ -0.23
SEMA3E-201ENST00000307792 PPM1GO15355 546 aaPredicted RBP13.62□□□□□ -0.23
SEMA3E-201ENST00000307792 CDCA8Q53HL2 280 aa13.61□□□□□ -0.23
SEMA3E-201ENST00000307792 SF3B2Q13435 895 aaKnown RBP13.61□□□□□ -0.23
SEMA3E-201ENST00000307792 PTPRGP23470 1445 aa13.6□□□□□ -0.23
SEMA3E-201ENST00000307792 MYO15BQ96JP2 1530 aa13.6□□□□□ -0.23
SEMA3E-201ENST00000307792 ATAD2BQ9ULI0 1458 aa13.59□□□□□ -0.23
SEMA3E-201ENST00000307792 WDR43Q15061 677 aaKnown RBP eCLIP13.59□□□□□ -0.23
SEMA3E-201ENST00000307792 WASHC2CQ9Y4E1 1318 aa13.59□□□□□ -0.23
SEMA3E-201ENST00000307792 ZNF316A6NFI3 1004 aaPredicted RBP13.58□□□□□ -0.23
SEMA3E-201ENST00000307792 FHAD1B1AJZ9 1412 aa13.58□□□□□ -0.23
SEMA3E-201ENST00000307792 CC2D2AQ9P2K1 1620 aa13.57□□□□□ -0.24
SEMA3E-201ENST00000307792 CFAP53Q96M91 514 aa13.57□□□□□ -0.24
SEMA3E-201ENST00000307792 SPAG9O60271 1321 aaKnown RBP13.56□□□□□ -0.24
SEMA3E-201ENST00000307792 KIF3BO15066 747 aa13.54□□□□□ -0.24
SEMA3E-201ENST00000307792 MRC2Q9UBG0 1479 aa13.54□□□□□ -0.24
SEMA3E-201ENST00000307792 SRPK2P78362 688 aaKnown RBP13.53□□□□□ -0.24
SEMA3E-201ENST00000307792 SOX12O15370 315 aa13.52□□□□□ -0.24
SEMA3E-201ENST00000307792 EVA1CP58658 441 aa13.52□□□□□ -0.24
SEMA3E-201ENST00000307792 MSH5O43196 834 aa13.52□□□□□ -0.25
SEMA3E-201ENST00000307792 STK26Q9P289 416 aa13.52□□□□□ -0.25
SEMA3E-201ENST00000307792 CCDC88BA6NC98 1476 aa13.5□□□□□ -0.25
SEMA3E-201ENST00000307792 ATF3P18847 181 aa13.49□□□□□ -0.25
SEMA3E-201ENST00000307792 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
SEMA3E-201ENST00000307792 GOLGA2Q08379 1002 aa13.49□□□□□ -0.25
SEMA3E-201ENST00000307792 KLHL34Q8N239 644 aa13.49□□□□□ -0.25
SEMA3E-201ENST00000307792 TOP2AP11388 1531 aaKnown RBP13.47□□□□□ -0.25
SEMA3E-201ENST00000307792 SMARCA4P51532 1647 aa13.47□□□□□ -0.25
SEMA3E-201ENST00000307792 SAFB2Q14151 953 aaKnown RBP eCLIP13.46□□□□□ -0.25
SEMA3E-201ENST00000307792 POGZQ7Z3K3 1410 aa13.46□□□□□ -0.26
SEMA3E-201ENST00000307792 NGDNQ8NEJ9 315 aaKnown RBP13.45□□□□□ -0.26
SEMA3E-201ENST00000307792 MYH16Q9H6N6 1097 aa13.45□□□□□ -0.26
SEMA3E-201ENST00000307792 G3V3G9 751 aa13.45□□□□□ -0.26
SEMA3E-201ENST00000307792 DCAF8Q5TAQ9 597 aa13.45□□□□□ -0.26
SEMA3E-201ENST00000307792 HDGFL2Q7Z4V5 671 aaPredicted RBP13.44□□□□□ -0.26
SEMA3E-201ENST00000307792 NUDCQ9Y266 331 aa13.44□□□□□ -0.26
SEMA3E-201ENST00000307792 PIP4K2BP78356 416 aa13.44□□□□□ -0.26
SEMA3E-201ENST00000307792 RSPH4AQ5TD94 716 aa13.44□□□□□ -0.26
SEMA3E-201ENST00000307792 FMN1Q68DA7 1419 aa13.42□□□□□ -0.26
SEMA3E-201ENST00000307792 GAPVD1Q14C86 1478 aa13.41□□□□□ -0.26
SEMA3E-201ENST00000307792 KNSTRNQ9Y448 316 aa13.41□□□□□ -0.26
SEMA3E-201ENST00000307792 MAPK8IP3Q9UPT6 1336 aa13.41□□□□□ -0.26
SEMA3E-201ENST00000307792 IFT140Q96RY7 1462 aa13.4□□□□□ -0.26
SEMA3E-201ENST00000307792 PNNQ9H307 717 aaKnown RBP13.4□□□□□ -0.26
SEMA3E-201ENST00000307792 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
SEMA3E-201ENST00000307792 HNRNPMP52272 730 aaKnown RBP eCLIP13.39□□□□□ -0.27
SEMA3E-201ENST00000307792 DMRT2Q9Y5R5 561 aa13.38□□□□□ -0.27
SEMA3E-201ENST00000307792 ZNF330Q9Y3S2 320 aaPredicted RBP13.37□□□□□ -0.27
SEMA3E-201ENST00000307792 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.37□□□□□ -0.27
SEMA3E-201ENST00000307792 CARD11Q9BXL7 1154 aa13.37□□□□□ -0.27
SEMA3E-201ENST00000307792 CCDC18Q5T9S5 1454 aa13.37□□□□□ -0.27
SEMA3E-201ENST00000307792 CEP162Q5TB80 1403 aa13.36□□□□□ -0.27
SEMA3E-201ENST00000307792 ANKRD30AQ9BXX3 1397 aa13.36□□□□□ -0.27
SEMA3E-201ENST00000307792 RAPGEF2Q9Y4G8 1499 aa13.35□□□□□ -0.27
SEMA3E-201ENST00000307792 NCAPD3P42695 1498 aa13.35□□□□□ -0.27
SEMA3E-201ENST00000307792 WIZO95785 1651 aa13.35□□□□□ -0.27
SEMA3E-201ENST00000307792 AQRO60306 1485 aaKnown RBP eCLIP13.34□□□□□ -0.27
SEMA3E-201ENST00000307792 GRIN2BQ13224 1484 aa13.34□□□□□ -0.27
SEMA3E-201ENST00000307792 RTF1Q92541 710 aaKnown RBP13.34□□□□□ -0.27
SEMA3E-201ENST00000307792 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.33□□□□□ -0.28
SEMA3E-201ENST00000307792 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.28
SEMA3E-201ENST00000307792 LAS1LQ9Y4W2 734 aaKnown RBP13.33□□□□□ -0.28
SEMA3E-201ENST00000307792 NUTM2DQ5VT03 806 aaPredicted RBP13.32□□□□□ -0.28
SEMA3E-201ENST00000307792 NUTM2BA6NNL0 878 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms