RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 FAM9BQ8IZU0 186 aa25.07■■□□□ 1.6
BPTF-201ENST00000306378 CFAP44Q96MT7 982 aa25.07■■□□□ 1.6
BPTF-201ENST00000306378 MRS2Q9HD23 443 aa25.06■■□□□ 1.6
BPTF-201ENST00000306378 PNNQ9H307 717 aaKnown RBP25.04■■□□□ 1.6
BPTF-201ENST00000306378 PPP4R2Q9NY27 417 aa25.02■■□□□ 1.6
BPTF-201ENST00000306378 KIAA2012Q0VF49 1180 aa25■■□□□ 1.59
BPTF-201ENST00000306378 RTN4Q9NQC3 1192 aaKnown RBP24.97■■□□□ 1.59
BPTF-201ENST00000306378 CALRP27797 417 aaKnown RBP24.97■■□□□ 1.59
BPTF-201ENST00000306378 SETQ01105 290 aaPredicted RBP24.96■■□□□ 1.59
BPTF-201ENST00000306378 HSP90AA2PQ14568 343 aaPredicted RBP24.95■■□□□ 1.58
BPTF-201ENST00000306378 DDX10Q13206 875 aaKnown RBP24.93■■□□□ 1.58
BPTF-201ENST00000306378 GOLGA6L1Q8N7Z2 621 aa24.9■■□□□ 1.58
BPTF-201ENST00000306378 A0A0U1RQG5 324 aaPredicted RBP24.88■■□□□ 1.57
BPTF-201ENST00000306378 HSCBQ8IWL3 235 aa24.87■■□□□ 1.57
BPTF-201ENST00000306378 MS4A1P11836 297 aa24.87■■□□□ 1.57
BPTF-201ENST00000306378 SYAP1Q96A49 352 aaPredicted RBP24.87■■□□□ 1.57
BPTF-201ENST00000306378 MIER1Q8N108 512 aa24.84■■□□□ 1.57
BPTF-201ENST00000306378 GBP4Q96PP9 640 aa24.84■■□□□ 1.57
BPTF-201ENST00000306378 LAS1LQ9Y4W2 734 aaKnown RBP24.81■■□□□ 1.56
BPTF-201ENST00000306378 HSP90AB1P08238 724 aaKnown RBP24.81■■□□□ 1.56
BPTF-201ENST00000306378 FTSJ3Q8IY81 847 aaKnown RBP24.77■■□□□ 1.56
BPTF-201ENST00000306378 GOLGA6L3A6NEY3 463 aa24.77■■□□□ 1.56
BPTF-201ENST00000306378 SUPT16HQ9Y5B9 1047 aaKnown RBP24.77■■□□□ 1.56
BPTF-201ENST00000306378 PHF14O94880 888 aa24.73■■□□□ 1.55
BPTF-201ENST00000306378 GOLGA6L4A6NEF3 574 aa24.71■■□□□ 1.55
BPTF-201ENST00000306378 EIF4G2P78344 907 aaKnown RBP eCLIP24.69■■□□□ 1.54
BPTF-201ENST00000306378 DRC7Q8IY82 874 aa24.69■■□□□ 1.54
BPTF-201ENST00000306378 MTERF4Q7Z6M4 381 aaKnown RBP24.68■■□□□ 1.54
BPTF-201ENST00000306378 MCCP23508 829 aa24.65■■□□□ 1.54
BPTF-201ENST00000306378 CDCA8Q53HL2 280 aa24.65■■□□□ 1.54
BPTF-201ENST00000306378 RBM19Q9Y4C8 960 aaKnown RBP24.61■■□□□ 1.53
BPTF-201ENST00000306378 HTATSF1O43719 755 aaKnown RBP24.6■■□□□ 1.53
BPTF-201ENST00000306378 IRX6P78412 446 aaPredicted RBP24.6■■□□□ 1.53
BPTF-201ENST00000306378 AMER1Q5JTC6 1135 aaPredicted RBP24.6■■□□□ 1.53
BPTF-201ENST00000306378 NOC3LQ8WTT2 800 aaKnown RBP24.59■■□□□ 1.53
BPTF-201ENST00000306378 EEA1Q15075 1411 aa24.58■■□□□ 1.53
BPTF-201ENST00000306378 PLCB2Q00722 1185 aa24.57■■□□□ 1.52
BPTF-201ENST00000306378 NOM1Q5C9Z4 860 aaKnown RBP24.56■■□□□ 1.52
BPTF-201ENST00000306378 CFAP53Q96M91 514 aa24.55■■□□□ 1.52
BPTF-201ENST00000306378 GPS2Q13227 327 aa24.54■■□□□ 1.52
BPTF-201ENST00000306378 CSRNP3Q8WYN3 585 aa24.54■■□□□ 1.52
BPTF-201ENST00000306378 MAP7D2Q96T17 732 aa24.54■■□□□ 1.52
BPTF-201ENST00000306378 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.53■■□□□ 1.52
BPTF-201ENST00000306378 CSPP1Q1MSJ5 1256 aa24.53■■□□□ 1.52
BPTF-201ENST00000306378 TPM4P67936 248 aa24.52■■□□□ 1.52
BPTF-201ENST00000306378 CCDC34Q96HJ3 373 aa24.51■■□□□ 1.51
BPTF-201ENST00000306378 DDX11L8A8MPP1 907 aa24.5■■□□□ 1.51
BPTF-201ENST00000306378 TCERG1O14776 1098 aaKnown RBP24.48■■□□□ 1.51
BPTF-201ENST00000306378 TEX35Q5T0J7 233 aa24.48■■□□□ 1.51
BPTF-201ENST00000306378 CCER2I3L3R5 266 aa24.47■■□□□ 1.51
BPTF-201ENST00000306378 IPO9Q96P70 1041 aaKnown RBP24.46■■□□□ 1.51
BPTF-201ENST00000306378 SALL2Q9Y467 1007 aaPredicted RBP24.43■■□□□ 1.5
BPTF-201ENST00000306378 VSIG10Q8N0Z9 540 aa24.43■■□□□ 1.5
BPTF-201ENST00000306378 CLIP1P30622 1438 aa24.41■■□□□ 1.5
BPTF-201ENST00000306378 FGD1P98174 961 aa24.41■■□□□ 1.5
BPTF-201ENST00000306378 RSF1Q96T23 1441 aaPredicted RBP24.41■■□□□ 1.5
BPTF-201ENST00000306378 KNSTRNQ9Y448 316 aa24.39■■□□□ 1.49
BPTF-201ENST00000306378 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.38■■□□□ 1.49
BPTF-201ENST00000306378 HAP1P54257 671 aaPredicted RBP24.37■■□□□ 1.49
BPTF-201ENST00000306378 SKOR2Q2VWA4 1001 aaPredicted RBP24.37■■□□□ 1.49
BPTF-201ENST00000306378 RGS3P49796 1198 aa24.37■■□□□ 1.49
BPTF-201ENST00000306378 APPP05067 770 aa24.36■■□□□ 1.49
BPTF-201ENST00000306378 GOLGA3Q08378 1498 aa24.35■■□□□ 1.49
BPTF-201ENST00000306378 TAF3Q5VWG9 929 aa24.34■■□□□ 1.49
BPTF-201ENST00000306378 CWC15Q9P013 229 aaKnown RBP24.34■■□□□ 1.49
BPTF-201ENST00000306378 CCDC70Q6NSX1 233 aa24.33■■□□□ 1.49
BPTF-201ENST00000306378 PKNOX2Q96KN3 472 aa24.31■■□□□ 1.48
BPTF-201ENST00000306378 CCDC66A2RUB6 948 aa24.31■■□□□ 1.48
BPTF-201ENST00000306378 CALD1Q05682 793 aaKnown RBP24.31■■□□□ 1.48
BPTF-201ENST00000306378 ZNF771Q7L3S4 317 aaPredicted RBP24.31■■□□□ 1.48
BPTF-201ENST00000306378 KCNJ4P48050 445 aa24.3■■□□□ 1.48
BPTF-201ENST00000306378 MTUS2Q5JR59 1369 aa24.27■■□□□ 1.48
BPTF-201ENST00000306378 TIMELESSQ9UNS1 1208 aa24.26■■□□□ 1.47
BPTF-201ENST00000306378 ESF1Q9H501 851 aaKnown RBP24.26■■□□□ 1.47
BPTF-201ENST00000306378 KIF16BQ96L93 1317 aa24.25■■□□□ 1.47
BPTF-201ENST00000306378 GSE1Q14687 1217 aa24.24■■□□□ 1.47
BPTF-201ENST00000306378 MAPK8IP3Q9UPT6 1336 aa24.23■■□□□ 1.47
BPTF-201ENST00000306378 FANCIQ9NVI1 1328 aa24.22■■□□□ 1.47
BPTF-201ENST00000306378 GNL2Q13823 731 aaKnown RBP24.21■■□□□ 1.47
BPTF-201ENST00000306378 TPM3P06753 285 aa24.21■■□□□ 1.47
BPTF-201ENST00000306378 PHLDB1Q86UU1 1377 aa24.2■■□□□ 1.47
BPTF-201ENST00000306378 STAG3Q9UJ98 1225 aa24.2■■□□□ 1.46
BPTF-201ENST00000306378 KIAA1211Q6ZU35 1233 aa24.18■■□□□ 1.46
BPTF-201ENST00000306378 B4GALNT3Q6L9W6 998 aa24.18■■□□□ 1.46
BPTF-201ENST00000306378 ATP6V1DQ9Y5K8 247 aa24.17■■□□□ 1.46
BPTF-201ENST00000306378 NUDCQ9Y266 331 aa24.17■■□□□ 1.46
BPTF-201ENST00000306378 CEP162Q5TB80 1403 aa24.16■■□□□ 1.46
BPTF-201ENST00000306378 ACBD3Q9H3P7 528 aa24.16■■□□□ 1.46
BPTF-201ENST00000306378 ARID3AQ99856 593 aa24.15■■□□□ 1.46
BPTF-201ENST00000306378 ZNF777Q9ULD5 760 aaPredicted RBP24.15■■□□□ 1.46
BPTF-201ENST00000306378 SCRIBQ14160 1630 aa24.14■■□□□ 1.45
BPTF-201ENST00000306378 TPM2P07951 284 aa24.14■■□□□ 1.45
BPTF-201ENST00000306378 HMMRO75330 724 aa24.14■■□□□ 1.45
BPTF-201ENST00000306378 IPO8O15397 1037 aaKnown RBP24.13■■□□□ 1.45
BPTF-201ENST00000306378 KIF3AQ9Y496 699 aa24.12■■□□□ 1.45
BPTF-201ENST00000306378 ARGLU1Q9NWB6 273 aaPredicted RBP24.12■■□□□ 1.45
BPTF-201ENST00000306378 CHMP4CQ96CF2 233 aa24.12■■□□□ 1.45
BPTF-201ENST00000306378 PODXL2Q9NZ53 605 aa24.09■■□□□ 1.45
BPTF-201ENST00000306378 GZF1Q9H116 711 aaPredicted RBP24.09■■□□□ 1.45
BPTF-201ENST00000306378 RRP12Q5JTH9 1297 aaKnown RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms