RNA–Protein interactions for RNA: ENST00000306006.10

ZNF239-201, Transcript of zinc finger protein 239, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF239, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-201ENST00000306006 ZNF608Q9ULD9 1512 aaPredicted RBP14.61□□□□□ -0.07
ZNF239-201ENST00000306006 GRIN2BQ13224 1484 aa14.58□□□□□ -0.08
ZNF239-201ENST00000306006 FHAD1B1AJZ9 1412 aa14.57□□□□□ -0.08
ZNF239-201ENST00000306006 P3H3Q8IVL6 736 aa14.56□□□□□ -0.08
ZNF239-201ENST00000306006 ADAMTS12P58397 1594 aa14.56□□□□□ -0.08
ZNF239-201ENST00000306006 EFCAB5A4FU69 1503 aa14.54□□□□□ -0.08
ZNF239-201ENST00000306006 KANK4Q5T7N3 995 aaPredicted RBP14.54□□□□□ -0.08
ZNF239-201ENST00000306006 EIF4G3O43432 1585 aaKnown RBP14.53□□□□□ -0.08
ZNF239-201ENST00000306006 FHOD3Q2V2M9 1422 aa14.53□□□□□ -0.08
ZNF239-201ENST00000306006 SNAPC4Q5SXM2 1469 aa14.49□□□□□ -0.09
ZNF239-201ENST00000306006 SAMD9Q5K651 1589 aa14.48□□□□□ -0.09
ZNF239-201ENST00000306006 PCF11O94913 1555 aaKnown RBP14.48□□□□□ -0.09
ZNF239-201ENST00000306006 TIAM1Q13009 1591 aa14.46□□□□□ -0.09
ZNF239-201ENST00000306006 MAP3K1Q13233 1512 aa14.46□□□□□ -0.09
ZNF239-201ENST00000306006 IQGAP2Q13576 1575 aa14.44□□□□□ -0.1
ZNF239-201ENST00000306006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.44□□□□□ -0.1
ZNF239-201ENST00000306006 CASKIN1Q8WXD9 1431 aa14.43□□□□□ -0.1
ZNF239-201ENST00000306006 ZEB1P37275 1124 aaPredicted RBP14.43□□□□□ -0.1
ZNF239-201ENST00000306006 FMN1Q68DA7 1419 aa14.43□□□□□ -0.1
ZNF239-201ENST00000306006 FYCO1Q9BQS8 1478 aa14.43□□□□□ -0.1
ZNF239-201ENST00000306006 MAGI1Q96QZ7 1491 aaPredicted RBP14.42□□□□□ -0.1
ZNF239-201ENST00000306006 ATP1B4Q9UN42 357 aaPredicted RBP14.42□□□□□ -0.1
ZNF239-201ENST00000306006 GRIN2AQ12879 1464 aa14.42□□□□□ -0.1
ZNF239-201ENST00000306006 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
ZNF239-201ENST00000306006 CFAP43Q8NDM7 1665 aa14.4□□□□□ -0.1
ZNF239-201ENST00000306006 LRRC9Q6ZRR7 1453 aa14.4□□□□□ -0.1
ZNF239-201ENST00000306006 SYNJ2O15056 1496 aa14.39□□□□□ -0.11
ZNF239-201ENST00000306006 KIAA0586Q9BVV6 1533 aa14.38□□□□□ -0.11
ZNF239-201ENST00000306006 CCER1Q8TC90 406 aaPredicted RBP14.38□□□□□ -0.11
ZNF239-201ENST00000306006 RRBP1Q9P2E9 1410 aaKnown RBP14.37□□□□□ -0.11
ZNF239-201ENST00000306006 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
ZNF239-201ENST00000306006 UGGT2Q9NYU1 1516 aa14.37□□□□□ -0.11
ZNF239-201ENST00000306006 FBLN2P98095 1184 aa14.34□□□□□ -0.11
ZNF239-201ENST00000306006 CEP170Q5SW79 1584 aa14.33□□□□□ -0.12
ZNF239-201ENST00000306006 LRRIQ1Q96JM4 1722 aa14.32□□□□□ -0.12
ZNF239-201ENST00000306006 CCNB3Q8WWL7 1395 aa14.32□□□□□ -0.12
ZNF239-201ENST00000306006 PHLDB1Q86UU1 1377 aa14.31□□□□□ -0.12
ZNF239-201ENST00000306006 DISP1Q96F81 1524 aa14.3□□□□□ -0.12
ZNF239-201ENST00000306006 NUP160Q12769 1436 aa14.29□□□□□ -0.12
ZNF239-201ENST00000306006 KIAA0556O60303 1618 aa14.29□□□□□ -0.12
ZNF239-201ENST00000306006 MTUS2Q5JR59 1369 aa14.26□□□□□ -0.13
ZNF239-201ENST00000306006 HECW1Q76N89 1606 aa14.25□□□□□ -0.13
ZNF239-201ENST00000306006 CCDC18Q5T9S5 1454 aa14.24□□□□□ -0.13
ZNF239-201ENST00000306006 JPH4Q96JJ6 628 aa14.23□□□□□ -0.13
ZNF239-201ENST00000306006 EPRSP07814 1512 aaKnown RBP14.22□□□□□ -0.13
ZNF239-201ENST00000306006 ITGAEP38570 1179 aa14.22□□□□□ -0.13
ZNF239-201ENST00000306006 MAGI3Q5TCQ9 1506 aa14.21□□□□□ -0.13
ZNF239-201ENST00000306006 EHBP1L1Q8N3D4 1523 aa14.21□□□□□ -0.14
ZNF239-201ENST00000306006 CDK13Q14004 1512 aaKnown RBP14.2□□□□□ -0.14
ZNF239-201ENST00000306006 FAM50AQ14320 339 aaKnown RBP14.19□□□□□ -0.14
ZNF239-201ENST00000306006 NCOA2Q15596 1464 aa14.19□□□□□ -0.14
ZNF239-201ENST00000306006 CHD1O14646 1710 aa14.19□□□□□ -0.14
ZNF239-201ENST00000306006 CARMIL2Q6F5E8 1435 aa14.18□□□□□ -0.14
ZNF239-201ENST00000306006 ARID3CA6NKF2 412 aa14.18□□□□□ -0.14
ZNF239-201ENST00000306006 SUPT6HQ7KZ85 1726 aaKnown RBP14.18□□□□□ -0.14
ZNF239-201ENST00000306006 RAPGEF6Q8TEU7 1601 aa14.17□□□□□ -0.14
ZNF239-201ENST00000306006 FGD6Q6ZV73 1430 aa14.17□□□□□ -0.14
ZNF239-201ENST00000306006 NUP153P49790 1475 aaKnown RBP14.17□□□□□ -0.14
ZNF239-201ENST00000306006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.15□□□□□ -0.14
ZNF239-201ENST00000306006 ARHGEF11O15085 1522 aa14.15□□□□□ -0.14
ZNF239-201ENST00000306006 MYOM3Q5VTT5 1437 aa14.14□□□□□ -0.15
ZNF239-201ENST00000306006 PLB1Q6P1J6 1458 aa14.14□□□□□ -0.15
ZNF239-201ENST00000306006 DHX57Q6P158 1386 aaKnown RBP14.12□□□□□ -0.15
ZNF239-201ENST00000306006 PRG4Q92954 1404 aaPredicted RBP14.11□□□□□ -0.15
ZNF239-201ENST00000306006 RAB3GAP2Q9H2M9 1393 aa14.1□□□□□ -0.15
ZNF239-201ENST00000306006 SETD5Q9C0A6 1442 aa14.09□□□□□ -0.15
ZNF239-201ENST00000306006 ABCA8O94911 1581 aa14.07□□□□□ -0.16
ZNF239-201ENST00000306006 PTPN23Q9H3S7 1636 aa14.07□□□□□ -0.16
ZNF239-201ENST00000306006 SHROOM2Q13796 1616 aa14.06□□□□□ -0.16
ZNF239-201ENST00000306006 CDK11AQ9UQ88 783 aaPredicted RBP14.06□□□□□ -0.16
ZNF239-201ENST00000306006 CLSPNQ9HAW4 1339 aa14.05□□□□□ -0.16
ZNF239-201ENST00000306006 PTPRKQ15262 1439 aa14.05□□□□□ -0.16
ZNF239-201ENST00000306006 TCOF1Q13428 1488 aaKnown RBP14.04□□□□□ -0.16
ZNF239-201ENST00000306006 PTPRGP23470 1445 aa14.04□□□□□ -0.16
ZNF239-201ENST00000306006 TROQ12816 1431 aaPredicted RBP14.03□□□□□ -0.16
ZNF239-201ENST00000306006 MIA2Q96PC5 1412 aa14.03□□□□□ -0.16
ZNF239-201ENST00000306006 ATP10BO94823 1461 aa14.01□□□□□ -0.17
ZNF239-201ENST00000306006 CLASP1Q7Z460 1538 aa14.01□□□□□ -0.17
ZNF239-201ENST00000306006 ERCC6L2Q5T890 1561 aa14.01□□□□□ -0.17
ZNF239-201ENST00000306006 HFM1A2PYH4 1435 aa13.98□□□□□ -0.17
ZNF239-201ENST00000306006 KIF14Q15058 1648 aa13.98□□□□□ -0.17
ZNF239-201ENST00000306006 ADCY10Q96PN6 1610 aa13.98□□□□□ -0.17
ZNF239-201ENST00000306006 PLEKHD1A6NEE1 506 aa13.96□□□□□ -0.17
ZNF239-201ENST00000306006 MAPKBP1O60336 1514 aa13.96□□□□□ -0.17
ZNF239-201ENST00000306006 UACAQ9BZF9 1416 aa13.96□□□□□ -0.17
ZNF239-201ENST00000306006 NAIPQ13075 1403 aa13.95□□□□□ -0.18
ZNF239-201ENST00000306006 ZNF644Q9H582 1327 aaPredicted RBP13.94□□□□□ -0.18
ZNF239-201ENST00000306006 CHIC2Q9UKJ5 165 aa13.94□□□□□ -0.18
ZNF239-201ENST00000306006 GPATCH8Q9UKJ3 1502 aaKnown RBP13.94□□□□□ -0.18
ZNF239-201ENST00000306006 ITSN2Q9NZM3 1697 aa13.92□□□□□ -0.18
ZNF239-201ENST00000306006 RRP7BPQ9NSQ0 103 aa13.91□□□□□ -0.18
ZNF239-201ENST00000306006 CFDP1Q9UEE9 299 aaPredicted RBP13.91□□□□□ -0.18
ZNF239-201ENST00000306006 ABCC10Q5T3U5 1492 aa13.91□□□□□ -0.18
ZNF239-201ENST00000306006 DAPK1P53355 1430 aa13.91□□□□□ -0.18
ZNF239-201ENST00000306006 ABCC2Q92887 1545 aa13.9□□□□□ -0.18
ZNF239-201ENST00000306006 DNMT1P26358 1616 aaKnown RBP13.9□□□□□ -0.18
ZNF239-201ENST00000306006 ABCC5O15440 1437 aa13.9□□□□□ -0.18
ZNF239-201ENST00000306006 AKNAQ7Z591 1439 aa13.9□□□□□ -0.18
ZNF239-201ENST00000306006 CAMSAP2Q08AD1 1489 aa13.89□□□□□ -0.19
ZNF239-201ENST00000306006 GCC2Q8IWJ2 1684 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms