RNA–Protein interactions for RNA: ENST00000296799.8

ARHGEF28-202, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGEF28, Length 4,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-202ENST00000296799 ABCC8Q09428 1581 aa20.67■□□□□ 0.9
ARHGEF28-202ENST00000296799 CANXP27824 592 aaKnown RBP20.67■□□□□ 0.9
ARHGEF28-202ENST00000296799 FAM9BQ8IZU0 186 aa20.65■□□□□ 0.9
ARHGEF28-202ENST00000296799 HNRNPUQ00839 825 aaKnown RBP eCLIP20.64■□□□□ 0.9
ARHGEF28-202ENST00000296799 WIZO95785 1651 aa20.61■□□□□ 0.89
ARHGEF28-202ENST00000296799 PDS5BQ9NTI5 1447 aa20.61■□□□□ 0.89
ARHGEF28-202ENST00000296799 ZBTB47Q9UFB7 747 aaPredicted RBP20.6■□□□□ 0.89
ARHGEF28-202ENST00000296799 EIF4G2P78344 907 aaKnown RBP eCLIP20.6■□□□□ 0.89
ARHGEF28-202ENST00000296799 FHAD1B1AJZ9 1412 aa20.6■□□□□ 0.89
ARHGEF28-202ENST00000296799 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
ARHGEF28-202ENST00000296799 RGL3Q3MIN7 710 aa20.59■□□□□ 0.89
ARHGEF28-202ENST00000296799 TMC1Q8TDI8 760 aa20.58■□□□□ 0.89
ARHGEF28-202ENST00000296799 BCL11AQ9H165 835 aa20.56■□□□□ 0.88
ARHGEF28-202ENST00000296799 SALL2Q9Y467 1007 aaPredicted RBP20.56■□□□□ 0.88
ARHGEF28-202ENST00000296799 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
ARHGEF28-202ENST00000296799 CADPSQ9ULU8 1353 aa20.55■□□□□ 0.88
ARHGEF28-202ENST00000296799 ATAD2BQ9ULI0 1458 aa20.55■□□□□ 0.88
ARHGEF28-202ENST00000296799 MIER1Q8N108 512 aa20.52■□□□□ 0.88
ARHGEF28-202ENST00000296799 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
ARHGEF28-202ENST00000296799 MRS2Q9HD23 443 aa20.51■□□□□ 0.87
ARHGEF28-202ENST00000296799 CCNB3Q8WWL7 1395 aa20.51■□□□□ 0.87
ARHGEF28-202ENST00000296799 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
ARHGEF28-202ENST00000296799 RTL5Q5HYW3 569 aaPredicted RBP20.5■□□□□ 0.87
ARHGEF28-202ENST00000296799 SIN3AQ96ST3 1273 aa20.47■□□□□ 0.87
ARHGEF28-202ENST00000296799 VPS8Q8N3P4 1428 aa20.47■□□□□ 0.87
ARHGEF28-202ENST00000296799 FKBP8Q14318 412 aa20.47■□□□□ 0.87
ARHGEF28-202ENST00000296799 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.86
ARHGEF28-202ENST00000296799 SMARCA4P51532 1647 aa20.4■□□□□ 0.86
ARHGEF28-202ENST00000296799 PPP1R15AO75807 674 aaPredicted RBP20.4■□□□□ 0.86
ARHGEF28-202ENST00000296799 WDR43Q15061 677 aaKnown RBP eCLIP20.39■□□□□ 0.85
ARHGEF28-202ENST00000296799 ARID4BQ4LE39 1312 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF28-202ENST00000296799 CARD11Q9BXL7 1154 aa20.35■□□□□ 0.85
ARHGEF28-202ENST00000296799 CARMIL2Q6F5E8 1435 aa20.33■□□□□ 0.84
ARHGEF28-202ENST00000296799 FMN1Q68DA7 1419 aa20.29■□□□□ 0.84
ARHGEF28-202ENST00000296799 RAPGEF2Q9Y4G8 1499 aa20.26■□□□□ 0.83
ARHGEF28-202ENST00000296799 ARHGAP35Q9NRY4 1499 aa20.25■□□□□ 0.83
ARHGEF28-202ENST00000296799 CDCA8Q53HL2 280 aa20.24■□□□□ 0.83
ARHGEF28-202ENST00000296799 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
ARHGEF28-202ENST00000296799 SCAF1Q9H7N4 1312 aaKnown RBP20.22■□□□□ 0.83
ARHGEF28-202ENST00000296799 FANCD2Q9BXW9 1451 aa20.22■□□□□ 0.83
ARHGEF28-202ENST00000296799 SETD5Q9C0A6 1442 aa20.21■□□□□ 0.83
ARHGEF28-202ENST00000296799 CCDC136Q96JN2 1154 aa20.21■□□□□ 0.83
ARHGEF28-202ENST00000296799 JPH4Q96JJ6 628 aa20.21■□□□□ 0.83
ARHGEF28-202ENST00000296799 ANP32AP39687 249 aaKnown RBP20.2■□□□□ 0.82
ARHGEF28-202ENST00000296799 DCAF11Q8TEB1 546 aa20.2■□□□□ 0.82
ARHGEF28-202ENST00000296799 FHOD3Q2V2M9 1422 aa20.2■□□□□ 0.82
ARHGEF28-202ENST00000296799 NPM2Q86SE8 214 aaKnown RBP20.2■□□□□ 0.82
ARHGEF28-202ENST00000296799 KNSTRNQ9Y448 316 aa20.2■□□□□ 0.82
ARHGEF28-202ENST00000296799 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF28-202ENST00000296799 TIMELESSQ9UNS1 1208 aa20.19■□□□□ 0.82
ARHGEF28-202ENST00000296799 C14orf37Q86TY3 774 aa20.17■□□□□ 0.82
ARHGEF28-202ENST00000296799 PLEKHG5O94827 1062 aa20.17■□□□□ 0.82
ARHGEF28-202ENST00000296799 SENP3-EIF4A1A0A087X0R7 540 aa20.16■□□□□ 0.82
ARHGEF28-202ENST00000296799 IRX6P78412 446 aaPredicted RBP20.16■□□□□ 0.82
ARHGEF28-202ENST00000296799 PKD2Q13563 968 aa20.15■□□□□ 0.82
ARHGEF28-202ENST00000296799 EFCAB2Q5VUJ9 269 aa20.15■□□□□ 0.82
ARHGEF28-202ENST00000296799 FOXD1Q16676 465 aa20.14■□□□□ 0.82
ARHGEF28-202ENST00000296799 GGT6Q6P531 493 aa20.14■□□□□ 0.81
ARHGEF28-202ENST00000296799 MLECQ14165 292 aa20.13■□□□□ 0.81
ARHGEF28-202ENST00000296799 TRHP20396 242 aaPredicted RBP20.11■□□□□ 0.81
ARHGEF28-202ENST00000296799 POGKQ9P215 609 aa20.11■□□□□ 0.81
ARHGEF28-202ENST00000296799 RAB3GAP2Q9H2M9 1393 aa20.11■□□□□ 0.81
ARHGEF28-202ENST00000296799 KANK1Q14678 1352 aa20.1■□□□□ 0.81
ARHGEF28-202ENST00000296799 CFAP53Q96M91 514 aa20.08■□□□□ 0.81
ARHGEF28-202ENST00000296799 NCAPD3P42695 1498 aa20.08■□□□□ 0.8
ARHGEF28-202ENST00000296799 ZBTB7CA1YPR0 619 aa20.07■□□□□ 0.8
ARHGEF28-202ENST00000296799 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
ARHGEF28-202ENST00000296799 MPHOSPH9Q99550 1183 aa20.07■□□□□ 0.8
ARHGEF28-202ENST00000296799 NUP155O75694 1391 aa20.05■□□□□ 0.8
ARHGEF28-202ENST00000296799 IGF1RP08069 1367 aa20.03■□□□□ 0.8
ARHGEF28-202ENST00000296799 HNRNPMP52272 730 aaKnown RBP eCLIP20.03■□□□□ 0.84e-7■■■□□ 18.8
ARHGEF28-202ENST00000296799 UPF2Q9HAU5 1272 aaKnown RBP20.03■□□□□ 0.8
ARHGEF28-202ENST00000296799 ANKRD30AQ9BXX3 1397 aa20.02■□□□□ 0.8
ARHGEF28-202ENST00000296799 TMF1P82094 1093 aa20.01■□□□□ 0.79
ARHGEF28-202ENST00000296799 FGD5Q6ZNL6 1462 aa20■□□□□ 0.79
ARHGEF28-202ENST00000296799 TNNT2P45379 298 aaPredicted RBP19.99■□□□□ 0.79
ARHGEF28-202ENST00000296799 NEUROD2Q15784 382 aa19.99■□□□□ 0.79
ARHGEF28-202ENST00000296799 CC2D1BQ5T0F9 858 aaKnown RBP19.99■□□□□ 0.79
ARHGEF28-202ENST00000296799 HSPA5P11021 654 aaKnown RBP19.98■□□□□ 0.79
ARHGEF28-202ENST00000296799 KIF3BO15066 747 aa19.96■□□□□ 0.79
ARHGEF28-202ENST00000296799 RAD54L2Q9Y4B4 1467 aa19.96■□□□□ 0.79
ARHGEF28-202ENST00000296799 CCDC18Q5T9S5 1454 aa19.96■□□□□ 0.79
ARHGEF28-202ENST00000296799 HSP90AA1P07900 732 aaKnown RBP19.95■□□□□ 0.78
ARHGEF28-202ENST00000296799 RSPH4AQ5TD94 716 aa19.95■□□□□ 0.78
ARHGEF28-202ENST00000296799 A0A0G2JS52 829 aa19.95■□□□□ 0.78
ARHGEF28-202ENST00000296799 SUPT16HQ9Y5B9 1047 aaKnown RBP19.94■□□□□ 0.78
ARHGEF28-202ENST00000296799 GAPVD1Q14C86 1478 aa19.94■□□□□ 0.78
ARHGEF28-202ENST00000296799 SAFB2Q14151 953 aaKnown RBP eCLIP19.94■□□□□ 0.78
ARHGEF28-202ENST00000296799 NUDCQ9Y266 331 aa19.92■□□□□ 0.78
ARHGEF28-202ENST00000296799 SPAG9O60271 1321 aaKnown RBP19.92■□□□□ 0.78
ARHGEF28-202ENST00000296799 HDGFP51858 240 aaKnown RBP19.92■□□□□ 0.78
ARHGEF28-202ENST00000296799 LMOD2Q6P5Q4 547 aa19.91■□□□□ 0.78
ARHGEF28-202ENST00000296799 PTPRGP23470 1445 aa19.91■□□□□ 0.78
ARHGEF28-202ENST00000296799 L3MBTL2Q969R5 705 aa19.9■□□□□ 0.78
ARHGEF28-202ENST00000296799 SRPK2P78362 688 aaKnown RBP19.89■□□□□ 0.78
ARHGEF28-202ENST00000296799 HAP1P54257 671 aaPredicted RBP19.89■□□□□ 0.77
ARHGEF28-202ENST00000296799 MAPK8IP3Q9UPT6 1336 aa19.88■□□□□ 0.77
ARHGEF28-202ENST00000296799 MYH16Q9H6N6 1097 aa19.87■□□□□ 0.77
ARHGEF28-202ENST00000296799 STK26Q9P289 416 aa19.87■□□□□ 0.77
ARHGEF28-202ENST00000296799 U2SURPO15042 1029 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms