RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 CECR2Q9BXF3 1484 aa23.27■■□□□ 1.32
CDCP1-201ENST00000296129 KCNH8Q96L42 1107 aa23.27■■□□□ 1.31
CDCP1-201ENST00000296129 MIER1Q8N108 512 aa23.24■■□□□ 1.31
CDCP1-201ENST00000296129 MRS2Q9HD23 443 aa23.24■■□□□ 1.31
CDCP1-201ENST00000296129 PLEKHD1A6NEE1 506 aa23.23■■□□□ 1.31
CDCP1-201ENST00000296129 WDR43Q15061 677 aaKnown RBP eCLIP23.21■■□□□ 1.31
CDCP1-201ENST00000296129 EIF4G2P78344 907 aaKnown RBP eCLIP23.19■■□□□ 1.3
CDCP1-201ENST00000296129 SENP3Q9H4L4 574 aaPredicted RBP23.12■■□□□ 1.29
CDCP1-201ENST00000296129 CFDP1Q9UEE9 299 aaPredicted RBP23.11■■□□□ 1.29
CDCP1-201ENST00000296129 CCDC136Q96JN2 1154 aa23.1■■□□□ 1.29
CDCP1-201ENST00000296129 ERCC6Q03468 1493 aa23.09■■□□□ 1.29
CDCP1-201ENST00000296129 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.07■■□□□ 1.28
CDCP1-201ENST00000296129 RGL3Q3MIN7 710 aa23.06■■□□□ 1.28
CDCP1-201ENST00000296129 IRX6P78412 446 aaPredicted RBP23.05■■□□□ 1.28
CDCP1-201ENST00000296129 SOGA1O94964 1423 aa23.04■■□□□ 1.28
CDCP1-201ENST00000296129 UPF2Q9HAU5 1272 aaKnown RBP23.04■■□□□ 1.28
CDCP1-201ENST00000296129 HSP90AA1P07900 732 aaKnown RBP23.01■■□□□ 1.27
CDCP1-201ENST00000296129 MROH2BQ7Z745 1585 aa23■■□□□ 1.27
CDCP1-201ENST00000296129 CUX2O14529 1486 aa22.99■■□□□ 1.27
CDCP1-201ENST00000296129 EIF4G1Q04637 1599 aaKnown RBP22.98■■□□□ 1.27
CDCP1-201ENST00000296129 PPP1R15AO75807 674 aaPredicted RBP22.97■■□□□ 1.27
CDCP1-201ENST00000296129 CCDC88BA6NC98 1476 aa22.96■■□□□ 1.27
CDCP1-201ENST00000296129 CARMIL1Q5VZK9 1371 aa22.95■■□□□ 1.26
CDCP1-201ENST00000296129 SCAF1Q9H7N4 1312 aaKnown RBP22.94■■□□□ 1.26
CDCP1-201ENST00000296129 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
CDCP1-201ENST00000296129 SIN3AQ96ST3 1273 aa22.93■■□□□ 1.26
CDCP1-201ENST00000296129 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
CDCP1-201ENST00000296129 CARD11Q9BXL7 1154 aa22.9■■□□□ 1.26
CDCP1-201ENST00000296129 CCNB3Q8WWL7 1395 aa22.88■■□□□ 1.25
CDCP1-201ENST00000296129 SENP3-EIF4A1A0A087X0R7 540 aa22.86■■□□□ 1.25
CDCP1-201ENST00000296129 ZBTB7CA1YPR0 619 aa22.86■■□□□ 1.25
CDCP1-201ENST00000296129 PLEKHG5O94827 1062 aa22.84■■□□□ 1.25
CDCP1-201ENST00000296129 C14orf37Q86TY3 774 aa22.83■■□□□ 1.25
CDCP1-201ENST00000296129 SMARCA2P51531 1590 aa22.81■■□□□ 1.24
CDCP1-201ENST00000296129 ARID4BQ4LE39 1312 aaPredicted RBP22.81■■□□□ 1.24
CDCP1-201ENST00000296129 KNSTRNQ9Y448 316 aa22.81■■□□□ 1.24
CDCP1-201ENST00000296129 CDCA8Q53HL2 280 aa22.8■■□□□ 1.24
CDCP1-201ENST00000296129 ANP32BQ92688 251 aaKnown RBP22.79■■□□□ 1.24
CDCP1-201ENST00000296129 MYH16Q9H6N6 1097 aa22.77■■□□□ 1.24
CDCP1-201ENST00000296129 NBR1Q14596 966 aa22.76■■□□□ 1.23
CDCP1-201ENST00000296129 WIZO95785 1651 aa22.75■■□□□ 1.23
CDCP1-201ENST00000296129 CFAP53Q96M91 514 aa22.75■■□□□ 1.23
CDCP1-201ENST00000296129 VPS8Q8N3P4 1428 aa22.74■■□□□ 1.23
CDCP1-201ENST00000296129 ARHGAP35Q9NRY4 1499 aa22.71■■□□□ 1.23
CDCP1-201ENST00000296129 TOP2AP11388 1531 aaKnown RBP22.71■■□□□ 1.23
CDCP1-201ENST00000296129 PPM1GO15355 546 aaPredicted RBP22.69■■□□□ 1.22
CDCP1-201ENST00000296129 A0A0G2JS52 829 aa22.68■■□□□ 1.22
CDCP1-201ENST00000296129 KANK4Q5T7N3 995 aaPredicted RBP22.67■■□□□ 1.22
CDCP1-201ENST00000296129 SUPT16HQ9Y5B9 1047 aaKnown RBP22.67■■□□□ 1.22
CDCP1-201ENST00000296129 SETD5Q9C0A6 1442 aa22.66■■□□□ 1.22
CDCP1-201ENST00000296129 DCAF11Q8TEB1 546 aa22.64■■□□□ 1.21
CDCP1-201ENST00000296129 CC2D1BQ5T0F9 858 aaKnown RBP22.63■■□□□ 1.21
CDCP1-201ENST00000296129 POGKQ9P215 609 aa22.63■■□□□ 1.21
CDCP1-201ENST00000296129 PDS5BQ9NTI5 1447 aa22.63■■□□□ 1.21
CDCP1-201ENST00000296129 NEUROD2Q15784 382 aa22.61■■□□□ 1.21
CDCP1-201ENST00000296129 ARXQ96QS3 562 aa22.61■■□□□ 1.21
CDCP1-201ENST00000296129 TDRD9Q8NDG6 1382 aaKnown RBP22.6■■□□□ 1.21
CDCP1-201ENST00000296129 KANK1Q14678 1352 aa22.59■■□□□ 1.21
CDCP1-201ENST00000296129 TNNT2P45379 298 aaPredicted RBP22.59■■□□□ 1.21
CDCP1-201ENST00000296129 MAPK8IP3Q9UPT6 1336 aa22.56■■□□□ 1.2
CDCP1-201ENST00000296129 LAS1LQ9Y4W2 734 aaKnown RBP22.54■■□□□ 1.2
CDCP1-201ENST00000296129 CARMIL2Q6F5E8 1435 aa22.54■■□□□ 1.2
CDCP1-201ENST00000296129 TMF1P82094 1093 aa22.54■■□□□ 1.2
CDCP1-201ENST00000296129 FTSJ3Q8IY81 847 aaKnown RBP22.53■■□□□ 1.2
CDCP1-201ENST00000296129 FOXD1Q16676 465 aa22.52■■□□□ 1.2
CDCP1-201ENST00000296129 TIMELESSQ9UNS1 1208 aa22.52■■□□□ 1.2
CDCP1-201ENST00000296129 NUDCQ9Y266 331 aa22.52■■□□□ 1.2
CDCP1-201ENST00000296129 DDRGK1Q96HY6 314 aa22.52■■□□□ 1.2
CDCP1-201ENST00000296129 FMN1Q68DA7 1419 aa22.51■■□□□ 1.19
CDCP1-201ENST00000296129 HAP1P54257 671 aaPredicted RBP22.51■■□□□ 1.19
CDCP1-201ENST00000296129 PKD2Q13563 968 aa22.49■■□□□ 1.19
CDCP1-201ENST00000296129 HSPA5P11021 654 aaKnown RBP22.49■■□□□ 1.19
CDCP1-201ENST00000296129 BECN1Q14457 450 aa22.49■■□□□ 1.19
CDCP1-201ENST00000296129 RAB3GAP2Q9H2M9 1393 aa22.47■■□□□ 1.19
CDCP1-201ENST00000296129 EIF5BO60841 1220 aaKnown RBP22.46■■□□□ 1.19
CDCP1-201ENST00000296129 MLECQ14165 292 aa22.46■■□□□ 1.19
CDCP1-201ENST00000296129 U2SURPO15042 1029 aaKnown RBP22.45■■□□□ 1.18
CDCP1-201ENST00000296129 FRAT1Q92837 279 aaPredicted RBP22.44■■□□□ 1.18
CDCP1-201ENST00000296129 CADPSQ9ULU8 1353 aa22.44■■□□□ 1.18
CDCP1-201ENST00000296129 RAPGEF2Q9Y4G8 1499 aa22.44■■□□□ 1.18
CDCP1-201ENST00000296129 PPP4R2Q9NY27 417 aa22.43■■□□□ 1.18
CDCP1-201ENST00000296129 SMARCA4P51532 1647 aa22.43■■□□□ 1.18
CDCP1-201ENST00000296129 LMOD2Q6P5Q4 547 aa22.43■■□□□ 1.18
CDCP1-201ENST00000296129 FHOD3Q2V2M9 1422 aa22.42■■□□□ 1.18
CDCP1-201ENST00000296129 ATAD2BQ9ULI0 1458 aa22.4■■□□□ 1.18
CDCP1-201ENST00000296129 GGT6Q6P531 493 aa22.4■■□□□ 1.18
CDCP1-201ENST00000296129 MPHOSPH9Q99550 1183 aa22.4■■□□□ 1.18
CDCP1-201ENST00000296129 SAFB2Q14151 953 aaKnown RBP eCLIP22.39■■□□□ 1.17
CDCP1-201ENST00000296129 SRPK2P78362 688 aaKnown RBP22.38■■□□□ 1.17
CDCP1-201ENST00000296129 CCER2I3L3R5 266 aa22.36■■□□□ 1.17
CDCP1-201ENST00000296129 RGS3P49796 1198 aa22.35■■□□□ 1.17
CDCP1-201ENST00000296129 NUP155O75694 1391 aa22.35■■□□□ 1.17
CDCP1-201ENST00000296129 ANKRD30AQ9BXX3 1397 aa22.35■■□□□ 1.17
CDCP1-201ENST00000296129 CASC1Q6TDU7 716 aa22.34■■□□□ 1.17
CDCP1-201ENST00000296129 MORC1Q86VD1 984 aa22.33■■□□□ 1.17
CDCP1-201ENST00000296129 ROCK2O75116 1388 aaKnown RBP22.32■■□□□ 1.16
CDCP1-201ENST00000296129 PNNQ9H307 717 aaKnown RBP22.32■■□□□ 1.16
CDCP1-201ENST00000296129 TRHP20396 242 aaPredicted RBP22.31■■□□□ 1.16
CDCP1-201ENST00000296129 B4GALNT3Q6L9W6 998 aa22.31■■□□□ 1.16
CDCP1-201ENST00000296129 HDGFP51858 240 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms