RNA–Protein interactions for RNA: ENST00000292579.11

ZNF250-201, Transcript of zinc finger protein 250, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF250, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-201ENST00000292579 WRNQ14191 1432 aaPredicted RBP eCLIP12.75□□□□□ -0.37
ZNF250-201ENST00000292579 CLIP1P30622 1438 aa12.74□□□□□ -0.37
ZNF250-201ENST00000292579 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
ZNF250-201ENST00000292579 HIRIP3Q9BW71 556 aaPredicted RBP12.72□□□□□ -0.37
ZNF250-201ENST00000292579 KIF27Q86VH2 1401 aa12.72□□□□□ -0.37
ZNF250-201ENST00000292579 PPM1GO15355 546 aaPredicted RBP12.7□□□□□ -0.38
ZNF250-201ENST00000292579 DDX10Q13206 875 aaKnown RBP12.68□□□□□ -0.38
ZNF250-201ENST00000292579 WDR43Q15061 677 aaKnown RBP eCLIP12.67□□□□□ -0.38
ZNF250-201ENST00000292579 POGKQ9P215 609 aa12.66□□□□□ -0.38
ZNF250-201ENST00000292579 GGT6Q6P531 493 aa12.64□□□□□ -0.39
ZNF250-201ENST00000292579 BAZ1AQ9NRL2 1556 aaPredicted RBP12.64□□□□□ -0.39
ZNF250-201ENST00000292579 CUX2O14529 1486 aa12.64□□□□□ -0.39
ZNF250-201ENST00000292579 PDS5BQ9NTI5 1447 aa12.63□□□□□ -0.39
ZNF250-201ENST00000292579 RTL5Q5HYW3 569 aaPredicted RBP12.62□□□□□ -0.39
ZNF250-201ENST00000292579 AEBP2Q6ZN18 517 aaPredicted RBP12.62□□□□□ -0.39
ZNF250-201ENST00000292579 GOLGA3Q08378 1498 aa12.62□□□□□ -0.39
ZNF250-201ENST00000292579 DCAF1Q9Y4B6 1507 aa12.62□□□□□ -0.39
ZNF250-201ENST00000292579 SOX12O15370 315 aa12.61□□□□□ -0.39
ZNF250-201ENST00000292579 NPHP1O15259 732 aa12.6□□□□□ -0.39
ZNF250-201ENST00000292579 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
ZNF250-201ENST00000292579 SENP3-EIF4A1A0A087X0R7 540 aa12.59□□□□□ -0.39
ZNF250-201ENST00000292579 CYB5RLQ6IPT4 315 aa12.59□□□□□ -0.39
ZNF250-201ENST00000292579 HNRNPUQ00839 825 aaKnown RBP eCLIP12.58□□□□□ -0.4
ZNF250-201ENST00000292579 SAFB2Q14151 953 aaKnown RBP eCLIP12.58□□□□□ -0.4
ZNF250-201ENST00000292579 CCNB3Q8WWL7 1395 aa12.58□□□□□ -0.4
ZNF250-201ENST00000292579 CARMIL1Q5VZK9 1371 aa12.57□□□□□ -0.4
ZNF250-201ENST00000292579 TNNT2P45379 298 aaPredicted RBP12.56□□□□□ -0.4
ZNF250-201ENST00000292579 SOGA1O94964 1423 aa12.55□□□□□ -0.4
ZNF250-201ENST00000292579 CEP162Q5TB80 1403 aa12.54□□□□□ -0.4
ZNF250-201ENST00000292579 KANK1Q14678 1352 aa12.53□□□□□ -0.4
ZNF250-201ENST00000292579 STK26Q9P289 416 aa12.52□□□□□ -0.4
ZNF250-201ENST00000292579 LAS1LQ9Y4W2 734 aaKnown RBP12.52□□□□□ -0.41
ZNF250-201ENST00000292579 CARD11Q9BXL7 1154 aa12.51□□□□□ -0.41
ZNF250-201ENST00000292579 MRS2Q9HD23 443 aa12.51□□□□□ -0.41
ZNF250-201ENST00000292579 HDGFP51858 240 aaKnown RBP12.51□□□□□ -0.41
ZNF250-201ENST00000292579 CARMIL2Q6F5E8 1435 aa12.51□□□□□ -0.41
ZNF250-201ENST00000292579 EIF4G2P78344 907 aaKnown RBP eCLIP12.5□□□□□ -0.41
ZNF250-201ENST00000292579 SMARCA2P51531 1590 aa12.5□□□□□ -0.41
ZNF250-201ENST00000292579 HSP90AA1P07900 732 aaKnown RBP12.49□□□□□ -0.41
ZNF250-201ENST00000292579 CCDC9Q9Y3X0 531 aaKnown RBP12.49□□□□□ -0.41
ZNF250-201ENST00000292579 CEP164Q9UPV0 1460 aa12.49□□□□□ -0.41
ZNF250-201ENST00000292579 PAK3O75914 559 aaPredicted RBP12.49□□□□□ -0.41
ZNF250-201ENST00000292579 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
ZNF250-201ENST00000292579 EEA1Q15075 1411 aa12.48□□□□□ -0.41
ZNF250-201ENST00000292579 NEUROD2Q15784 382 aa12.48□□□□□ -0.41
ZNF250-201ENST00000292579 KNSTRNQ9Y448 316 aa12.47□□□□□ -0.41
ZNF250-201ENST00000292579 CCDC88BA6NC98 1476 aa12.46□□□□□ -0.41
ZNF250-201ENST00000292579 SRPK2P78362 688 aaKnown RBP12.46□□□□□ -0.41
ZNF250-201ENST00000292579 MROH2BQ7Z745 1585 aa12.46□□□□□ -0.41
ZNF250-201ENST00000292579 NUTM2DQ5VT03 806 aaPredicted RBP12.46□□□□□ -0.41
ZNF250-201ENST00000292579 CFAP53Q96M91 514 aa12.46□□□□□ -0.42
ZNF250-201ENST00000292579 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
ZNF250-201ENST00000292579 MYH16Q9H6N6 1097 aa12.44□□□□□ -0.42
ZNF250-201ENST00000292579 DCAF11Q8TEB1 546 aa12.44□□□□□ -0.42
ZNF250-201ENST00000292579 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
ZNF250-201ENST00000292579 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.42□□□□□ -0.42
ZNF250-201ENST00000292579 CDCA8Q53HL2 280 aa12.42□□□□□ -0.42
ZNF250-201ENST00000292579 FKBP8Q14318 412 aa12.41□□□□□ -0.42
ZNF250-201ENST00000292579 CC2D1BQ5T0F9 858 aaKnown RBP12.41□□□□□ -0.42
ZNF250-201ENST00000292579 U2SURPO15042 1029 aaKnown RBP12.41□□□□□ -0.42
ZNF250-201ENST00000292579 SIN3AQ96ST3 1273 aa12.4□□□□□ -0.42
ZNF250-201ENST00000292579 EFCAB2Q5VUJ9 269 aa12.4□□□□□ -0.42
ZNF250-201ENST00000292579 CSB-PGBD3P0DP91 1061 aa12.4□□□□□ -0.42
ZNF250-201ENST00000292579 HNRNPMP52272 730 aaKnown RBP eCLIP12.4□□□□□ -0.42
ZNF250-201ENST00000292579 KIF3BO15066 747 aa12.39□□□□□ -0.43
ZNF250-201ENST00000292579 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
ZNF250-201ENST00000292579 MAPK8IP3Q9UPT6 1336 aa12.39□□□□□ -0.43
ZNF250-201ENST00000292579 FOXD1Q16676 465 aa12.38□□□□□ -0.43
ZNF250-201ENST00000292579 UPF2Q9HAU5 1272 aaKnown RBP12.38□□□□□ -0.43
ZNF250-201ENST00000292579 IRX6P78412 446 aaPredicted RBP12.38□□□□□ -0.43
ZNF250-201ENST00000292579 JPH4Q96JJ6 628 aa12.38□□□□□ -0.43
ZNF250-201ENST00000292579 FHAD1B1AJZ9 1412 aa12.37□□□□□ -0.43
ZNF250-201ENST00000292579 WIZO95785 1651 aa12.37□□□□□ -0.43
ZNF250-201ENST00000292579 TNIKQ9UKE5 1360 aa12.37□□□□□ -0.43
ZNF250-201ENST00000292579 TULP1O00294 542 aaPredicted RBP12.37□□□□□ -0.43
ZNF250-201ENST00000292579 NUTM2FA1L443 756 aa12.36□□□□□ -0.43
ZNF250-201ENST00000292579 EID1Q9Y6B2 187 aa12.36□□□□□ -0.43
ZNF250-201ENST00000292579 ANP32AP39687 249 aaKnown RBP12.35□□□□□ -0.43
ZNF250-201ENST00000292579 MYO15BQ96JP2 1530 aa12.35□□□□□ -0.43
ZNF250-201ENST00000292579 TAOK2Q9UL54 1235 aa12.35□□□□□ -0.43
ZNF250-201ENST00000292579 ZNF330Q9Y3S2 320 aaPredicted RBP12.35□□□□□ -0.43
ZNF250-201ENST00000292579 NUDCQ9Y266 331 aa12.34□□□□□ -0.43
ZNF250-201ENST00000292579 WASHC2CQ9Y4E1 1318 aa12.34□□□□□ -0.43
ZNF250-201ENST00000292579 FAM69CQ0P6D2 419 aa12.33□□□□□ -0.44
ZNF250-201ENST00000292579 CCDC136Q96JN2 1154 aa12.32□□□□□ -0.44
ZNF250-201ENST00000292579 PKD2Q13563 968 aa12.32□□□□□ -0.44
ZNF250-201ENST00000292579 FANCD2Q9BXW9 1451 aa12.3□□□□□ -0.44
ZNF250-201ENST00000292579 SPAG9O60271 1321 aaKnown RBP12.3□□□□□ -0.44
ZNF250-201ENST00000292579 TMF1P82094 1093 aa12.29□□□□□ -0.44
ZNF250-201ENST00000292579 GOLGA2Q08379 1002 aa12.29□□□□□ -0.44
ZNF250-201ENST00000292579 ACIN1Q9UKV3 1341 aaKnown RBP12.28□□□□□ -0.44
ZNF250-201ENST00000292579 FTSJ3Q8IY81 847 aaKnown RBP12.28□□□□□ -0.44
ZNF250-201ENST00000292579 ARHGAP35Q9NRY4 1499 aa12.28□□□□□ -0.44
ZNF250-201ENST00000292579 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.45
ZNF250-201ENST00000292579 OS9Q13438 667 aaPredicted RBP12.27□□□□□ -0.45
ZNF250-201ENST00000292579 MEX3CQ5U5Q3 659 aaKnown RBP12.27□□□□□ -0.45
ZNF250-201ENST00000292579 HDGFL2Q7Z4V5 671 aaPredicted RBP12.26□□□□□ -0.45
ZNF250-201ENST00000292579 MORC1Q86VD1 984 aa12.26□□□□□ -0.45
ZNF250-201ENST00000292579 KANK4Q5T7N3 995 aaPredicted RBP12.26□□□□□ -0.45
ZNF250-201ENST00000292579 FHOD3Q2V2M9 1422 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms