RNA–Protein interactions for RNA: ENST00000285238.12

ABCC3-201, Transcript of ATP binding cassette subfamily C member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCC3, Length 5,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-201ENST00000285238 GOLGA3Q08378 1498 aa16.87■□□□□ 0.29
ABCC3-201ENST00000285238 EEA1Q15075 1411 aa16.85■□□□□ 0.29
ABCC3-201ENST00000285238 ANP32BQ92688 251 aaKnown RBP16.83■□□□□ 0.28
ABCC3-201ENST00000285238 NBR1Q14596 966 aa16.82■□□□□ 0.28
ABCC3-201ENST00000285238 WRNQ14191 1432 aaPredicted RBP eCLIP16.8■□□□□ 0.28
ABCC3-201ENST00000285238 EIF5BO60841 1220 aaKnown RBP16.77■□□□□ 0.28
ABCC3-201ENST00000285238 RB1CC1Q8TDY2 1594 aa16.76■□□□□ 0.27
ABCC3-201ENST00000285238 KCNH8Q96L42 1107 aa16.75■□□□□ 0.27
ABCC3-201ENST00000285238 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
ABCC3-201ENST00000285238 PLEKHD1A6NEE1 506 aa16.74■□□□□ 0.27
ABCC3-201ENST00000285238 RGL3Q3MIN7 710 aa16.74■□□□□ 0.27
ABCC3-201ENST00000285238 TNIKQ9UKE5 1360 aa16.74■□□□□ 0.27
ABCC3-201ENST00000285238 SENP3-EIF4A1A0A087X0R7 540 aa16.71■□□□□ 0.27
ABCC3-201ENST00000285238 ARXQ96QS3 562 aa16.7■□□□□ 0.26
ABCC3-201ENST00000285238 KIF27Q86VH2 1401 aa16.69■□□□□ 0.26
ABCC3-201ENST00000285238 BAZ1BQ9UIG0 1483 aaKnown RBP16.68■□□□□ 0.26
ABCC3-201ENST00000285238 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
ABCC3-201ENST00000285238 CFDP1Q9UEE9 299 aaPredicted RBP16.67■□□□□ 0.26
ABCC3-201ENST00000285238 SIN3AQ96ST3 1273 aa16.65■□□□□ 0.26
ABCC3-201ENST00000285238 MYH16Q9H6N6 1097 aa16.63■□□□□ 0.25
ABCC3-201ENST00000285238 SUPT16HQ9Y5B9 1047 aaKnown RBP16.62■□□□□ 0.25
ABCC3-201ENST00000285238 CARD11Q9BXL7 1154 aa16.62■□□□□ 0.25
ABCC3-201ENST00000285238 PPP1R15AO75807 674 aaPredicted RBP16.61■□□□□ 0.25
ABCC3-201ENST00000285238 NACADO15069 1562 aa16.6■□□□□ 0.25
ABCC3-201ENST00000285238 KNSTRNQ9Y448 316 aa16.59■□□□□ 0.25
ABCC3-201ENST00000285238 PLEKHG5O94827 1062 aa16.58■□□□□ 0.24
ABCC3-201ENST00000285238 ZBTB7CA1YPR0 619 aa16.56■□□□□ 0.24
ABCC3-201ENST00000285238 CDCA8Q53HL2 280 aa16.56■□□□□ 0.24
ABCC3-201ENST00000285238 C14orf37Q86TY3 774 aa16.55■□□□□ 0.24
ABCC3-201ENST00000285238 CFAP53Q96M91 514 aa16.55■□□□□ 0.24
ABCC3-201ENST00000285238 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
ABCC3-201ENST00000285238 BECN1Q14457 450 aa16.52■□□□□ 0.24
ABCC3-201ENST00000285238 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.24
ABCC3-201ENST00000285238 CCNB3Q8WWL7 1395 aa16.51■□□□□ 0.23
ABCC3-201ENST00000285238 PPM1GO15355 546 aaPredicted RBP16.5■□□□□ 0.23
ABCC3-201ENST00000285238 NEUROD2Q15784 382 aa16.5■□□□□ 0.23
ABCC3-201ENST00000285238 BAZ1AQ9NRL2 1556 aaPredicted RBP16.5■□□□□ 0.23
ABCC3-201ENST00000285238 SOGA1O94964 1423 aa16.49■□□□□ 0.23
ABCC3-201ENST00000285238 A0A0G2JS52 829 aa16.49■□□□□ 0.23
ABCC3-201ENST00000285238 PPP4R2Q9NY27 417 aa16.45■□□□□ 0.22
ABCC3-201ENST00000285238 FTSJ3Q8IY81 847 aaKnown RBP16.44■□□□□ 0.22
ABCC3-201ENST00000285238 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
ABCC3-201ENST00000285238 CC2D1BQ5T0F9 858 aaKnown RBP16.44■□□□□ 0.22
ABCC3-201ENST00000285238 CARMIL1Q5VZK9 1371 aa16.44■□□□□ 0.22
ABCC3-201ENST00000285238 TNNT2P45379 298 aaPredicted RBP16.42■□□□□ 0.22
ABCC3-201ENST00000285238 CUX2O14529 1486 aa16.41■□□□□ 0.22
ABCC3-201ENST00000285238 LAS1LQ9Y4W2 734 aaKnown RBP16.41■□□□□ 0.22
ABCC3-201ENST00000285238 ARID4BQ4LE39 1312 aaPredicted RBP16.41■□□□□ 0.22
ABCC3-201ENST00000285238 MAPK8IP3Q9UPT6 1336 aa16.41■□□□□ 0.22
ABCC3-201ENST00000285238 RGS3P49796 1198 aa16.4■□□□□ 0.22
ABCC3-201ENST00000285238 GLIPR1L2Q4G1C9 344 aa16.4■□□□□ 0.22
ABCC3-201ENST00000285238 DCAF11Q8TEB1 546 aa16.4■□□□□ 0.22
ABCC3-201ENST00000285238 ANP32EQ9BTT0 268 aa16.39■□□□□ 0.21
ABCC3-201ENST00000285238 FRAT1Q92837 279 aaPredicted RBP16.39■□□□□ 0.21
ABCC3-201ENST00000285238 POGKQ9P215 609 aa16.39■□□□□ 0.21
ABCC3-201ENST00000285238 NUDCQ9Y266 331 aa16.39■□□□□ 0.21
ABCC3-201ENST00000285238 GOLGA6L22H0YM25 854 aa16.38■□□□□ 0.21
ABCC3-201ENST00000285238 NCLP19338 710 aaKnown RBP16.38■□□□□ 0.21
ABCC3-201ENST00000285238 B4GALNT3Q6L9W6 998 aa16.38■□□□□ 0.21
ABCC3-201ENST00000285238 TIMELESSQ9UNS1 1208 aa16.36■□□□□ 0.21
ABCC3-201ENST00000285238 TRIM44Q96DX7 344 aaPredicted RBP16.36■□□□□ 0.21
ABCC3-201ENST00000285238 EIF4G1Q04637 1599 aaKnown RBP16.36■□□□□ 0.21
ABCC3-201ENST00000285238 KANK4Q5T7N3 995 aaPredicted RBP16.35■□□□□ 0.21
ABCC3-201ENST00000285238 VPS8Q8N3P4 1428 aa16.35■□□□□ 0.21
ABCC3-201ENST00000285238 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
ABCC3-201ENST00000285238 TMF1P82094 1093 aa16.34■□□□□ 0.21
ABCC3-201ENST00000285238 SETD5Q9C0A6 1442 aa16.34■□□□□ 0.21
ABCC3-201ENST00000285238 U2SURPO15042 1029 aaKnown RBP16.33■□□□□ 0.2
ABCC3-201ENST00000285238 CASC1Q6TDU7 716 aa16.32■□□□□ 0.2
ABCC3-201ENST00000285238 HSPA5P11021 654 aaKnown RBP16.32■□□□□ 0.2
ABCC3-201ENST00000285238 CCER2I3L3R5 266 aa16.3■□□□□ 0.2
ABCC3-201ENST00000285238 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
ABCC3-201ENST00000285238 HAP1P54257 671 aaPredicted RBP16.3■□□□□ 0.2
ABCC3-201ENST00000285238 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
ABCC3-201ENST00000285238 FOXD1Q16676 465 aa16.29■□□□□ 0.2
ABCC3-201ENST00000285238 NOP58Q9Y2X3 529 aaKnown RBP16.28■□□□□ 0.2
ABCC3-201ENST00000285238 MROH2BQ7Z745 1585 aa16.28■□□□□ 0.2
ABCC3-201ENST00000285238 ARHGAP35Q9NRY4 1499 aa16.28■□□□□ 0.2
ABCC3-201ENST00000285238 TPRNQ4KMQ1 711 aa16.27■□□□□ 0.2
ABCC3-201ENST00000285238 LMOD2Q6P5Q4 547 aa16.27■□□□□ 0.19
ABCC3-201ENST00000285238 PKD2Q13563 968 aa16.26■□□□□ 0.19
ABCC3-201ENST00000285238 KANK1Q14678 1352 aa16.24■□□□□ 0.19
ABCC3-201ENST00000285238 MS4A1P11836 297 aa16.24■□□□□ 0.19
ABCC3-201ENST00000285238 PTMAP06454 111 aaKnown RBP16.23■□□□□ 0.19
ABCC3-201ENST00000285238 RAB3GAP2Q9H2M9 1393 aa16.22■□□□□ 0.19
ABCC3-201ENST00000285238 CHMP4BQ9H444 224 aaKnown RBP16.22■□□□□ 0.19
ABCC3-201ENST00000285238 SRPK2P78362 688 aaKnown RBP16.21■□□□□ 0.19
ABCC3-201ENST00000285238 SAFB2Q14151 953 aaKnown RBP eCLIP16.21■□□□□ 0.19
ABCC3-201ENST00000285238 MORC1Q86VD1 984 aa16.21■□□□□ 0.19
ABCC3-201ENST00000285238 PNNQ9H307 717 aaKnown RBP16.2■□□□□ 0.18
ABCC3-201ENST00000285238 ZRSR1Q15695 479 aaKnown RBP16.19■□□□□ 0.18
ABCC3-201ENST00000285238 CDK11BP21127 795 aaKnown RBP16.19■□□□□ 0.18
ABCC3-201ENST00000285238 HSP90AB1P08238 724 aaKnown RBP16.19■□□□□ 0.18
ABCC3-201ENST00000285238 MPHOSPH9Q99550 1183 aa16.18■□□□□ 0.18
ABCC3-201ENST00000285238 SOX12O15370 315 aa16.18■□□□□ 0.18
ABCC3-201ENST00000285238 MLECQ14165 292 aa16.17■□□□□ 0.18
ABCC3-201ENST00000285238 OS9Q13438 667 aaPredicted RBP16.17■□□□□ 0.18
ABCC3-201ENST00000285238 KTN1Q86UP2 1357 aaKnown RBP16.16■□□□□ 0.18
ABCC3-201ENST00000285238 GGT6Q6P531 493 aa16.16■□□□□ 0.18
ABCC3-201ENST00000285238 ERICH6BQ5W0A0 696 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms