RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 AMER1Q5JTC6 1135 aaPredicted RBP20.89■□□□□ 0.94
MSI2-201ENST00000284073 ARID4BQ4LE39 1312 aaPredicted RBP20.89■□□□□ 0.93
MSI2-201ENST00000284073 PPP4R2Q9NY27 417 aa20.88■□□□□ 0.93
MSI2-201ENST00000284073 GOLGA6L22H0YM25 854 aa20.88■□□□□ 0.93
MSI2-201ENST00000284073 B4GALNT3Q6L9W6 998 aa20.87■□□□□ 0.93
MSI2-201ENST00000284073 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
MSI2-201ENST00000284073 TPRNQ4KMQ1 711 aa20.85■□□□□ 0.93
MSI2-201ENST00000284073 CHIC2Q9UKJ5 165 aa20.85■□□□□ 0.93
MSI2-201ENST00000284073 CDK11BP21127 795 aaKnown RBP20.83■□□□□ 0.93
MSI2-201ENST00000284073 KDM2AQ9Y2K7 1162 aa20.79■□□□□ 0.92
MSI2-201ENST00000284073 PABPN1Q86U42 306 aaKnown RBP eCLIP20.79■□□□□ 0.921e-5■□□□□ 8.6
MSI2-201ENST00000284073 EIF4G2P78344 907 aaKnown RBP eCLIP20.77■□□□□ 0.921e-6■■■■■ 30.9
MSI2-201ENST00000284073 FBLN2P98095 1184 aa20.77■□□□□ 0.92
MSI2-201ENST00000284073 RGS3P49796 1198 aa20.77■□□□□ 0.91
MSI2-201ENST00000284073 TSHZ2Q9NRE2 1034 aa20.74■□□□□ 0.91
MSI2-201ENST00000284073 CHGAP10645 457 aaKnown RBP20.73■□□□□ 0.91
MSI2-201ENST00000284073 MYH16Q9H6N6 1097 aa20.72■□□□□ 0.91
MSI2-201ENST00000284073 PLCB2Q00722 1185 aa20.7■□□□□ 0.9
MSI2-201ENST00000284073 ARID3AQ99856 593 aa20.67■□□□□ 0.9
MSI2-201ENST00000284073 CCDC180Q9P1Z9 1646 aa20.67■□□□□ 0.9
MSI2-201ENST00000284073 L1TD1Q5T7N2 865 aaKnown RBP20.6■□□□□ 0.89
MSI2-201ENST00000284073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.6■□□□□ 0.896e-8■□□□□ 10.2
MSI2-201ENST00000284073 SPRYD3Q8NCJ5 442 aa20.6■□□□□ 0.89
MSI2-201ENST00000284073 MSNP26038 577 aaKnown RBP20.58■□□□□ 0.89
MSI2-201ENST00000284073 ZBTB7CA1YPR0 619 aa20.58■□□□□ 0.88
MSI2-201ENST00000284073 HSP90AB1P08238 724 aaKnown RBP20.55■□□□□ 0.88
MSI2-201ENST00000284073 PNNQ9H307 717 aaKnown RBP20.53■□□□□ 0.88
MSI2-201ENST00000284073 ZRSR1Q15695 479 aaKnown RBP20.52■□□□□ 0.88
MSI2-201ENST00000284073 RRP7BPQ9NSQ0 103 aa20.52■□□□□ 0.88
MSI2-201ENST00000284073 GZF1Q9H116 711 aaPredicted RBP20.5■□□□□ 0.87
MSI2-201ENST00000284073 SIN3AQ96ST3 1273 aa20.49■□□□□ 0.87
MSI2-201ENST00000284073 FTSJ3Q8IY81 847 aaKnown RBP20.49■□□□□ 0.87
MSI2-201ENST00000284073 FRAT1Q92837 279 aaPredicted RBP20.48■□□□□ 0.87
MSI2-201ENST00000284073 NEUROD2Q15784 382 aa20.47■□□□□ 0.87
MSI2-201ENST00000284073 CHAF1AQ13111 956 aaPredicted RBP20.45■□□□□ 0.86
MSI2-201ENST00000284073 CLIP1P30622 1438 aa20.44■□□□□ 0.86
MSI2-201ENST00000284073 CASC1Q6TDU7 716 aa20.44■□□□□ 0.86
MSI2-201ENST00000284073 STAG3Q9UJ98 1225 aa20.43■□□□□ 0.86
MSI2-201ENST00000284073 HSCBQ8IWL3 235 aa20.41■□□□□ 0.86
MSI2-201ENST00000284073 VSIG10Q8N0Z9 540 aa20.4■□□□□ 0.86
MSI2-201ENST00000284073 SLKQ9H2G2 1235 aaPredicted RBP20.39■□□□□ 0.86
MSI2-201ENST00000284073 SENP3Q9H4L4 574 aaPredicted RBP20.38■□□□□ 0.85
MSI2-201ENST00000284073 MTUS2Q5JR59 1369 aa20.37■□□□□ 0.85
MSI2-201ENST00000284073 CEP162Q5TB80 1403 aa20.37■□□□□ 0.85
MSI2-201ENST00000284073 IPO9Q96P70 1041 aaKnown RBP20.37■□□□□ 0.85
MSI2-201ENST00000284073 RGL3Q3MIN7 710 aa20.35■□□□□ 0.85
MSI2-201ENST00000284073 HSP90AA2PQ14568 343 aaPredicted RBP20.35■□□□□ 0.85
MSI2-201ENST00000284073 TAOK2Q9UL54 1235 aa20.35■□□□□ 0.85
MSI2-201ENST00000284073 KNSTRNQ9Y448 316 aa20.34■□□□□ 0.85
MSI2-201ENST00000284073 ABCC9O60706 1549 aa20.34■□□□□ 0.85
MSI2-201ENST00000284073 CCER2I3L3R5 266 aa20.31■□□□□ 0.84
MSI2-201ENST00000284073 GOLGA6L6A8MZA4 724 aa20.3■□□□□ 0.84
MSI2-201ENST00000284073 CC2D1BQ5T0F9 858 aaKnown RBP20.3■□□□□ 0.84
MSI2-201ENST00000284073 CARD11Q9BXL7 1154 aa20.3■□□□□ 0.84
MSI2-201ENST00000284073 TSPY4P0CV99 314 aa20.3■□□□□ 0.84
MSI2-201ENST00000284073 TSPY10P0CW01 314 aa20.3■□□□□ 0.84
MSI2-201ENST00000284073 DRC7Q8IY82 874 aa20.3■□□□□ 0.84
MSI2-201ENST00000284073 GOLGA6L3A6NEY3 463 aa20.28■□□□□ 0.84
MSI2-201ENST00000284073 TNNT3P45378 269 aaPredicted RBP20.26■□□□□ 0.83
MSI2-201ENST00000284073 CFAP53Q96M91 514 aa20.25■□□□□ 0.83
MSI2-201ENST00000284073 TIMELESSQ9UNS1 1208 aa20.25■□□□□ 0.83
MSI2-201ENST00000284073 RSPH6AQ9H0K4 717 aa20.25■□□□□ 0.83
MSI2-201ENST00000284073 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
MSI2-201ENST00000284073 NRDCO43847 1150 aa20.24■□□□□ 0.83
MSI2-201ENST00000284073 TCERG1O14776 1098 aaKnown RBP20.23■□□□□ 0.83
MSI2-201ENST00000284073 GOLGA6L4A6NEF3 574 aa20.22■□□□□ 0.83
MSI2-201ENST00000284073 KIAA2012Q0VF49 1180 aa20.21■□□□□ 0.83
MSI2-201ENST00000284073 GBP4Q96PP9 640 aa20.2■□□□□ 0.82
MSI2-201ENST00000284073 ESF1Q9H501 851 aaKnown RBP20.19■□□□□ 0.82
MSI2-201ENST00000284073 PLEKHG5O94827 1062 aa20.19■□□□□ 0.82
MSI2-201ENST00000284073 TULP1O00294 542 aaPredicted RBP20.19■□□□□ 0.82
MSI2-201ENST00000284073 ZCCHC6Q5VYS8 1495 aaKnown RBP20.15■□□□□ 0.82
MSI2-201ENST00000284073 MAPK8IP3Q9UPT6 1336 aa20.15■□□□□ 0.82
MSI2-201ENST00000284073 NAP1L2Q9ULW6 460 aaPredicted RBP20.15■□□□□ 0.82
MSI2-201ENST00000284073 FGD1P98174 961 aa20.14■□□□□ 0.82
MSI2-201ENST00000284073 RCAN3Q9UKA8 241 aa20.14■□□□□ 0.81
MSI2-201ENST00000284073 SLC4A3P48751 1232 aa20.13■□□□□ 0.81
MSI2-201ENST00000284073 KCNJ4P48050 445 aa20.13■□□□□ 0.81
MSI2-201ENST00000284073 GSE1Q14687 1217 aa20.12■□□□□ 0.81
MSI2-201ENST00000284073 GOLGA3Q08378 1498 aa20.12■□□□□ 0.81
MSI2-201ENST00000284073 CDCA8Q53HL2 280 aa20.1■□□□□ 0.81
MSI2-201ENST00000284073 MS4A1P11836 297 aa20.09■□□□□ 0.81
MSI2-201ENST00000284073 KCNH8Q96L42 1107 aa20.09■□□□□ 0.81
MSI2-201ENST00000284073 HSPA5P11021 654 aaKnown RBP20.09■□□□□ 0.81
MSI2-201ENST00000284073 USP35Q9P2H5 1018 aa20.08■□□□□ 0.8
MSI2-201ENST00000284073 FOXD4L1Q9NU39 408 aa20.07■□□□□ 0.8
MSI2-201ENST00000284073 U2SURPO15042 1029 aaKnown RBP20.06■□□□□ 0.8
MSI2-201ENST00000284073 MFAP1P55081 439 aaKnown RBP20.06■□□□□ 0.8
MSI2-201ENST00000284073 PTMSP20962 102 aa20.05■□□□□ 0.8
MSI2-201ENST00000284073 A0A0G2JS52 829 aa20.05■□□□□ 0.8
MSI2-201ENST00000284073 OS9Q13438 667 aaPredicted RBP20.05■□□□□ 0.8
MSI2-201ENST00000284073 C14orf37Q86TY3 774 aa20.04■□□□□ 0.8
MSI2-201ENST00000284073 ANO8Q9HCE9 1232 aaPredicted RBP20.04■□□□□ 0.8
MSI2-201ENST00000284073 CHMP4BQ9H444 224 aaKnown RBP20.04■□□□□ 0.8
MSI2-201ENST00000284073 APBB1O00213 710 aa20.04■□□□□ 0.8
MSI2-201ENST00000284073 NUDCQ9Y266 331 aa20.03■□□□□ 0.8
MSI2-201ENST00000284073 SCRIBQ14160 1630 aa20.03■□□□□ 0.8
MSI2-201ENST00000284073 TNIKQ9UKE5 1360 aa20.02■□□□□ 0.8
MSI2-201ENST00000284073 MCCP23508 829 aa20.02■□□□□ 0.79
MSI2-201ENST00000284073 CALD1Q05682 793 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms