RNA–Protein interactions for RNA: ENST00000282344.10

USP12-201, Transcript of ubiquitin specific peptidase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP12, Length 4,511 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-201ENST00000282344 KIF27Q86VH2 1401 aa29.37■■■□□ 2.29
USP12-201ENST00000282344 BAZ1BQ9UIG0 1483 aaKnown RBP29.36■■■□□ 2.29
USP12-201ENST00000282344 ABCC8Q09428 1581 aa29.36■■■□□ 2.29
USP12-201ENST00000282344 CCNB3Q8WWL7 1395 aa29.29■■■□□ 2.28
USP12-201ENST00000282344 ZBTB47Q9UFB7 747 aaPredicted RBP29.29■■■□□ 2.28
USP12-201ENST00000282344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.28■■■□□ 2.28
USP12-201ENST00000282344 KANK4Q5T7N3 995 aaPredicted RBP29.26■■■□□ 2.27
USP12-201ENST00000282344 ANP32EQ9BTT0 268 aa29.26■■■□□ 2.27
USP12-201ENST00000282344 VPS8Q8N3P4 1428 aa29.24■■■□□ 2.27
USP12-201ENST00000282344 TSPY4P0CV99 314 aa29.23■■■□□ 2.27
USP12-201ENST00000282344 TSPY10P0CW01 314 aa29.23■■■□□ 2.27
USP12-201ENST00000282344 CHGAP10645 457 aaKnown RBP29.14■■■□□ 2.25
USP12-201ENST00000282344 NEFMP07197 916 aa29.08■■■□□ 2.25
USP12-201ENST00000282344 WDR43Q15061 677 aaKnown RBP eCLIP29.03■■■□□ 2.24
USP12-201ENST00000282344 WIZO95785 1651 aa29.02■■■□□ 2.24
USP12-201ENST00000282344 EIF5BO60841 1220 aaKnown RBP29.02■■■□□ 2.24
USP12-201ENST00000282344 RGL3Q3MIN7 710 aa29.01■■■□□ 2.23
USP12-201ENST00000282344 CHMP7Q8WUX9 453 aaPredicted RBP28.99■■■□□ 2.23
USP12-201ENST00000282344 CARMIL1Q5VZK9 1371 aa28.97■■■□□ 2.23
USP12-201ENST00000282344 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.96■■■□□ 2.23
USP12-201ENST00000282344 B4GALNT3Q6L9W6 998 aa28.95■■■□□ 2.23
USP12-201ENST00000282344 SLC24A1O60721 1099 aa28.95■■■□□ 2.22
USP12-201ENST00000282344 PPP4R2Q9NY27 417 aa28.95■■■□□ 2.22
USP12-201ENST00000282344 UPF2Q9HAU5 1272 aaKnown RBP28.93■■■□□ 2.22
USP12-201ENST00000282344 SETD5Q9C0A6 1442 aa28.93■■■□□ 2.22
USP12-201ENST00000282344 TIMELESSQ9UNS1 1208 aa28.93■■■□□ 2.22
USP12-201ENST00000282344 CUX2O14529 1486 aa28.93■■■□□ 2.22
USP12-201ENST00000282344 CFDP1Q9UEE9 299 aaPredicted RBP28.92■■■□□ 2.22
USP12-201ENST00000282344 RAB3GAP2Q9H2M9 1393 aa28.91■■■□□ 2.22
USP12-201ENST00000282344 FHAD1B1AJZ9 1412 aa28.9■■■□□ 2.22
USP12-201ENST00000282344 CARD11Q9BXL7 1154 aa28.89■■■□□ 2.22
USP12-201ENST00000282344 RUSC2Q8N2Y8 1516 aa28.88■■■□□ 2.21
USP12-201ENST00000282344 CCER2I3L3R5 266 aa28.88■■■□□ 2.21
USP12-201ENST00000282344 RBM19Q9Y4C8 960 aaKnown RBP28.87■■■□□ 2.21
USP12-201ENST00000282344 PLEKHD1A6NEE1 506 aa28.85■■■□□ 2.21
USP12-201ENST00000282344 HSP90AA1P07900 732 aaKnown RBP28.84■■■□□ 2.21
USP12-201ENST00000282344 ARXQ96QS3 562 aa28.84■■■□□ 2.21
USP12-201ENST00000282344 TSHZ2Q9NRE2 1034 aa28.8■■■□□ 2.2
USP12-201ENST00000282344 HSPA5P11021 654 aaKnown RBP28.79■■■□□ 2.2
USP12-201ENST00000282344 KCNH8Q96L42 1107 aa28.79■■■□□ 2.2
USP12-201ENST00000282344 RAPGEF2Q9Y4G8 1499 aa28.76■■■□□ 2.19
USP12-201ENST00000282344 TOP2AP11388 1531 aaKnown RBP28.75■■■□□ 2.19
USP12-201ENST00000282344 FOXD1Q16676 465 aa28.75■■■□□ 2.19
USP12-201ENST00000282344 PPP1R15AO75807 674 aaPredicted RBP28.74■■■□□ 2.19
USP12-201ENST00000282344 DHX57Q6P158 1386 aaKnown RBP28.71■■■□□ 2.19
USP12-201ENST00000282344 STAG3Q9UJ98 1225 aa28.67■■■□□ 2.18
USP12-201ENST00000282344 SENP3Q9H4L4 574 aaPredicted RBP28.66■■■□□ 2.18
USP12-201ENST00000282344 ARHGAP35Q9NRY4 1499 aa28.66■■■□□ 2.18
USP12-201ENST00000282344 NOP58Q9Y2X3 529 aaKnown RBP28.65■■■□□ 2.18
USP12-201ENST00000282344 LAS1LQ9Y4W2 734 aaKnown RBP28.64■■■□□ 2.17
USP12-201ENST00000282344 KNSTRNQ9Y448 316 aa28.63■■■□□ 2.17
USP12-201ENST00000282344 DDRGK1Q96HY6 314 aa28.59■■■□□ 2.17
USP12-201ENST00000282344 CC2D1BQ5T0F9 858 aaKnown RBP28.59■■■□□ 2.17
USP12-201ENST00000282344 DCAF11Q8TEB1 546 aa28.58■■■□□ 2.17
USP12-201ENST00000282344 ANP32BQ92688 251 aaKnown RBP28.58■■■□□ 2.17
USP12-201ENST00000282344 NPM1P06748 294 aaKnown RBP eCLIP28.56■■■□□ 2.16
USP12-201ENST00000282344 RGS3P49796 1198 aa28.54■■■□□ 2.16
USP12-201ENST00000282344 NEUROD2Q15784 382 aa28.53■■■□□ 2.16
USP12-201ENST00000282344 MPHOSPH9Q99550 1183 aa28.51■■■□□ 2.15
USP12-201ENST00000282344 EIF4G1Q04637 1599 aaKnown RBP28.48■■■□□ 2.15
USP12-201ENST00000282344 L3MBTL2Q969R5 705 aa28.46■■■□□ 2.15
USP12-201ENST00000282344 PKD2Q13563 968 aa28.46■■■□□ 2.15
USP12-201ENST00000282344 PPM1GO15355 546 aaPredicted RBP28.46■■■□□ 2.15
USP12-201ENST00000282344 SMARCA2P51531 1590 aa28.46■■■□□ 2.15
USP12-201ENST00000282344 ESF1Q9H501 851 aaKnown RBP28.45■■■□□ 2.14
USP12-201ENST00000282344 CDCA8Q53HL2 280 aa28.45■■■□□ 2.14
USP12-201ENST00000282344 RTN4Q9NQC3 1192 aaKnown RBP28.44■■■□□ 2.14
USP12-201ENST00000282344 TDRD9Q8NDG6 1382 aaKnown RBP28.44■■■□□ 2.14
USP12-201ENST00000282344 BECN1Q14457 450 aa28.44■■■□□ 2.14
USP12-201ENST00000282344 FHOD3Q2V2M9 1422 aa28.43■■■□□ 2.14
USP12-201ENST00000282344 DEKP35659 375 aaKnown RBP28.38■■■□□ 2.13
USP12-201ENST00000282344 TNNT2P45379 298 aaPredicted RBP28.37■■■□□ 2.13
USP12-201ENST00000282344 FRAT1Q92837 279 aaPredicted RBP28.37■■■□□ 2.13
USP12-201ENST00000282344 FMN1Q68DA7 1419 aa28.37■■■□□ 2.13
USP12-201ENST00000282344 ERICH6BQ5W0A0 696 aa28.37■■■□□ 2.13
USP12-201ENST00000282344 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
USP12-201ENST00000282344 PLPPR3Q6T4P5 718 aa28.35■■■□□ 2.13
USP12-201ENST00000282344 ATAD2BQ9ULI0 1458 aa28.33■■■□□ 2.13
USP12-201ENST00000282344 CFAP53Q96M91 514 aa28.31■■■□□ 2.12
USP12-201ENST00000282344 TMF1P82094 1093 aa28.31■■■□□ 2.12
USP12-201ENST00000282344 MYH16Q9H6N6 1097 aa28.26■■■□□ 2.12
USP12-201ENST00000282344 FTSJ3Q8IY81 847 aaKnown RBP28.26■■■□□ 2.11
USP12-201ENST00000282344 RCAN3Q9UKA8 241 aa28.24■■■□□ 2.11
USP12-201ENST00000282344 NUDCQ9Y266 331 aa28.21■■■□□ 2.11
USP12-201ENST00000282344 NUP155O75694 1391 aa28.19■■■□□ 2.1
USP12-201ENST00000282344 CADPSQ9ULU8 1353 aa28.17■■■□□ 2.1
USP12-201ENST00000282344 KTN1Q86UP2 1357 aaKnown RBP28.16■■■□□ 2.1
USP12-201ENST00000282344 PRKRIP1Q9H875 184 aaPredicted RBP28.15■■■□□ 2.1
USP12-201ENST00000282344 GLIPR1L2Q4G1C9 344 aa28.12■■■□□ 2.09
USP12-201ENST00000282344 RALBP1Q15311 655 aa28.11■■■□□ 2.09
USP12-201ENST00000282344 TRIM44Q96DX7 344 aaPredicted RBP28.1■■■□□ 2.09
USP12-201ENST00000282344 ROCK2O75116 1388 aaKnown RBP28.1■■■□□ 2.09
USP12-201ENST00000282344 MAPK8IP3Q9UPT6 1336 aa28.09■■■□□ 2.09
USP12-201ENST00000282344 U2SURPO15042 1029 aaKnown RBP28.09■■■□□ 2.09
USP12-201ENST00000282344 KIF21BO75037 1637 aa28.08■■■□□ 2.09
USP12-201ENST00000282344 TCERG1O14776 1098 aaKnown RBP28.06■■■□□ 2.08
USP12-201ENST00000282344 IPO9Q96P70 1041 aaKnown RBP28.04■■■□□ 2.08
USP12-201ENST00000282344 NCLP19338 710 aaKnown RBP28.03■■■□□ 2.08
USP12-201ENST00000282344 IGF1RP08069 1367 aa28.03■■■□□ 2.08
USP12-201ENST00000282344 GOLGA6L22H0YM25 854 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms