RNA–Protein interactions for RNA: ENST00000272902.9

SUMF1-201, Transcript of sulfatase modifying factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMF1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-201ENST00000272902 EIF4G3O43432 1585 aaKnown RBP34.22■■■■□ 3.07
SUMF1-201ENST00000272902 ADAMTS12P58397 1594 aa34.21■■■■□ 3.07
SUMF1-201ENST00000272902 FHAD1B1AJZ9 1412 aa34.17■■■■□ 3.06
SUMF1-201ENST00000272902 APLP2Q06481 763 aa34.08■■■■□ 3.05
SUMF1-201ENST00000272902 SNAPC4Q5SXM2 1469 aa34.06■■■■□ 3.04
SUMF1-201ENST00000272902 EFCAB5A4FU69 1503 aa34.03■■■■□ 3.04
SUMF1-201ENST00000272902 P3H3Q8IVL6 736 aa34.02■■■■□ 3.04
SUMF1-201ENST00000272902 FHOD3Q2V2M9 1422 aa33.97■■■■□ 3.03
SUMF1-201ENST00000272902 SAMD9Q5K651 1589 aa33.92■■■■□ 3.02
SUMF1-201ENST00000272902 MAGI1Q96QZ7 1491 aaPredicted RBP33.91■■■■□ 3.02
SUMF1-201ENST00000272902 IQGAP2Q13576 1575 aa33.88■■■■□ 3.01
SUMF1-201ENST00000272902 HRCP23327 699 aa33.87■■■■□ 3.01
SUMF1-201ENST00000272902 GRIN2AQ12879 1464 aa33.87■■■■□ 3.01
SUMF1-201ENST00000272902 PCF11O94913 1555 aaKnown RBP33.86■■■■□ 3.01
SUMF1-201ENST00000272902 KANK4Q5T7N3 995 aaPredicted RBP33.85■■■■□ 3.01
SUMF1-201ENST00000272902 SYNJ2O15056 1496 aa33.81■■■■□ 3
SUMF1-201ENST00000272902 TIAM1Q13009 1591 aa33.76■■■■□ 3
SUMF1-201ENST00000272902 CHMP7Q8WUX9 453 aaPredicted RBP33.75■■■□□ 2.99
SUMF1-201ENST00000272902 FMN1Q68DA7 1419 aa33.73■■■□□ 2.99
SUMF1-201ENST00000272902 MAP3K1Q13233 1512 aa33.72■■■□□ 2.99
SUMF1-201ENST00000272902 KIAA0586Q9BVV6 1533 aa33.72■■■□□ 2.99
SUMF1-201ENST00000272902 FYCO1Q9BQS8 1478 aa33.71■■■□□ 2.99
SUMF1-201ENST00000272902 FBLN2P98095 1184 aa33.71■■■□□ 2.99
SUMF1-201ENST00000272902 CASKIN1Q8WXD9 1431 aa33.7■■■□□ 2.99
SUMF1-201ENST00000272902 CEP170Q5SW79 1584 aa33.7■■■□□ 2.98
SUMF1-201ENST00000272902 CFAP43Q8NDM7 1665 aa33.69■■■□□ 2.98
SUMF1-201ENST00000272902 ATP1B4Q9UN42 357 aaPredicted RBP33.68■■■□□ 2.98
SUMF1-201ENST00000272902 UGGT2Q9NYU1 1516 aa33.68■■■□□ 2.98
SUMF1-201ENST00000272902 LRRC9Q6ZRR7 1453 aa33.6■■■□□ 2.97
SUMF1-201ENST00000272902 LRRIQ1Q96JM4 1722 aa33.59■■■□□ 2.97
SUMF1-201ENST00000272902 NUP160Q12769 1436 aa33.57■■■□□ 2.97
SUMF1-201ENST00000272902 KIAA0556O60303 1618 aa33.54■■■□□ 2.96
SUMF1-201ENST00000272902 DISP1Q96F81 1524 aa33.54■■■□□ 2.96
SUMF1-201ENST00000272902 CHD1O14646 1710 aa33.49■■■□□ 2.95
SUMF1-201ENST00000272902 HNRNPUL2Q1KMD3 747 aaKnown RBP33.45■■■□□ 2.95
SUMF1-201ENST00000272902 RRBP1Q9P2E9 1410 aaKnown RBP33.44■■■□□ 2.94
SUMF1-201ENST00000272902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.4■■■□□ 2.94
SUMF1-201ENST00000272902 HECW1Q76N89 1606 aa33.39■■■□□ 2.94
SUMF1-201ENST00000272902 JPH4Q96JJ6 628 aa33.37■■■□□ 2.93
SUMF1-201ENST00000272902 PHLDB1Q86UU1 1377 aa33.35■■■□□ 2.93
SUMF1-201ENST00000272902 CCNB3Q8WWL7 1395 aa33.33■■■□□ 2.93
SUMF1-201ENST00000272902 CCDC18Q5T9S5 1454 aa33.31■■■□□ 2.92
SUMF1-201ENST00000272902 MTUS2Q5JR59 1369 aa33.29■■■□□ 2.92
SUMF1-201ENST00000272902 EPRSP07814 1512 aaKnown RBP33.28■■■□□ 2.92
SUMF1-201ENST00000272902 CARMIL2Q6F5E8 1435 aa33.27■■■□□ 2.92
SUMF1-201ENST00000272902 RAPGEF6Q8TEU7 1601 aa33.25■■■□□ 2.91
SUMF1-201ENST00000272902 CDK13Q14004 1512 aaKnown RBP33.24■■■□□ 2.91
SUMF1-201ENST00000272902 MAGI3Q5TCQ9 1506 aa33.24■■■□□ 2.91
SUMF1-201ENST00000272902 CCER1Q8TC90 406 aaPredicted RBP33.24■■■□□ 2.91
SUMF1-201ENST00000272902 ZEB1P37275 1124 aaPredicted RBP33.23■■■□□ 2.91
SUMF1-201ENST00000272902 EHBP1L1Q8N3D4 1523 aa33.21■■■□□ 2.91
SUMF1-201ENST00000272902 ARID3CA6NKF2 412 aa33.2■■■□□ 2.91
SUMF1-201ENST00000272902 NUP153P49790 1475 aaKnown RBP33.18■■■□□ 2.9
SUMF1-201ENST00000272902 SUPT6HQ7KZ85 1726 aaKnown RBP33.18■■■□□ 2.9
SUMF1-201ENST00000272902 PLB1Q6P1J6 1458 aa33.15■■■□□ 2.9
SUMF1-201ENST00000272902 PRG4Q92954 1404 aaPredicted RBP33.14■■■□□ 2.9
SUMF1-201ENST00000272902 NCOA2Q15596 1464 aa33.14■■■□□ 2.9
SUMF1-201ENST00000272902 SHROOM2Q13796 1616 aa33.11■■■□□ 2.89
SUMF1-201ENST00000272902 ITGAEP38570 1179 aa33.1■■■□□ 2.89
SUMF1-201ENST00000272902 FAM50AQ14320 339 aaKnown RBP33.07■■■□□ 2.88
SUMF1-201ENST00000272902 ARHGEF11O15085 1522 aa33.05■■■□□ 2.88
SUMF1-201ENST00000272902 FGD6Q6ZV73 1430 aa33.05■■■□□ 2.88
SUMF1-201ENST00000272902 ABCA8O94911 1581 aa33.01■■■□□ 2.88
SUMF1-201ENST00000272902 MYOM3Q5VTT5 1437 aa33.01■■■□□ 2.87
SUMF1-201ENST00000272902 CLASP1Q7Z460 1538 aa33■■■□□ 2.87
SUMF1-201ENST00000272902 ERCC6L2Q5T890 1561 aa32.97■■■□□ 2.87
SUMF1-201ENST00000272902 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.95■■■□□ 2.87
SUMF1-201ENST00000272902 PTPRGP23470 1445 aa32.94■■■□□ 2.86
SUMF1-201ENST00000272902 CDK11AQ9UQ88 783 aaPredicted RBP32.89■■■□□ 2.86
SUMF1-201ENST00000272902 PTPN23Q9H3S7 1636 aa32.88■■■□□ 2.85
SUMF1-201ENST00000272902 ATP10BO94823 1461 aa32.83■■■□□ 2.85
SUMF1-201ENST00000272902 TROQ12816 1431 aaPredicted RBP32.83■■■□□ 2.85
SUMF1-201ENST00000272902 RAB3GAP2Q9H2M9 1393 aa32.78■■■□□ 2.84
SUMF1-201ENST00000272902 KIF14Q15058 1648 aa32.78■■■□□ 2.84
SUMF1-201ENST00000272902 ADCY10Q96PN6 1610 aa32.77■■■□□ 2.84
SUMF1-201ENST00000272902 TCOF1Q13428 1488 aaKnown RBP32.76■■■□□ 2.84
SUMF1-201ENST00000272902 DHX57Q6P158 1386 aaKnown RBP32.76■■■□□ 2.83
SUMF1-201ENST00000272902 UACAQ9BZF9 1416 aa32.76■■■□□ 2.83
SUMF1-201ENST00000272902 SETD5Q9C0A6 1442 aa32.76■■■□□ 2.83
SUMF1-201ENST00000272902 MIA2Q96PC5 1412 aa32.75■■■□□ 2.83
SUMF1-201ENST00000272902 PTPRKQ15262 1439 aa32.74■■■□□ 2.83
SUMF1-201ENST00000272902 PLEKHD1A6NEE1 506 aa32.68■■■□□ 2.82
SUMF1-201ENST00000272902 ABCC2Q92887 1545 aa32.66■■■□□ 2.82
SUMF1-201ENST00000272902 ITSN2Q9NZM3 1697 aa32.64■■■□□ 2.82
SUMF1-201ENST00000272902 GPATCH8Q9UKJ3 1502 aaKnown RBP32.6■■■□□ 2.81
SUMF1-201ENST00000272902 ZNF644Q9H582 1327 aaPredicted RBP32.57■■■□□ 2.8
SUMF1-201ENST00000272902 CDC42BPAQ5VT25 1732 aa32.57■■■□□ 2.8
SUMF1-201ENST00000272902 HFM1A2PYH4 1435 aa32.56■■■□□ 2.8
SUMF1-201ENST00000272902 ABCC10Q5T3U5 1492 aa32.56■■■□□ 2.8
SUMF1-201ENST00000272902 CLSPNQ9HAW4 1339 aa32.55■■■□□ 2.8
SUMF1-201ENST00000272902 OSCARQ8IYS5 282 aa32.55■■■□□ 2.8
SUMF1-201ENST00000272902 CFDP1Q9UEE9 299 aaPredicted RBP32.52■■■□□ 2.8
SUMF1-201ENST00000272902 DNMT1P26358 1616 aaKnown RBP32.51■■■□□ 2.79
SUMF1-201ENST00000272902 NAIPQ13075 1403 aa32.51■■■□□ 2.79
SUMF1-201ENST00000272902 CHIC2Q9UKJ5 165 aa32.51■■■□□ 2.79
SUMF1-201ENST00000272902 UHRF1BP1LA0JNW5 1464 aa32.5■■■□□ 2.79
SUMF1-201ENST00000272902 CAMSAP2Q08AD1 1489 aa32.5■■■□□ 2.79
SUMF1-201ENST00000272902 ZCCHC11Q5TAX3 1644 aaKnown RBP32.5■■■□□ 2.79
SUMF1-201ENST00000272902 DAPK1P53355 1430 aa32.47■■■□□ 2.79
SUMF1-201ENST00000272902 MAPKBP1O60336 1514 aa32.45■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms