RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 NRDCO43847 1150 aa17.3■□□□□ 0.36
PRDM16-201ENST00000270722 CFAP53Q96M91 514 aa17.29■□□□□ 0.36
PRDM16-201ENST00000270722 CSRNP3Q8WYN3 585 aa17.27■□□□□ 0.36
PRDM16-201ENST00000270722 CHAF1AQ13111 956 aaPredicted RBP17.27■□□□□ 0.35
PRDM16-201ENST00000270722 PODXL2Q9NZ53 605 aa17.27■□□□□ 0.35
PRDM16-201ENST00000270722 APPP05067 770 aa17.26■□□□□ 0.35
PRDM16-201ENST00000270722 L1TD1Q5T7N2 865 aaKnown RBP17.26■□□□□ 0.35
PRDM16-201ENST00000270722 ARID3CA6NKF2 412 aa17.25■□□□□ 0.35
PRDM16-201ENST00000270722 GOLGA6L6A8MZA4 724 aa17.25■□□□□ 0.35
PRDM16-201ENST00000270722 DNTTIP2Q5QJE6 756 aaKnown RBP17.24■□□□□ 0.35
PRDM16-201ENST00000270722 P3H3Q8IVL6 736 aa17.24■□□□□ 0.35
PRDM16-201ENST00000270722 CCDC136Q96JN2 1154 aa17.23■□□□□ 0.35
PRDM16-201ENST00000270722 LAS1LQ9Y4W2 734 aaKnown RBP17.21■□□□□ 0.35
PRDM16-201ENST00000270722 CHMP7Q8WUX9 453 aaPredicted RBP17.21■□□□□ 0.35
PRDM16-201ENST00000270722 A0A0U1RQG5 324 aaPredicted RBP17.2■□□□□ 0.34
PRDM16-201ENST00000270722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.34
PRDM16-201ENST00000270722 AMER1Q5JTC6 1135 aaPredicted RBP17.19■□□□□ 0.34
PRDM16-201ENST00000270722 GOLGA2Q08379 1002 aa17.19■□□□□ 0.34
PRDM16-201ENST00000270722 HNRNPUQ00839 825 aaKnown RBP eCLIP17.18■□□□□ 0.34
PRDM16-201ENST00000270722 HDGFP51858 240 aaKnown RBP17.18■□□□□ 0.34
PRDM16-201ENST00000270722 ARID4BQ4LE39 1312 aaPredicted RBP17.17■□□□□ 0.34
PRDM16-201ENST00000270722 PNNQ9H307 717 aaKnown RBP17.16■□□□□ 0.34
PRDM16-201ENST00000270722 SETQ01105 290 aaPredicted RBP17.16■□□□□ 0.34
PRDM16-201ENST00000270722 MTUS2Q5JR59 1369 aa17.16■□□□□ 0.34
PRDM16-201ENST00000270722 HMGB1P09429 215 aaKnown RBP17.15■□□□□ 0.34
PRDM16-201ENST00000270722 PPM1GO15355 546 aaPredicted RBP17.15■□□□□ 0.34
PRDM16-201ENST00000270722 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
PRDM16-201ENST00000270722 MS4A1P11836 297 aa17.13■□□□□ 0.33
PRDM16-201ENST00000270722 ARXQ96QS3 562 aa17.12■□□□□ 0.33
PRDM16-201ENST00000270722 RSF1Q96T23 1441 aaPredicted RBP17.11■□□□□ 0.33
PRDM16-201ENST00000270722 CFAP44Q96MT7 982 aa17.11■□□□□ 0.33
PRDM16-201ENST00000270722 CHMP4AQ9BY43 222 aa17.11■□□□□ 0.33
PRDM16-201ENST00000270722 PTMAP06454 111 aaKnown RBP17.1■□□□□ 0.33
PRDM16-201ENST00000270722 ZBTB7CA1YPR0 619 aa17.1■□□□□ 0.33
PRDM16-201ENST00000270722 NUDCQ9Y266 331 aa17.1■□□□□ 0.33
PRDM16-201ENST00000270722 FAM9BQ8IZU0 186 aa17.08■□□□□ 0.32
PRDM16-201ENST00000270722 TMX4Q9H1E5 349 aaPredicted RBP17.08■□□□□ 0.32
PRDM16-201ENST00000270722 USP35Q9P2H5 1018 aa17.07■□□□□ 0.32
PRDM16-201ENST00000270722 PLEKHD1A6NEE1 506 aa17.06■□□□□ 0.32
PRDM16-201ENST00000270722 FGD1P98174 961 aa17.06■□□□□ 0.32
PRDM16-201ENST00000270722 HSP90AA2PQ14568 343 aaPredicted RBP17.05■□□□□ 0.32
PRDM16-201ENST00000270722 MSNP26038 577 aaKnown RBP17.05■□□□□ 0.32
PRDM16-201ENST00000270722 FTSJ3Q8IY81 847 aaKnown RBP17.04■□□□□ 0.32
PRDM16-201ENST00000270722 MAPK8IP3Q9UPT6 1336 aa17.04■□□□□ 0.32
PRDM16-201ENST00000270722 PKNOX2Q96KN3 472 aa17.03■□□□□ 0.32
PRDM16-201ENST00000270722 MRS2Q9HD23 443 aa17.03■□□□□ 0.32
PRDM16-201ENST00000270722 KNSTRNQ9Y448 316 aa17.03■□□□□ 0.32
PRDM16-201ENST00000270722 FKBP8Q14318 412 aa16.98■□□□□ 0.31
PRDM16-201ENST00000270722 RTN4Q9NQC3 1192 aaKnown RBP16.98■□□□□ 0.31
PRDM16-201ENST00000270722 KIAA2012Q0VF49 1180 aa16.97■□□□□ 0.31
PRDM16-201ENST00000270722 KDM2AQ9Y2K7 1162 aa16.96■□□□□ 0.31
PRDM16-201ENST00000270722 STK11IPQ8N1F8 1099 aa16.96■□□□□ 0.31
PRDM16-201ENST00000270722 TULP1O00294 542 aaPredicted RBP16.96■□□□□ 0.31
PRDM16-201ENST00000270722 CCDC34Q96HJ3 373 aa16.96■□□□□ 0.31
PRDM16-201ENST00000270722 OS9Q13438 667 aaPredicted RBP16.95■□□□□ 0.3
PRDM16-201ENST00000270722 KCNJ4P48050 445 aa16.95■□□□□ 0.3
PRDM16-201ENST00000270722 GOLGA6L1Q8N7Z2 621 aa16.95■□□□□ 0.3
PRDM16-201ENST00000270722 POGKQ9P215 609 aa16.94■□□□□ 0.3
PRDM16-201ENST00000270722 SALL2Q9Y467 1007 aaPredicted RBP16.93■□□□□ 0.3
PRDM16-201ENST00000270722 LMOD2Q6P5Q4 547 aa16.92■□□□□ 0.3
PRDM16-201ENST00000270722 GOLGA6L4A6NEF3 574 aa16.92■□□□□ 0.3
PRDM16-201ENST00000270722 CLSTN1O94985 981 aa16.92■□□□□ 0.3
PRDM16-201ENST00000270722 GOLGA6L3A6NEY3 463 aa16.92■□□□□ 0.3
PRDM16-201ENST00000270722 DEKP35659 375 aaKnown RBP16.92■□□□□ 0.3
PRDM16-201ENST00000270722 HDAC5Q9UQL6 1122 aa16.92■□□□□ 0.3
PRDM16-201ENST00000270722 KANK1Q14678 1352 aa16.91■□□□□ 0.3
PRDM16-201ENST00000270722 MCCP23508 829 aa16.9■□□□□ 0.3
PRDM16-201ENST00000270722 SCRIBQ14160 1630 aa16.9■□□□□ 0.3
PRDM16-201ENST00000270722 CHIC2Q9UKJ5 165 aa16.88■□□□□ 0.29
PRDM16-201ENST00000270722 VSIG10Q8N0Z9 540 aa16.88■□□□□ 0.29
PRDM16-201ENST00000270722 PRKCSHP14314 528 aaPredicted RBP16.87■□□□□ 0.29
PRDM16-201ENST00000270722 DDX10Q13206 875 aaKnown RBP16.87■□□□□ 0.29
PRDM16-201ENST00000270722 NOP58Q9Y2X3 529 aaKnown RBP16.87■□□□□ 0.29
PRDM16-201ENST00000270722 ANO8Q9HCE9 1232 aaPredicted RBP16.85■□□□□ 0.29
PRDM16-201ENST00000270722 PLEKHG5O94827 1062 aa16.84■□□□□ 0.29
PRDM16-201ENST00000270722 KCNH8Q96L42 1107 aa16.84■□□□□ 0.29
PRDM16-201ENST00000270722 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.83■□□□□ 0.29
PRDM16-201ENST00000270722 NEFHP12036 1026 aa16.83■□□□□ 0.28
PRDM16-201ENST00000270722 HTATSF1O43719 755 aaKnown RBP16.83■□□□□ 0.28
PRDM16-201ENST00000270722 GNL2Q13823 731 aaKnown RBP16.81■□□□□ 0.28
PRDM16-201ENST00000270722 CALD1Q05682 793 aaKnown RBP16.81■□□□□ 0.28
PRDM16-201ENST00000270722 EEA1Q15075 1411 aa16.8■□□□□ 0.28
PRDM16-201ENST00000270722 NOM1Q5C9Z4 860 aaKnown RBP16.8■□□□□ 0.28
PRDM16-201ENST00000270722 HOMEZQ8IX15 550 aa16.8■□□□□ 0.28
PRDM16-201ENST00000270722 CFDP1Q9UEE9 299 aaPredicted RBP16.8■□□□□ 0.28
PRDM16-201ENST00000270722 ISY1Q9ULR0 285 aaKnown RBP16.79■□□□□ 0.28
PRDM16-201ENST00000270722 ERCC6Q03468 1493 aa16.77■□□□□ 0.28
PRDM16-201ENST00000270722 NAP1L2Q9ULW6 460 aaPredicted RBP16.76■□□□□ 0.27
PRDM16-201ENST00000270722 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
PRDM16-201ENST00000270722 KRI1Q8N9T8 703 aaKnown RBP16.74■□□□□ 0.27
PRDM16-201ENST00000270722 RTF1Q92541 710 aaKnown RBP16.74■□□□□ 0.27
PRDM16-201ENST00000270722 NOC3LQ8WTT2 800 aaKnown RBP16.74■□□□□ 0.27
PRDM16-201ENST00000270722 KIAA1211Q6ZU35 1233 aa16.73■□□□□ 0.27
PRDM16-201ENST00000270722 PRM3Q9NNZ6 103 aa16.73■□□□□ 0.27
PRDM16-201ENST00000270722 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
PRDM16-201ENST00000270722 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
PRDM16-201ENST00000270722 CLIP1P30622 1438 aa16.71■□□□□ 0.27
PRDM16-201ENST00000270722 HSP90AB1P08238 724 aaKnown RBP16.71■□□□□ 0.27
PRDM16-201ENST00000270722 MTERF4Q7Z6M4 381 aaKnown RBP16.7■□□□□ 0.26
PRDM16-201ENST00000270722 CHMP4CQ96CF2 233 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms