RNA–Protein interactions for RNA: ENST00000266943.10

SLC46A3-201, Transcript of solute carrier family 46 member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC46A3, Length 3,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A3-201ENST00000266943 ADAMTS12P58397 1594 aa22.22■■□□□ 1.15
SLC46A3-201ENST00000266943 GRIN2BQ13224 1484 aa22.2■■□□□ 1.14
SLC46A3-201ENST00000266943 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
SLC46A3-201ENST00000266943 SNAPC4Q5SXM2 1469 aa22.11■■□□□ 1.13
SLC46A3-201ENST00000266943 EFCAB5A4FU69 1503 aa22.07■■□□□ 1.12
SLC46A3-201ENST00000266943 P3H3Q8IVL6 736 aa22.06■■□□□ 1.12
SLC46A3-201ENST00000266943 FHOD3Q2V2M9 1422 aa22.05■■□□□ 1.12
SLC46A3-201ENST00000266943 SAMD9Q5K651 1589 aa22.03■■□□□ 1.12
SLC46A3-201ENST00000266943 APLP2Q06481 763 aa22.02■■□□□ 1.12
SLC46A3-201ENST00000266943 PCF11O94913 1555 aaKnown RBP22.01■■□□□ 1.11
SLC46A3-201ENST00000266943 MAGI1Q96QZ7 1491 aaPredicted RBP21.99■■□□□ 1.11
SLC46A3-201ENST00000266943 IQGAP2Q13576 1575 aa21.98■■□□□ 1.11
SLC46A3-201ENST00000266943 GRIN2AQ12879 1464 aa21.98■■□□□ 1.11
SLC46A3-201ENST00000266943 HRCP23327 699 aa21.97■■□□□ 1.11
SLC46A3-201ENST00000266943 KANK4Q5T7N3 995 aaPredicted RBP21.97■■□□□ 1.11
SLC46A3-201ENST00000266943 SYNJ2O15056 1496 aa21.92■■□□□ 1.1
SLC46A3-201ENST00000266943 TIAM1Q13009 1591 aa21.92■■□□□ 1.1
SLC46A3-201ENST00000266943 CEP170Q5SW79 1584 aa21.9■■□□□ 1.1
SLC46A3-201ENST00000266943 CFAP43Q8NDM7 1665 aa21.89■■□□□ 1.1
SLC46A3-201ENST00000266943 FYCO1Q9BQS8 1478 aa21.88■■□□□ 1.09
SLC46A3-201ENST00000266943 MAP3K1Q13233 1512 aa21.86■■□□□ 1.09
SLC46A3-201ENST00000266943 LRRIQ1Q96JM4 1722 aa21.86■■□□□ 1.09
SLC46A3-201ENST00000266943 KIAA0586Q9BVV6 1533 aa21.86■■□□□ 1.09
SLC46A3-201ENST00000266943 CASKIN1Q8WXD9 1431 aa21.86■■□□□ 1.09
SLC46A3-201ENST00000266943 UGGT2Q9NYU1 1516 aa21.85■■□□□ 1.09
SLC46A3-201ENST00000266943 FMN1Q68DA7 1419 aa21.85■■□□□ 1.09
SLC46A3-201ENST00000266943 CHMP7Q8WUX9 453 aaPredicted RBP21.84■■□□□ 1.09
SLC46A3-201ENST00000266943 FBLN2P98095 1184 aa21.83■■□□□ 1.08
SLC46A3-201ENST00000266943 ATP1B4Q9UN42 357 aaPredicted RBP21.8■■□□□ 1.08
SLC46A3-201ENST00000266943 LRRC9Q6ZRR7 1453 aa21.8■■□□□ 1.08
SLC46A3-201ENST00000266943 DISP1Q96F81 1524 aa21.79■■□□□ 1.08
SLC46A3-201ENST00000266943 NUP160Q12769 1436 aa21.78■■□□□ 1.08
SLC46A3-201ENST00000266943 KIAA0556O60303 1618 aa21.78■■□□□ 1.08
SLC46A3-201ENST00000266943 CHD1O14646 1710 aa21.75■■□□□ 1.07
SLC46A3-201ENST00000266943 RRBP1Q9P2E9 1410 aaKnown RBP21.7■■□□□ 1.06
SLC46A3-201ENST00000266943 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
SLC46A3-201ENST00000266943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.67■■□□□ 1.06
SLC46A3-201ENST00000266943 HECW1Q76N89 1606 aa21.67■■□□□ 1.06
SLC46A3-201ENST00000266943 PHLDB1Q86UU1 1377 aa21.65■■□□□ 1.06
SLC46A3-201ENST00000266943 MAGI3Q5TCQ9 1506 aa21.62■■□□□ 1.05
SLC46A3-201ENST00000266943 CCNB3Q8WWL7 1395 aa21.61■■□□□ 1.05
SLC46A3-201ENST00000266943 JPH4Q96JJ6 628 aa21.6■■□□□ 1.05
SLC46A3-201ENST00000266943 CDK13Q14004 1512 aaKnown RBP21.6■■□□□ 1.05
SLC46A3-201ENST00000266943 EPRSP07814 1512 aaKnown RBP21.6■■□□□ 1.05
SLC46A3-201ENST00000266943 CCDC18Q5T9S5 1454 aa21.59■■□□□ 1.05
SLC46A3-201ENST00000266943 RAPGEF6Q8TEU7 1601 aa21.58■■□□□ 1.05
SLC46A3-201ENST00000266943 MTUS2Q5JR59 1369 aa21.56■■□□□ 1.04
SLC46A3-201ENST00000266943 EHBP1L1Q8N3D4 1523 aa21.55■■□□□ 1.04
SLC46A3-201ENST00000266943 ARID3CA6NKF2 412 aa21.54■■□□□ 1.04
SLC46A3-201ENST00000266943 NUP153P49790 1475 aaKnown RBP21.54■■□□□ 1.04
SLC46A3-201ENST00000266943 CARMIL2Q6F5E8 1435 aa21.53■■□□□ 1.04
SLC46A3-201ENST00000266943 CCER1Q8TC90 406 aaPredicted RBP21.53■■□□□ 1.04
SLC46A3-201ENST00000266943 SUPT6HQ7KZ85 1726 aaKnown RBP21.52■■□□□ 1.04
SLC46A3-201ENST00000266943 PLB1Q6P1J6 1458 aa21.52■■□□□ 1.04
SLC46A3-201ENST00000266943 SHROOM2Q13796 1616 aa21.5■■□□□ 1.03
SLC46A3-201ENST00000266943 NCOA2Q15596 1464 aa21.5■■□□□ 1.03
SLC46A3-201ENST00000266943 PRG4Q92954 1404 aaPredicted RBP21.49■■□□□ 1.03
SLC46A3-201ENST00000266943 ZEB1P37275 1124 aaPredicted RBP21.48■■□□□ 1.03
SLC46A3-201ENST00000266943 ARHGEF11O15085 1522 aa21.47■■□□□ 1.03
SLC46A3-201ENST00000266943 ITGAEP38570 1179 aa21.45■■□□□ 1.02
SLC46A3-201ENST00000266943 FGD6Q6ZV73 1430 aa21.44■■□□□ 1.02
SLC46A3-201ENST00000266943 ERCC6L2Q5T890 1561 aa21.44■■□□□ 1.02
SLC46A3-201ENST00000266943 ABCA8O94911 1581 aa21.44■■□□□ 1.02
SLC46A3-201ENST00000266943 CLASP1Q7Z460 1538 aa21.43■■□□□ 1.02
SLC46A3-201ENST00000266943 FAM50AQ14320 339 aaKnown RBP21.42■■□□□ 1.02
SLC46A3-201ENST00000266943 MYOM3Q5VTT5 1437 aa21.4■■□□□ 1.02
SLC46A3-201ENST00000266943 PTPN23Q9H3S7 1636 aa21.35■■□□□ 1.01
SLC46A3-201ENST00000266943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.34■■□□□ 1.01
SLC46A3-201ENST00000266943 PTPRGP23470 1445 aa21.34■■□□□ 1.01
SLC46A3-201ENST00000266943 KIF14Q15058 1648 aa21.3■■□□□ 1
SLC46A3-201ENST00000266943 ATP10BO94823 1461 aa21.3■■□□□ 1
SLC46A3-201ENST00000266943 TROQ12816 1431 aaPredicted RBP21.29■■□□□ 1
SLC46A3-201ENST00000266943 ADCY10Q96PN6 1610 aa21.28■■□□□ 1
SLC46A3-201ENST00000266943 PTPRKQ15262 1439 aa21.28■■□□□ 1
SLC46A3-201ENST00000266943 TCOF1Q13428 1488 aaKnown RBP21.27■■□□□ 1
SLC46A3-201ENST00000266943 DHX57Q6P158 1386 aaKnown RBP21.26■□□□□ 0.99
SLC46A3-201ENST00000266943 RAB3GAP2Q9H2M9 1393 aa21.26■□□□□ 0.99
SLC46A3-201ENST00000266943 CDK11AQ9UQ88 783 aaPredicted RBP21.24■□□□□ 0.99
SLC46A3-201ENST00000266943 UACAQ9BZF9 1416 aa21.23■□□□□ 0.99
SLC46A3-201ENST00000266943 SETD5Q9C0A6 1442 aa21.22■□□□□ 0.99
SLC46A3-201ENST00000266943 MIA2Q96PC5 1412 aa21.22■□□□□ 0.99
SLC46A3-201ENST00000266943 ABCC2Q92887 1545 aa21.19■□□□□ 0.98
SLC46A3-201ENST00000266943 ITSN2Q9NZM3 1697 aa21.17■□□□□ 0.98
SLC46A3-201ENST00000266943 CDC42BPAQ5VT25 1732 aa21.15■□□□□ 0.98
SLC46A3-201ENST00000266943 GPATCH8Q9UKJ3 1502 aaKnown RBP21.15■□□□□ 0.98
SLC46A3-201ENST00000266943 ABCC10Q5T3U5 1492 aa21.14■□□□□ 0.97
SLC46A3-201ENST00000266943 ZNF644Q9H582 1327 aaPredicted RBP21.14■□□□□ 0.97
SLC46A3-201ENST00000266943 PLEKHD1A6NEE1 506 aa21.13■□□□□ 0.97
SLC46A3-201ENST00000266943 HFM1A2PYH4 1435 aa21.12■□□□□ 0.97
SLC46A3-201ENST00000266943 DNMT1P26358 1616 aaKnown RBP21.1■□□□□ 0.97
SLC46A3-201ENST00000266943 ZCCHC11Q5TAX3 1644 aaKnown RBP21.1■□□□□ 0.97
SLC46A3-201ENST00000266943 MAPKBP1O60336 1514 aa21.1■□□□□ 0.97
SLC46A3-201ENST00000266943 CAMSAP2Q08AD1 1489 aa21.09■□□□□ 0.97
SLC46A3-201ENST00000266943 NAIPQ13075 1403 aa21.09■□□□□ 0.97
SLC46A3-201ENST00000266943 GCC2Q8IWJ2 1684 aa21.08■□□□□ 0.97
SLC46A3-201ENST00000266943 CHIC2Q9UKJ5 165 aa21.07■□□□□ 0.96
SLC46A3-201ENST00000266943 UHRF1BP1LA0JNW5 1464 aa21.07■□□□□ 0.96
SLC46A3-201ENST00000266943 DAPK1P53355 1430 aa21.07■□□□□ 0.96
SLC46A3-201ENST00000266943 CLSPNQ9HAW4 1339 aa21.05■□□□□ 0.96
SLC46A3-201ENST00000266943 ABCC5O15440 1437 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms