RNA–Protein interactions for RNA: ENST00000265636.9

PPP6R3-201, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PPP6R3, Length 4,794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-201ENST00000265636 UPF2Q9HAU5 1272 aaKnown RBP14.38□□□□□ -0.11
PPP6R3-201ENST00000265636 CHMP7Q8WUX9 453 aaPredicted RBP14.38□□□□□ -0.11
PPP6R3-201ENST00000265636 SIN3AQ96ST3 1273 aa14.37□□□□□ -0.11
PPP6R3-201ENST00000265636 ESF1Q9H501 851 aaKnown RBP14.36□□□□□ -0.11
PPP6R3-201ENST00000265636 EIF5BO60841 1220 aaKnown RBP14.36□□□□□ -0.11
PPP6R3-201ENST00000265636 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.35□□□□□ -0.11
PPP6R3-201ENST00000265636 NPM1P06748 294 aaKnown RBP eCLIP14.34□□□□□ -0.11
PPP6R3-201ENST00000265636 RGL3Q3MIN7 710 aa14.33□□□□□ -0.12
PPP6R3-201ENST00000265636 SUPT16HQ9Y5B9 1047 aaKnown RBP14.33□□□□□ -0.12
PPP6R3-201ENST00000265636 CEP164Q9UPV0 1460 aa14.32□□□□□ -0.12
PPP6R3-201ENST00000265636 RB1CC1Q8TDY2 1594 aa14.32□□□□□ -0.12
PPP6R3-201ENST00000265636 PLPPR3Q6T4P5 718 aa14.32□□□□□ -0.12
PPP6R3-201ENST00000265636 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
PPP6R3-201ENST00000265636 KIF27Q86VH2 1401 aa14.3□□□□□ -0.12
PPP6R3-201ENST00000265636 SENP3Q9H4L4 574 aaPredicted RBP14.29□□□□□ -0.12
PPP6R3-201ENST00000265636 KCNH8Q96L42 1107 aa14.28□□□□□ -0.12
PPP6R3-201ENST00000265636 ARXQ96QS3 562 aa14.28□□□□□ -0.12
PPP6R3-201ENST00000265636 SOGA1O94964 1423 aa14.27□□□□□ -0.12
PPP6R3-201ENST00000265636 BAZ1BQ9UIG0 1483 aaKnown RBP14.27□□□□□ -0.12
PPP6R3-201ENST00000265636 PLEKHD1A6NEE1 506 aa14.27□□□□□ -0.13
PPP6R3-201ENST00000265636 ANP32BQ92688 251 aaKnown RBP14.26□□□□□ -0.13
PPP6R3-201ENST00000265636 CFDP1Q9UEE9 299 aaPredicted RBP14.25□□□□□ -0.13
PPP6R3-201ENST00000265636 NACADO15069 1562 aa14.22□□□□□ -0.13
PPP6R3-201ENST00000265636 CARD11Q9BXL7 1154 aa14.22□□□□□ -0.13
PPP6R3-201ENST00000265636 CCNB3Q8WWL7 1395 aa14.2□□□□□ -0.14
PPP6R3-201ENST00000265636 BAZ1AQ9NRL2 1556 aaPredicted RBP14.18□□□□□ -0.14
PPP6R3-201ENST00000265636 ANP32EQ9BTT0 268 aa14.17□□□□□ -0.14
PPP6R3-201ENST00000265636 KANK4Q5T7N3 995 aaPredicted RBP14.15□□□□□ -0.14
PPP6R3-201ENST00000265636 KNSTRNQ9Y448 316 aa14.15□□□□□ -0.14
PPP6R3-201ENST00000265636 PPP4R2Q9NY27 417 aa14.13□□□□□ -0.15
PPP6R3-201ENST00000265636 NEUROD2Q15784 382 aa14.12□□□□□ -0.15
PPP6R3-201ENST00000265636 B4GALNT3Q6L9W6 998 aa14.12□□□□□ -0.15
PPP6R3-201ENST00000265636 CARMIL1Q5VZK9 1371 aa14.11□□□□□ -0.15
PPP6R3-201ENST00000265636 MYH16Q9H6N6 1097 aa14.09□□□□□ -0.15
PPP6R3-201ENST00000265636 VPS8Q8N3P4 1428 aa14.09□□□□□ -0.15
PPP6R3-201ENST00000265636 DDRGK1Q96HY6 314 aa14.09□□□□□ -0.15
PPP6R3-201ENST00000265636 CCDC88BA6NC98 1476 aa14.09□□□□□ -0.15
PPP6R3-201ENST00000265636 ABCC8Q09428 1581 aa14.08□□□□□ -0.15
PPP6R3-201ENST00000265636 MROH2BQ7Z745 1585 aa14.08□□□□□ -0.15
PPP6R3-201ENST00000265636 CDCA8Q53HL2 280 aa14.08□□□□□ -0.16
PPP6R3-201ENST00000265636 CC2D1BQ5T0F9 858 aaKnown RBP14.07□□□□□ -0.16
PPP6R3-201ENST00000265636 FHAD1B1AJZ9 1412 aa14.07□□□□□ -0.16
PPP6R3-201ENST00000265636 CUX2O14529 1486 aa14.07□□□□□ -0.16
PPP6R3-201ENST00000265636 TIMELESSQ9UNS1 1208 aa14.07□□□□□ -0.16
PPP6R3-201ENST00000265636 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
PPP6R3-201ENST00000265636 BECN1Q14457 450 aa14.06□□□□□ -0.16
PPP6R3-201ENST00000265636 PPM1GO15355 546 aaPredicted RBP14.06□□□□□ -0.16
PPP6R3-201ENST00000265636 DCAF11Q8TEB1 546 aa14.06□□□□□ -0.16
PPP6R3-201ENST00000265636 CFAP53Q96M91 514 aa14.06□□□□□ -0.16
PPP6R3-201ENST00000265636 RGS3P49796 1198 aa14.05□□□□□ -0.16
PPP6R3-201ENST00000265636 PPP1R15AO75807 674 aaPredicted RBP14.05□□□□□ -0.16
PPP6R3-201ENST00000265636 SETD5Q9C0A6 1442 aa14.04□□□□□ -0.16
PPP6R3-201ENST00000265636 TNNT2P45379 298 aaPredicted RBP14.04□□□□□ -0.16
PPP6R3-201ENST00000265636 FOXD1Q16676 465 aa14.03□□□□□ -0.16
PPP6R3-201ENST00000265636 LAS1LQ9Y4W2 734 aaKnown RBP14.03□□□□□ -0.16
PPP6R3-201ENST00000265636 HSPA5P11021 654 aaKnown RBP14.03□□□□□ -0.16
PPP6R3-201ENST00000265636 CCER2I3L3R5 266 aa14.02□□□□□ -0.16
PPP6R3-201ENST00000265636 FRAT1Q92837 279 aaPredicted RBP14.02□□□□□ -0.17
PPP6R3-201ENST00000265636 FTSJ3Q8IY81 847 aaKnown RBP14.01□□□□□ -0.17
PPP6R3-201ENST00000265636 ZBTB7CA1YPR0 619 aa14□□□□□ -0.17
PPP6R3-201ENST00000265636 C14orf37Q86TY3 774 aa14□□□□□ -0.17
PPP6R3-201ENST00000265636 RAB3GAP2Q9H2M9 1393 aa13.99□□□□□ -0.17
PPP6R3-201ENST00000265636 NOP58Q9Y2X3 529 aaKnown RBP13.98□□□□□ -0.17
PPP6R3-201ENST00000265636 RBM19Q9Y4C8 960 aaKnown RBP13.98□□□□□ -0.17
PPP6R3-201ENST00000265636 TMF1P82094 1093 aa13.95□□□□□ -0.18
PPP6R3-201ENST00000265636 EIF4G1Q04637 1599 aaKnown RBP13.95□□□□□ -0.18
PPP6R3-201ENST00000265636 MAPK8IP3Q9UPT6 1336 aa13.95□□□□□ -0.18
PPP6R3-201ENST00000265636 PKD2Q13563 968 aa13.95□□□□□ -0.18
PPP6R3-201ENST00000265636 GLIPR1L2Q4G1C9 344 aa13.94□□□□□ -0.18
PPP6R3-201ENST00000265636 ARHGAP35Q9NRY4 1499 aa13.94□□□□□ -0.18
PPP6R3-201ENST00000265636 TRIM44Q96DX7 344 aaPredicted RBP13.93□□□□□ -0.18
PPP6R3-201ENST00000265636 NUDCQ9Y266 331 aa13.93□□□□□ -0.18
PPP6R3-201ENST00000265636 NCLP19338 710 aaKnown RBP13.93□□□□□ -0.18
PPP6R3-201ENST00000265636 U2SURPO15042 1029 aaKnown RBP13.92□□□□□ -0.18
PPP6R3-201ENST00000265636 POGKQ9P215 609 aa13.92□□□□□ -0.18
PPP6R3-201ENST00000265636 GOLGA6L22H0YM25 854 aa13.92□□□□□ -0.18
PPP6R3-201ENST00000265636 MPHOSPH9Q99550 1183 aa13.91□□□□□ -0.18
PPP6R3-201ENST00000265636 RTN4Q9NQC3 1192 aaKnown RBP13.91□□□□□ -0.18
PPP6R3-201ENST00000265636 A0A0G2JS52 829 aa13.9□□□□□ -0.19
PPP6R3-201ENST00000265636 TDRD9Q8NDG6 1382 aaKnown RBP13.88□□□□□ -0.19
PPP6R3-201ENST00000265636 TPRNQ4KMQ1 711 aa13.87□□□□□ -0.19
PPP6R3-201ENST00000265636 ARID4BQ4LE39 1312 aaPredicted RBP13.87□□□□□ -0.19
PPP6R3-201ENST00000265636 WIZO95785 1651 aa13.86□□□□□ -0.19
PPP6R3-201ENST00000265636 L3MBTL2Q969R5 705 aa13.86□□□□□ -0.19
PPP6R3-201ENST00000265636 ERCC6Q03468 1493 aa13.85□□□□□ -0.19
PPP6R3-201ENST00000265636 SAFB2Q14151 953 aaKnown RBP eCLIP13.85□□□□□ -0.19
PPP6R3-201ENST00000265636 TSHZ2Q9NRE2 1034 aa13.85□□□□□ -0.19
PPP6R3-201ENST00000265636 CASC1Q6TDU7 716 aa13.83□□□□□ -0.2
PPP6R3-201ENST00000265636 MORC1Q86VD1 984 aa13.83□□□□□ -0.2
PPP6R3-201ENST00000265636 RAPGEF2Q9Y4G8 1499 aa13.83□□□□□ -0.2
PPP6R3-201ENST00000265636 NUP155O75694 1391 aa13.82□□□□□ -0.2
PPP6R3-201ENST00000265636 RCAN3Q9UKA8 241 aa13.82□□□□□ -0.2
PPP6R3-201ENST00000265636 KTN1Q86UP2 1357 aaKnown RBP13.81□□□□□ -0.2
PPP6R3-201ENST00000265636 ERICH6BQ5W0A0 696 aa13.81□□□□□ -0.2
PPP6R3-201ENST00000265636 RUSC2Q8N2Y8 1516 aa13.81□□□□□ -0.2
PPP6R3-201ENST00000265636 FMN1Q68DA7 1419 aa13.81□□□□□ -0.2
PPP6R3-201ENST00000265636 SRPK2P78362 688 aaKnown RBP13.81□□□□□ -0.2
PPP6R3-201ENST00000265636 MS4A1P11836 297 aa13.8□□□□□ -0.2
PPP6R3-201ENST00000265636 DEKP35659 375 aaKnown RBP13.8□□□□□ -0.2
PPP6R3-201ENST00000265636 PTMAP06454 111 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms