RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 CALRP27797 417 aaKnown RBP7.05□□□□□ -1.28
XRN1-201ENST00000264951 MRS2Q9HD23 443 aa7.05□□□□□ -1.28
XRN1-201ENST00000264951 BCL11AQ9H165 835 aa7.04□□□□□ -1.28
XRN1-201ENST00000264951 GOLGA6L1Q8N7Z2 621 aa7.04□□□□□ -1.28
XRN1-201ENST00000264951 NOP58Q9Y2X3 529 aaKnown RBP7.04□□□□□ -1.28
XRN1-201ENST00000264951 HTATSF1O43719 755 aaKnown RBP7.04□□□□□ -1.28
XRN1-201ENST00000264951 SETQ01105 290 aaPredicted RBP7.03□□□□□ -1.28
XRN1-201ENST00000264951 SYAP1Q96A49 352 aaPredicted RBP7.03□□□□□ -1.28
XRN1-201ENST00000264951 A0A0U1RQG5 324 aaPredicted RBP7.03□□□□□ -1.28
XRN1-201ENST00000264951 CFAP53Q96M91 514 aa7.03□□□□□ -1.28
XRN1-201ENST00000264951 GOLGA6L4A6NEF3 574 aa7.02□□□□□ -1.28
XRN1-201ENST00000264951 FAM9BQ8IZU0 186 aa7.01□□□□□ -1.29
XRN1-201ENST00000264951 PNNQ9H307 717 aaKnown RBP7.01□□□□□ -1.29
XRN1-201ENST00000264951 PPP4R2Q9NY27 417 aa7.01□□□□□ -1.29
XRN1-201ENST00000264951 ARXQ96QS3 562 aa7.01□□□□□ -1.29
XRN1-201ENST00000264951 MCCP23508 829 aa7.01□□□□□ -1.29
XRN1-201ENST00000264951 GBP4Q96PP9 640 aa7□□□□□ -1.29
XRN1-201ENST00000264951 CHMP4AQ9BY43 222 aa7□□□□□ -1.29
XRN1-201ENST00000264951 LAS1LQ9Y4W2 734 aaKnown RBP7□□□□□ -1.29
XRN1-201ENST00000264951 GOLGA6L3A6NEY3 463 aa7□□□□□ -1.29
XRN1-201ENST00000264951 RSPH6AQ9H0K4 717 aa6.99□□□□□ -1.29
XRN1-201ENST00000264951 HSCBQ8IWL3 235 aa6.99□□□□□ -1.29
XRN1-201ENST00000264951 EIF4G2P78344 907 aaKnown RBP eCLIP6.99□□□□□ -1.29
XRN1-201ENST00000264951 CSRNP3Q8WYN3 585 aa6.98□□□□□ -1.29
XRN1-201ENST00000264951 TPM4P67936 248 aa6.98□□□□□ -1.29
XRN1-201ENST00000264951 FTSJ3Q8IY81 847 aaKnown RBP6.98□□□□□ -1.29
XRN1-201ENST00000264951 CSPP1Q1MSJ5 1256 aa6.97□□□□□ -1.29
XRN1-201ENST00000264951 HSP90AB1P08238 724 aaKnown RBP6.97□□□□□ -1.29
XRN1-201ENST00000264951 CHMP4CQ96CF2 233 aa6.97□□□□□ -1.29
XRN1-201ENST00000264951 STAG3Q9UJ98 1225 aa6.97□□□□□ -1.29
XRN1-201ENST00000264951 GPS2Q13227 327 aa6.97□□□□□ -1.29
XRN1-201ENST00000264951 DDX10Q13206 875 aaKnown RBP6.96□□□□□ -1.29
XRN1-201ENST00000264951 PHF14O94880 888 aa6.96□□□□□ -1.3
XRN1-201ENST00000264951 NOC3LQ8WTT2 800 aaKnown RBP6.95□□□□□ -1.3
XRN1-201ENST00000264951 FGD1P98174 961 aa6.95□□□□□ -1.3
XRN1-201ENST00000264951 MTERF4Q7Z6M4 381 aaKnown RBP6.94□□□□□ -1.3
XRN1-201ENST00000264951 NUDCQ9Y266 331 aa6.94□□□□□ -1.3
XRN1-201ENST00000264951 TIMELESSQ9UNS1 1208 aa6.94□□□□□ -1.3
XRN1-201ENST00000264951 HDAC5Q9UQL6 1122 aa6.93□□□□□ -1.3
XRN1-201ENST00000264951 DRC7Q8IY82 874 aa6.93□□□□□ -1.3
XRN1-201ENST00000264951 TSPY4P0CV99 314 aa6.92□□□□□ -1.3
XRN1-201ENST00000264951 TSPY10P0CW01 314 aa6.92□□□□□ -1.3
XRN1-201ENST00000264951 CCDC180Q9P1Z9 1646 aa6.92□□□□□ -1.3
XRN1-201ENST00000264951 PLCB2Q00722 1185 aa6.92□□□□□ -1.3
XRN1-201ENST00000264951 KIF3AQ9Y496 699 aa6.92□□□□□ -1.3
XRN1-201ENST00000264951 EEA1Q15075 1411 aa6.91□□□□□ -1.3
XRN1-201ENST00000264951 KNSTRNQ9Y448 316 aa6.91□□□□□ -1.3
XRN1-201ENST00000264951 CCDC70Q6NSX1 233 aa6.91□□□□□ -1.3
XRN1-201ENST00000264951 HSP90AA2PQ14568 343 aaPredicted RBP6.91□□□□□ -1.3
XRN1-201ENST00000264951 NOM1Q5C9Z4 860 aaKnown RBP6.91□□□□□ -1.3
XRN1-201ENST00000264951 SCAF1Q9H7N4 1312 aaKnown RBP6.91□□□□□ -1.3
XRN1-201ENST00000264951 KCNJ4P48050 445 aa6.9□□□□□ -1.3
XRN1-201ENST00000264951 MAP7D2Q96T17 732 aa6.9□□□□□ -1.3
XRN1-201ENST00000264951 RSF1Q96T23 1441 aaPredicted RBP6.9□□□□□ -1.3
XRN1-201ENST00000264951 ZCCHC6Q5VYS8 1495 aaKnown RBP6.9□□□□□ -1.3
XRN1-201ENST00000264951 MAPK8IP3Q9UPT6 1336 aa6.9□□□□□ -1.3
XRN1-201ENST00000264951 DEKP35659 375 aaKnown RBP6.9□□□□□ -1.3
XRN1-201ENST00000264951 HMMRO75330 724 aa6.9□□□□□ -1.31
XRN1-201ENST00000264951 TPM3P06753 285 aa6.89□□□□□ -1.31
XRN1-201ENST00000264951 TEX35Q5T0J7 233 aa6.89□□□□□ -1.31
XRN1-201ENST00000264951 CDR1P51861 262 aa6.89□□□□□ -1.31
XRN1-201ENST00000264951 TCERG1O14776 1098 aaKnown RBP6.89□□□□□ -1.31
XRN1-201ENST00000264951 CALD1Q05682 793 aaKnown RBP6.88□□□□□ -1.31
XRN1-201ENST00000264951 SKOR2Q2VWA4 1001 aaPredicted RBP6.88□□□□□ -1.31
XRN1-201ENST00000264951 IPO8O15397 1037 aaKnown RBP6.88□□□□□ -1.31
XRN1-201ENST00000264951 NPM1P06748 294 aaKnown RBP eCLIP6.88□□□□□ -1.31
XRN1-201ENST00000264951 CCER2I3L3R5 266 aa6.88□□□□□ -1.31
XRN1-201ENST00000264951 ATP6V1DQ9Y5K8 247 aa6.87□□□□□ -1.31
XRN1-201ENST00000264951 DDX11L8A8MPP1 907 aa6.87□□□□□ -1.31
XRN1-201ENST00000264951 KIAA1211Q6ZU35 1233 aa6.87□□□□□ -1.31
XRN1-201ENST00000264951 CEP89Q96ST8 783 aa6.87□□□□□ -1.31
XRN1-201ENST00000264951 GNL2Q13823 731 aaKnown RBP6.86□□□□□ -1.31
XRN1-201ENST00000264951 ACBD3Q9H3P7 528 aa6.86□□□□□ -1.31
XRN1-201ENST00000264951 ZNF777Q9ULD5 760 aaPredicted RBP6.86□□□□□ -1.31
XRN1-201ENST00000264951 ANO8Q9HCE9 1232 aaPredicted RBP6.86□□□□□ -1.31
XRN1-201ENST00000264951 MTUS2Q5JR59 1369 aa6.85□□□□□ -1.31
XRN1-201ENST00000264951 RRP12Q5JTH9 1297 aaKnown RBP6.85□□□□□ -1.31
XRN1-201ENST00000264951 CWC15Q9P013 229 aaKnown RBP6.84□□□□□ -1.31
XRN1-201ENST00000264951 TPM1P09493 284 aa6.84□□□□□ -1.31
XRN1-201ENST00000264951 GOLGA2Q08379 1002 aa6.84□□□□□ -1.31
XRN1-201ENST00000264951 CHGAP10645 457 aaKnown RBP6.84□□□□□ -1.31
XRN1-201ENST00000264951 OS9Q13438 667 aaPredicted RBP6.84□□□□□ -1.31
XRN1-201ENST00000264951 MIER1Q8N108 512 aa6.84□□□□□ -1.31
XRN1-201ENST00000264951 TSR1Q2NL82 804 aaKnown RBP6.84□□□□□ -1.32
XRN1-201ENST00000264951 DHX8Q14562 1220 aaKnown RBP6.83□□□□□ -1.32
XRN1-201ENST00000264951 DCTN1Q14203 1278 aa6.83□□□□□ -1.32
XRN1-201ENST00000264951 SALL2Q9Y467 1007 aaPredicted RBP6.83□□□□□ -1.32
XRN1-201ENST00000264951 CCDC66A2RUB6 948 aa6.83□□□□□ -1.32
XRN1-201ENST00000264951 HSP90B1P14625 803 aaKnown RBP6.83□□□□□ -1.32
XRN1-201ENST00000264951 RWDD1Q9H446 243 aaPredicted RBP6.83□□□□□ -1.32
XRN1-201ENST00000264951 PHLDB1Q86UU1 1377 aa6.83□□□□□ -1.32
XRN1-201ENST00000264951 ARGLU1Q9NWB6 273 aaPredicted RBP6.82□□□□□ -1.32
XRN1-201ENST00000264951 CCDC191Q8NCU4 936 aa6.82□□□□□ -1.32
XRN1-201ENST00000264951 IPO7O95373 1038 aaKnown RBP6.81□□□□□ -1.32
XRN1-201ENST00000264951 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.81□□□□□ -1.32
XRN1-201ENST00000264951 GPATCH3Q96I76 525 aa6.81□□□□□ -1.32
XRN1-201ENST00000264951 RGS3P49796 1198 aa6.81□□□□□ -1.32
XRN1-201ENST00000264951 SUPT16HQ9Y5B9 1047 aaKnown RBP6.81□□□□□ -1.32
XRN1-201ENST00000264951 KIF16BQ96L93 1317 aa6.81□□□□□ -1.32
XRN1-201ENST00000264951 RTN4Q9NQC3 1192 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms