RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
LCN1-201ENST00000263598 KIF13AQ9H1H9 1805 aa15.82■□□□□ 0.12
LCN1-201ENST00000263598 FAM69CQ0P6D2 419 aa15.82■□□□□ 0.12
LCN1-201ENST00000263598 ABCC10Q5T3U5 1492 aa15.8■□□□□ 0.12
LCN1-201ENST00000263598 MAPKBP1O60336 1514 aa15.78■□□□□ 0.12
LCN1-201ENST00000263598 KIAA0586Q9BVV6 1533 aa15.78■□□□□ 0.12
LCN1-201ENST00000263598 KIF27Q86VH2 1401 aa15.77■□□□□ 0.11
LCN1-201ENST00000263598 IGF1RP08069 1367 aa15.76■□□□□ 0.11
LCN1-201ENST00000263598 ADCY10Q96PN6 1610 aa15.74■□□□□ 0.11
LCN1-201ENST00000263598 CUL7Q14999 1698 aa15.73■□□□□ 0.11
LCN1-201ENST00000263598 DIP2BQ9P265 1576 aa15.73■□□□□ 0.11
LCN1-201ENST00000263598 PTPRGP23470 1445 aa15.68■□□□□ 0.1
LCN1-201ENST00000263598 CARMIL1Q5VZK9 1371 aa15.67■□□□□ 0.1
LCN1-201ENST00000263598 CARMIL2Q6F5E8 1435 aa15.67■□□□□ 0.1
LCN1-201ENST00000263598 KDM6BO15054 1643 aa15.65■□□□□ 0.1
LCN1-201ENST00000263598 TTBK1Q5TCY1 1321 aaPredicted RBP15.65■□□□□ 0.1
LCN1-201ENST00000263598 TNIKQ9UKE5 1360 aa15.64■□□□□ 0.09
LCN1-201ENST00000263598 ABCC2Q92887 1545 aa15.61■□□□□ 0.09
LCN1-201ENST00000263598 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
LCN1-201ENST00000263598 IQGAP2Q13576 1575 aa15.58■□□□□ 0.09
LCN1-201ENST00000263598 KDM4FA0A1W2PPD8 638 aa15.58■□□□□ 0.08
LCN1-201ENST00000263598 PLB1Q6P1J6 1458 aa15.58■□□□□ 0.08
LCN1-201ENST00000263598 ASXL2Q76L83 1435 aa15.57■□□□□ 0.08
LCN1-201ENST00000263598 UHRF1BP1LA0JNW5 1464 aa15.56■□□□□ 0.08
LCN1-201ENST00000263598 UACAQ9BZF9 1416 aa15.55■□□□□ 0.08
LCN1-201ENST00000263598 GLI2P10070 1586 aa15.53■□□□□ 0.08
LCN1-201ENST00000263598 DISP1Q96F81 1524 aa15.52■□□□□ 0.07
LCN1-201ENST00000263598 RAPGEF2Q9Y4G8 1499 aa15.51■□□□□ 0.07
LCN1-201ENST00000263598 UGGT2Q9NYU1 1516 aa15.48■□□□□ 0.07
LCN1-201ENST00000263598 KDM5BQ9UGL1 1544 aa15.48■□□□□ 0.07
LCN1-201ENST00000263598 EPRSP07814 1512 aaKnown RBP15.47■□□□□ 0.07
LCN1-201ENST00000263598 PPRC1Q5VV67 1664 aaKnown RBP15.46■□□□□ 0.07
LCN1-201ENST00000263598 TEX14Q8IWB6 1497 aa15.46■□□□□ 0.06
LCN1-201ENST00000263598 KIAA0556O60303 1618 aa15.44■□□□□ 0.06
LCN1-201ENST00000263598 ZCCHC11Q5TAX3 1644 aaKnown RBP15.43■□□□□ 0.06
LCN1-201ENST00000263598 MAP3K4Q9Y6R4 1608 aa15.43■□□□□ 0.06
LCN1-201ENST00000263598 ADGRL1O94910 1474 aa15.41■□□□□ 0.06
LCN1-201ENST00000263598 COL17A1Q9UMD9 1497 aaPredicted RBP15.4■□□□□ 0.06
LCN1-201ENST00000263598 WDR7Q9Y4E6 1490 aa15.4■□□□□ 0.06
LCN1-201ENST00000263598 GOLGA3Q08378 1498 aa15.38■□□□□ 0.05
LCN1-201ENST00000263598 CTTNBP2Q8WZ74 1663 aa15.34■□□□□ 0.05
LCN1-201ENST00000263598 CD109Q6YHK3 1445 aa15.34■□□□□ 0.05
LCN1-201ENST00000263598 FAM9AQ8IZU1 332 aaPredicted RBP15.33■□□□□ 0.04
LCN1-201ENST00000263598 KCNH8Q96L42 1107 aa15.32■□□□□ 0.04
LCN1-201ENST00000263598 MAGI3Q5TCQ9 1506 aa15.31■□□□□ 0.04
LCN1-201ENST00000263598 ABCA8O94911 1581 aa15.31■□□□□ 0.04
LCN1-201ENST00000263598 ILDR1Q86SU0 546 aaPredicted RBP15.29■□□□□ 0.04
LCN1-201ENST00000263598 CFAP43Q8NDM7 1665 aa15.28■□□□□ 0.04
LCN1-201ENST00000263598 PRXQ9BXM0 1461 aa15.28■□□□□ 0.04
LCN1-201ENST00000263598 HECW2Q9P2P5 1572 aa15.24■□□□□ 0.03
LCN1-201ENST00000263598 ARID3CA6NKF2 412 aa15.21■□□□□ 0.03
LCN1-201ENST00000263598 P3H3Q8IVL6 736 aa15.21■□□□□ 0.03
LCN1-201ENST00000263598 ARAP3Q8WWN8 1544 aa15.2■□□□□ 0.02
LCN1-201ENST00000263598 ATP10BO94823 1461 aa15.2■□□□□ 0.02
LCN1-201ENST00000263598 PHLDB1Q86UU1 1377 aa15.19■□□□□ 0.02
LCN1-201ENST00000263598 KIF21BO75037 1637 aa15.15■□□□□ 0.02
LCN1-201ENST00000263598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.15■□□□□ 0.02
LCN1-201ENST00000263598 HNRNPUL2Q1KMD3 747 aaKnown RBP15.15■□□□□ 0.02
LCN1-201ENST00000263598 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
LCN1-201ENST00000263598 ABCA9Q8IUA7 1624 aa15.14■□□□□ 0.01
LCN1-201ENST00000263598 SAMD9Q5K651 1589 aa15.12■□□□□ 0.01
LCN1-201ENST00000263598 RAPGEF6Q8TEU7 1601 aa15.12■□□□□ 0.01
LCN1-201ENST00000263598 RAPGEF3O95398 923 aa15.11■□□□□ 0.01
LCN1-201ENST00000263598 NEO1Q92859 1461 aa15.11■□□□□ 0.01
LCN1-201ENST00000263598 RANGAP1P46060 587 aaPredicted RBP15.07■□□□□ 0
LCN1-201ENST00000263598 PTPRMP28827 1452 aa15.07■□□□□ 0
LCN1-201ENST00000263598 ARID4BQ4LE39 1312 aaPredicted RBP15.06■□□□□ 0
LCN1-201ENST00000263598 EEA1Q15075 1411 aa15.06■□□□□ 0
LCN1-201ENST00000263598 NUP153P49790 1475 aaKnown RBP15.06■□□□□ 0
LCN1-201ENST00000263598 PLEKHD1A6NEE1 506 aa15.05■□□□□ -0
LCN1-201ENST00000263598 ADAMTSL3P82987 1691 aa15.05■□□□□ -0
LCN1-201ENST00000263598 FHOD3Q2V2M9 1422 aa15.03■□□□□ -0
LCN1-201ENST00000263598 FRMPD1Q5SYB0 1578 aa15.02□□□□□ -0.01
LCN1-201ENST00000263598 DENND4BO75064 1496 aaPredicted RBP15.01□□□□□ -0.01
LCN1-201ENST00000263598 BCORL1Q5H9F3 1711 aa15□□□□□ -0.01
LCN1-201ENST00000263598 FBXO41Q8TF61 875 aa15□□□□□ -0.01
LCN1-201ENST00000263598 AKNAQ7Z591 1439 aa15□□□□□ -0.01
LCN1-201ENST00000263598 FANCAO15360 1455 aa14.99□□□□□ -0.01
LCN1-201ENST00000263598 CFAP74Q9C0B2 1584 aa14.98□□□□□ -0.01
LCN1-201ENST00000263598 EFCAB5A4FU69 1503 aa14.97□□□□□ -0.01
LCN1-201ENST00000263598 ARHGEF40Q8TER5 1519 aa14.97□□□□□ -0.01
LCN1-201ENST00000263598 MADDQ8WXG6 1647 aa14.97□□□□□ -0.01
LCN1-201ENST00000263598 PCF11O94913 1555 aaKnown RBP14.96□□□□□ -0.01
LCN1-201ENST00000263598 POGZQ7Z3K3 1410 aa14.96□□□□□ -0.01
LCN1-201ENST00000263598 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.96□□□□□ -0.02
LCN1-201ENST00000263598 RICTORQ6R327 1708 aa14.95□□□□□ -0.02
LCN1-201ENST00000263598 LMTK3Q96Q04 1460 aa14.94□□□□□ -0.02
LCN1-201ENST00000263598 MAGI2Q86UL8 1455 aa14.92□□□□□ -0.02
LCN1-201ENST00000263598 ZMYM4Q5VZL5 1548 aa14.92□□□□□ -0.02
LCN1-201ENST00000263598 ZFYVE16Q7Z3T8 1539 aa14.92□□□□□ -0.02
LCN1-201ENST00000263598 RIMS1Q86UR5 1692 aaKnown RBP14.91□□□□□ -0.02
LCN1-201ENST00000263598 TTC37Q6PGP7 1564 aa14.91□□□□□ -0.02
LCN1-201ENST00000263598 CDK13Q14004 1512 aaKnown RBP14.89□□□□□ -0.03
LCN1-201ENST00000263598 PLPPR3Q6T4P5 718 aa14.89□□□□□ -0.03
LCN1-201ENST00000263598 ATP1B4Q9UN42 357 aaPredicted RBP14.89□□□□□ -0.03
LCN1-201ENST00000263598 PLCH2O75038 1416 aa14.89□□□□□ -0.03
LCN1-201ENST00000263598 YEATS2Q9ULM3 1422 aa14.89□□□□□ -0.03
LCN1-201ENST00000263598 SCAPERQ9BY12 1400 aa14.88□□□□□ -0.03
LCN1-201ENST00000263598 CDK11AQ9UQ88 783 aaPredicted RBP14.87□□□□□ -0.03
LCN1-201ENST00000263598 FMN1Q68DA7 1419 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms