RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 APLP2Q06481 763 aa24.46■■□□□ 1.51
VPS26A-201ENST00000263559 FHAD1B1AJZ9 1412 aa24.43■■□□□ 1.5
VPS26A-201ENST00000263559 ADAMTS12P58397 1594 aa24.42■■□□□ 1.5
VPS26A-201ENST00000263559 HRCP23327 699 aa24.41■■□□□ 1.5
VPS26A-201ENST00000263559 EIF4G3O43432 1585 aaKnown RBP24.4■■□□□ 1.5
VPS26A-201ENST00000263559 P3H3Q8IVL6 736 aa24.36■■□□□ 1.49
VPS26A-201ENST00000263559 EFCAB5A4FU69 1503 aa24.34■■□□□ 1.49
VPS26A-201ENST00000263559 SNAPC4Q5SXM2 1469 aa24.31■■□□□ 1.48
VPS26A-201ENST00000263559 FHOD3Q2V2M9 1422 aa24.3■■□□□ 1.48
VPS26A-201ENST00000263559 KANK4Q5T7N3 995 aaPredicted RBP24.27■■□□□ 1.48
VPS26A-201ENST00000263559 SAMD9Q5K651 1589 aa24.25■■□□□ 1.47
VPS26A-201ENST00000263559 MAGI1Q96QZ7 1491 aaPredicted RBP24.22■■□□□ 1.47
VPS26A-201ENST00000263559 IQGAP2Q13576 1575 aa24.2■■□□□ 1.47
VPS26A-201ENST00000263559 PCF11O94913 1555 aaKnown RBP24.2■■□□□ 1.46
VPS26A-201ENST00000263559 GRIN2AQ12879 1464 aa24.19■■□□□ 1.46
VPS26A-201ENST00000263559 TIAM1Q13009 1591 aa24.17■■□□□ 1.46
VPS26A-201ENST00000263559 MAP3K1Q13233 1512 aa24.17■■□□□ 1.46
VPS26A-201ENST00000263559 FMN1Q68DA7 1419 aa24.15■■□□□ 1.46
VPS26A-201ENST00000263559 SYNJ2O15056 1496 aa24.14■■□□□ 1.46
VPS26A-201ENST00000263559 CASKIN1Q8WXD9 1431 aa24.13■■□□□ 1.45
VPS26A-201ENST00000263559 CHMP7Q8WUX9 453 aaPredicted RBP24.13■■□□□ 1.45
VPS26A-201ENST00000263559 FYCO1Q9BQS8 1478 aa24.13■■□□□ 1.45
VPS26A-201ENST00000263559 ATP1B4Q9UN42 357 aaPredicted RBP24.12■■□□□ 1.45
VPS26A-201ENST00000263559 KIAA0586Q9BVV6 1533 aa24.11■■□□□ 1.45
VPS26A-201ENST00000263559 CFAP43Q8NDM7 1665 aa24.09■■□□□ 1.45
VPS26A-201ENST00000263559 FBLN2P98095 1184 aa24.08■■□□□ 1.45
VPS26A-201ENST00000263559 UGGT2Q9NYU1 1516 aa24.07■■□□□ 1.44
VPS26A-201ENST00000263559 LRRC9Q6ZRR7 1453 aa24.06■■□□□ 1.44
VPS26A-201ENST00000263559 CEP170Q5SW79 1584 aa24.05■■□□□ 1.44
VPS26A-201ENST00000263559 HNRNPUL2Q1KMD3 747 aaKnown RBP24■■□□□ 1.43
VPS26A-201ENST00000263559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.99■■□□□ 1.43
VPS26A-201ENST00000263559 LRRIQ1Q96JM4 1722 aa23.99■■□□□ 1.43
VPS26A-201ENST00000263559 NUP160Q12769 1436 aa23.98■■□□□ 1.43
VPS26A-201ENST00000263559 DISP1Q96F81 1524 aa23.97■■□□□ 1.43
VPS26A-201ENST00000263559 RRBP1Q9P2E9 1410 aaKnown RBP23.97■■□□□ 1.43
VPS26A-201ENST00000263559 KIAA0556O60303 1618 aa23.96■■□□□ 1.43
VPS26A-201ENST00000263559 ZEB1P37275 1124 aaPredicted RBP23.95■■□□□ 1.42
VPS26A-201ENST00000263559 CCER1Q8TC90 406 aaPredicted RBP23.9■■□□□ 1.42
VPS26A-201ENST00000263559 CCNB3Q8WWL7 1395 aa23.9■■□□□ 1.42
VPS26A-201ENST00000263559 PHLDB1Q86UU1 1377 aa23.88■■□□□ 1.41
VPS26A-201ENST00000263559 HECW1Q76N89 1606 aa23.87■■□□□ 1.41
VPS26A-201ENST00000263559 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
VPS26A-201ENST00000263559 CHD1O14646 1710 aa23.86■■□□□ 1.41
VPS26A-201ENST00000263559 MTUS2Q5JR59 1369 aa23.84■■□□□ 1.41
VPS26A-201ENST00000263559 CCDC18Q5T9S5 1454 aa23.83■■□□□ 1.41
VPS26A-201ENST00000263559 EPRSP07814 1512 aaKnown RBP23.81■■□□□ 1.4
VPS26A-201ENST00000263559 CARMIL2Q6F5E8 1435 aa23.79■■□□□ 1.4
VPS26A-201ENST00000263559 MAGI3Q5TCQ9 1506 aa23.77■■□□□ 1.4
VPS26A-201ENST00000263559 CDK13Q14004 1512 aaKnown RBP23.76■■□□□ 1.39
VPS26A-201ENST00000263559 EHBP1L1Q8N3D4 1523 aa23.76■■□□□ 1.39
VPS26A-201ENST00000263559 RAPGEF6Q8TEU7 1601 aa23.75■■□□□ 1.39
VPS26A-201ENST00000263559 ARID3CA6NKF2 412 aa23.74■■□□□ 1.39
VPS26A-201ENST00000263559 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
VPS26A-201ENST00000263559 ITGAEP38570 1179 aa23.73■■□□□ 1.39
VPS26A-201ENST00000263559 NUP153P49790 1475 aaKnown RBP23.72■■□□□ 1.39
VPS26A-201ENST00000263559 NCOA2Q15596 1464 aa23.72■■□□□ 1.39
VPS26A-201ENST00000263559 FAM50AQ14320 339 aaKnown RBP23.7■■□□□ 1.39
VPS26A-201ENST00000263559 PLB1Q6P1J6 1458 aa23.69■■□□□ 1.38
VPS26A-201ENST00000263559 PRG4Q92954 1404 aaPredicted RBP23.68■■□□□ 1.38
VPS26A-201ENST00000263559 FGD6Q6ZV73 1430 aa23.66■■□□□ 1.38
VPS26A-201ENST00000263559 ARHGEF11O15085 1522 aa23.65■■□□□ 1.38
VPS26A-201ENST00000263559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.64■■□□□ 1.379e-8■□□□□ 9.9
VPS26A-201ENST00000263559 MYOM3Q5VTT5 1437 aa23.63■■□□□ 1.37
VPS26A-201ENST00000263559 SHROOM2Q13796 1616 aa23.62■■□□□ 1.37
VPS26A-201ENST00000263559 ABCA8O94911 1581 aa23.59■■□□□ 1.37
VPS26A-201ENST00000263559 CDK11AQ9UQ88 783 aaPredicted RBP23.56■■□□□ 1.36
VPS26A-201ENST00000263559 PTPRGP23470 1445 aa23.55■■□□□ 1.36
VPS26A-201ENST00000263559 CLASP1Q7Z460 1538 aa23.54■■□□□ 1.36
VPS26A-201ENST00000263559 PTPN23Q9H3S7 1636 aa23.53■■□□□ 1.36
VPS26A-201ENST00000263559 ERCC6L2Q5T890 1561 aa23.51■■□□□ 1.35
VPS26A-201ENST00000263559 DHX57Q6P158 1386 aaKnown RBP23.51■■□□□ 1.35
VPS26A-201ENST00000263559 RAB3GAP2Q9H2M9 1393 aa23.5■■□□□ 1.35
VPS26A-201ENST00000263559 SETD5Q9C0A6 1442 aa23.5■■□□□ 1.35
VPS26A-201ENST00000263559 TROQ12816 1431 aaPredicted RBP23.49■■□□□ 1.35
VPS26A-201ENST00000263559 ATP10BO94823 1461 aa23.48■■□□□ 1.35
VPS26A-201ENST00000263559 TCOF1Q13428 1488 aaKnown RBP23.46■■□□□ 1.35
VPS26A-201ENST00000263559 MIA2Q96PC5 1412 aa23.46■■□□□ 1.35
VPS26A-201ENST00000263559 PTPRKQ15262 1439 aa23.45■■□□□ 1.34
VPS26A-201ENST00000263559 ADCY10Q96PN6 1610 aa23.42■■□□□ 1.34
VPS26A-201ENST00000263559 UACAQ9BZF9 1416 aa23.41■■□□□ 1.34
VPS26A-201ENST00000263559 KIF14Q15058 1648 aa23.41■■□□□ 1.34
VPS26A-201ENST00000263559 PLEKHD1A6NEE1 506 aa23.4■■□□□ 1.34
VPS26A-201ENST00000263559 CLSPNQ9HAW4 1339 aa23.4■■□□□ 1.34
VPS26A-201ENST00000263559 HFM1A2PYH4 1435 aa23.33■■□□□ 1.33
VPS26A-201ENST00000263559 GPATCH8Q9UKJ3 1502 aaKnown RBP23.33■■□□□ 1.32
VPS26A-201ENST00000263559 ITSN2Q9NZM3 1697 aa23.33■■□□□ 1.32
VPS26A-201ENST00000263559 ABCC2Q92887 1545 aa23.32■■□□□ 1.32
VPS26A-201ENST00000263559 ZNF644Q9H582 1327 aaPredicted RBP23.31■■□□□ 1.32
VPS26A-201ENST00000263559 NAIPQ13075 1403 aa23.29■■□□□ 1.32
VPS26A-201ENST00000263559 CFDP1Q9UEE9 299 aaPredicted RBP23.29■■□□□ 1.32
VPS26A-201ENST00000263559 CHIC2Q9UKJ5 165 aa23.29■■□□□ 1.32
VPS26A-201ENST00000263559 ABCC10Q5T3U5 1492 aa23.28■■□□□ 1.32
VPS26A-201ENST00000263559 CDC42BPAQ5VT25 1732 aa23.27■■□□□ 1.31
VPS26A-201ENST00000263559 MAPKBP1O60336 1514 aa23.26■■□□□ 1.31
VPS26A-201ENST00000263559 DNMT1P26358 1616 aaKnown RBP23.25■■□□□ 1.31
VPS26A-201ENST00000263559 DAPK1P53355 1430 aa23.25■■□□□ 1.31
VPS26A-201ENST00000263559 OSCARQ8IYS5 282 aa23.25■■□□□ 1.31
VPS26A-201ENST00000263559 RRP7BPQ9NSQ0 103 aa23.24■■□□□ 1.31
VPS26A-201ENST00000263559 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
VPS26A-201ENST00000263559 ABCC5O15440 1437 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms