RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 HSP90AA1P07900 732 aaKnown RBP18.23■□□□□ 0.51
TCF3-201ENST00000262965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.23■□□□□ 0.51
TCF3-201ENST00000262965 SIN3AQ96ST3 1273 aa18.22■□□□□ 0.51
TCF3-201ENST00000262965 EIF4G2P78344 907 aaKnown RBP eCLIP18.22■□□□□ 0.513e-7■■■■■ 49.2
TCF3-201ENST00000262965 MTUS2Q5JR59 1369 aa18.21■□□□□ 0.5
TCF3-201ENST00000262965 SMARCA2P51531 1590 aa18.2■□□□□ 0.5
TCF3-201ENST00000262965 CCDC88BA6NC98 1476 aa18.19■□□□□ 0.5
TCF3-201ENST00000262965 UPF2Q9HAU5 1272 aaKnown RBP18.17■□□□□ 0.5
TCF3-201ENST00000262965 WIZO95785 1651 aa18.15■□□□□ 0.5
TCF3-201ENST00000262965 WDR43Q15061 677 aaKnown RBP eCLIP18.11■□□□□ 0.49
TCF3-201ENST00000262965 GOLGA3Q08378 1498 aa18.1■□□□□ 0.49
TCF3-201ENST00000262965 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.1■□□□□ 0.49
TCF3-201ENST00000262965 TOP2AP11388 1531 aaKnown RBP18.1■□□□□ 0.49
TCF3-201ENST00000262965 KIF27Q86VH2 1401 aa18.1■□□□□ 0.49
TCF3-201ENST00000262965 ANP32BQ92688 251 aaKnown RBP18.08■□□□□ 0.48
TCF3-201ENST00000262965 TNIKQ9UKE5 1360 aa18.08■□□□□ 0.48
TCF3-201ENST00000262965 B4GALNT3Q6L9W6 998 aa18.07■□□□□ 0.48
TCF3-201ENST00000262965 SMARCA4P51532 1647 aa18.06■□□□□ 0.48
TCF3-201ENST00000262965 TSPY4P0CV99 314 aa18.05■□□□□ 0.48
TCF3-201ENST00000262965 TSPY10P0CW01 314 aa18.05■□□□□ 0.48
TCF3-201ENST00000262965 SENP3Q9H4L4 574 aaPredicted RBP18.05■□□□□ 0.48
TCF3-201ENST00000262965 RTN4Q9NQC3 1192 aaKnown RBP18.05■□□□□ 0.48
TCF3-201ENST00000262965 ATAD2BQ9ULI0 1458 aa18.05■□□□□ 0.48
TCF3-201ENST00000262965 RGL3Q3MIN7 710 aa18.04■□□□□ 0.48
TCF3-201ENST00000262965 CHMP7Q8WUX9 453 aaPredicted RBP18.02■□□□□ 0.48
TCF3-201ENST00000262965 LAS1LQ9Y4W2 734 aaKnown RBP18.02■□□□□ 0.47
TCF3-201ENST00000262965 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
TCF3-201ENST00000262965 SOGA1O94964 1423 aa17.97■□□□□ 0.47
TCF3-201ENST00000262965 ABCC8Q09428 1581 aa17.97■□□□□ 0.47
TCF3-201ENST00000262965 PPP4R2Q9NY27 417 aa17.96■□□□□ 0.47
TCF3-201ENST00000262965 RBM19Q9Y4C8 960 aaKnown RBP17.96■□□□□ 0.47
TCF3-201ENST00000262965 STAG3Q9UJ98 1225 aa17.93■□□□□ 0.46
TCF3-201ENST00000262965 ERCC6Q03468 1493 aa17.92■□□□□ 0.46
TCF3-201ENST00000262965 RGS3P49796 1198 aa17.9■□□□□ 0.46
TCF3-201ENST00000262965 PLPPR3Q6T4P5 718 aa17.9■□□□□ 0.46
TCF3-201ENST00000262965 NOP58Q9Y2X3 529 aaKnown RBP17.89■□□□□ 0.45
TCF3-201ENST00000262965 CUX2O14529 1486 aa17.89■□□□□ 0.45
TCF3-201ENST00000262965 CARD11Q9BXL7 1154 aa17.88■□□□□ 0.45
TCF3-201ENST00000262965 CADPSQ9ULU8 1353 aa17.88■□□□□ 0.45
TCF3-201ENST00000262965 GLIPR1L2Q4G1C9 344 aa17.88■□□□□ 0.45
TCF3-201ENST00000262965 NEUROD2Q15784 382 aa17.87■□□□□ 0.45
TCF3-201ENST00000262965 CCNB3Q8WWL7 1395 aa17.86■□□□□ 0.45
TCF3-201ENST00000262965 KANK4Q5T7N3 995 aaPredicted RBP17.86■□□□□ 0.45
TCF3-201ENST00000262965 PDS5BQ9NTI5 1447 aa17.86■□□□□ 0.45
TCF3-201ENST00000262965 DDRGK1Q96HY6 314 aa17.86■□□□□ 0.45
TCF3-201ENST00000262965 TSHZ2Q9NRE2 1034 aa17.85■□□□□ 0.45
TCF3-201ENST00000262965 CARMIL1Q5VZK9 1371 aa17.83■□□□□ 0.44
TCF3-201ENST00000262965 KCNH8Q96L42 1107 aa17.81■□□□□ 0.44
TCF3-201ENST00000262965 BECN1Q14457 450 aa17.81■□□□□ 0.44
TCF3-201ENST00000262965 DEKP35659 375 aaKnown RBP17.8■□□□□ 0.44
TCF3-201ENST00000262965 CFDP1Q9UEE9 299 aaPredicted RBP17.79■□□□□ 0.44
TCF3-201ENST00000262965 PPM1GO15355 546 aaPredicted RBP17.78■□□□□ 0.44
TCF3-201ENST00000262965 CC2D1BQ5T0F9 858 aaKnown RBP17.78■□□□□ 0.44
TCF3-201ENST00000262965 ESF1Q9H501 851 aaKnown RBP17.78■□□□□ 0.44
TCF3-201ENST00000262965 KNSTRNQ9Y448 316 aa17.77■□□□□ 0.44
TCF3-201ENST00000262965 NPM1P06748 294 aaKnown RBP eCLIP17.76■□□□□ 0.43
TCF3-201ENST00000262965 FRAT1Q92837 279 aaPredicted RBP17.75■□□□□ 0.43
TCF3-201ENST00000262965 TRIM44Q96DX7 344 aaPredicted RBP17.75■□□□□ 0.43
TCF3-201ENST00000262965 FOXD1Q16676 465 aa17.75■□□□□ 0.43
TCF3-201ENST00000262965 PLEKHD1A6NEE1 506 aa17.74■□□□□ 0.43
TCF3-201ENST00000262965 TNNT2P45379 298 aaPredicted RBP17.74■□□□□ 0.43
TCF3-201ENST00000262965 CCER2I3L3R5 266 aa17.73■□□□□ 0.43
TCF3-201ENST00000262965 HSPA5P11021 654 aaKnown RBP17.73■□□□□ 0.43
TCF3-201ENST00000262965 NCLP19338 710 aaKnown RBP17.72■□□□□ 0.43
TCF3-201ENST00000262965 NCAPD3P42695 1498 aa17.72■□□□□ 0.43
TCF3-201ENST00000262965 MYH16Q9H6N6 1097 aa17.72■□□□□ 0.43
TCF3-201ENST00000262965 PLEKHG5O94827 1062 aa17.71■□□□□ 0.43
TCF3-201ENST00000262965 TPRNQ4KMQ1 711 aa17.71■□□□□ 0.43
TCF3-201ENST00000262965 EIF4G1Q04637 1599 aaKnown RBP17.7■□□□□ 0.42
TCF3-201ENST00000262965 VPS8Q8N3P4 1428 aa17.69■□□□□ 0.42
TCF3-201ENST00000262965 TDRD9Q8NDG6 1382 aaKnown RBP17.68■□□□□ 0.42
TCF3-201ENST00000262965 FTSJ3Q8IY81 847 aaKnown RBP17.66■□□□□ 0.42
TCF3-201ENST00000262965 DCAF11Q8TEB1 546 aa17.66■□□□□ 0.42
TCF3-201ENST00000262965 ERICH6BQ5W0A0 696 aa17.66■□□□□ 0.42
TCF3-201ENST00000262965 RAB3GAP2Q9H2M9 1393 aa17.65■□□□□ 0.42
TCF3-201ENST00000262965 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.41
TCF3-201ENST00000262965 FHAD1B1AJZ9 1412 aa17.63■□□□□ 0.41
TCF3-201ENST00000262965 NAP1L5Q96NT1 182 aaPredicted RBP17.63■□□□□ 0.41
TCF3-201ENST00000262965 TIMELESSQ9UNS1 1208 aa17.63■□□□□ 0.41
TCF3-201ENST00000262965 GOLGA6L22H0YM25 854 aa17.62■□□□□ 0.41
TCF3-201ENST00000262965 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
TCF3-201ENST00000262965 SPRYD3Q8NCJ5 442 aa17.61■□□□□ 0.41
TCF3-201ENST00000262965 CFAP53Q96M91 514 aa17.61■□□□□ 0.41
TCF3-201ENST00000262965 PPP1R15AO75807 674 aaPredicted RBP17.6■□□□□ 0.41
TCF3-201ENST00000262965 CDCA8Q53HL2 280 aa17.58■□□□□ 0.4
TCF3-201ENST00000262965 ZBTB7CA1YPR0 619 aa17.55■□□□□ 0.4
TCF3-201ENST00000262965 PTMAP06454 111 aaKnown RBP17.55■□□□□ 0.4
TCF3-201ENST00000262965 RUSC2Q8N2Y8 1516 aa17.54■□□□□ 0.4
TCF3-201ENST00000262965 U2SURPO15042 1029 aaKnown RBP17.54■□□□□ 0.4
TCF3-201ENST00000262965 DNTTIP2Q5QJE6 756 aaKnown RBP17.52■□□□□ 0.4
TCF3-201ENST00000262965 BICRAQ9NZM4 1560 aa17.52■□□□□ 0.4
TCF3-201ENST00000262965 C14orf37Q86TY3 774 aa17.52■□□□□ 0.39
TCF3-201ENST00000262965 RAPGEF2Q9Y4G8 1499 aa17.52■□□□□ 0.39
TCF3-201ENST00000262965 ARID4BQ4LE39 1312 aaPredicted RBP17.51■□□□□ 0.39
TCF3-201ENST00000262965 PKD2Q13563 968 aa17.51■□□□□ 0.39
TCF3-201ENST00000262965 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.51■□□□□ 0.39
TCF3-201ENST00000262965 RCAN3Q9UKA8 241 aa17.51■□□□□ 0.39
TCF3-201ENST00000262965 MAPK8IP3Q9UPT6 1336 aa17.51■□□□□ 0.39
TCF3-201ENST00000262965 SLKQ9H2G2 1235 aaPredicted RBP17.5■□□□□ 0.39
TCF3-201ENST00000262965 PLCB2Q00722 1185 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms