RNA–Protein interactions for RNA: ENST00000262545.6

PCSK2-201, Transcript of proprotein convertase subtilisin/kexin type 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK2, Length 4,740 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK2-201ENST00000262545 PODXL2Q9NZ53 605 aa13.67□□□□□ -0.22
PCSK2-201ENST00000262545 BICRAQ9NZM4 1560 aa13.65□□□□□ -0.22
PCSK2-201ENST00000262545 WIZO95785 1651 aa13.62□□□□□ -0.23
PCSK2-201ENST00000262545 SMARCA2P51531 1590 aa13.62□□□□□ -0.23
PCSK2-201ENST00000262545 SOGA1O94964 1423 aa13.62□□□□□ -0.23
PCSK2-201ENST00000262545 HSP90AA1P07900 732 aaKnown RBP13.62□□□□□ -0.23
PCSK2-201ENST00000262545 TOP2AP11388 1531 aaKnown RBP13.61□□□□□ -0.23
PCSK2-201ENST00000262545 ZNF777Q9ULD5 760 aaPredicted RBP13.61□□□□□ -0.23
PCSK2-201ENST00000262545 ZNF326Q5BKZ1 582 aaKnown RBP13.59□□□□□ -0.23
PCSK2-201ENST00000262545 A0A0U1RQG5 324 aaPredicted RBP13.59□□□□□ -0.23
PCSK2-201ENST00000262545 MTUS2Q5JR59 1369 aa13.58□□□□□ -0.24
PCSK2-201ENST00000262545 PKNOX2Q96KN3 472 aa13.58□□□□□ -0.24
PCSK2-201ENST00000262545 ARID4BQ4LE39 1312 aaPredicted RBP13.58□□□□□ -0.24
PCSK2-201ENST00000262545 PPM1GO15355 546 aaPredicted RBP13.57□□□□□ -0.24
PCSK2-201ENST00000262545 ABCC8Q09428 1581 aa13.57□□□□□ -0.24
PCSK2-201ENST00000262545 UPF2Q9HAU5 1272 aaKnown RBP13.55□□□□□ -0.24
PCSK2-201ENST00000262545 NOP58Q9Y2X3 529 aaKnown RBP13.55□□□□□ -0.24
PCSK2-201ENST00000262545 TONSLQ96HA7 1378 aa13.54□□□□□ -0.24
PCSK2-201ENST00000262545 HNRNPUQ00839 825 aaKnown RBP eCLIP13.54□□□□□ -0.24
PCSK2-201ENST00000262545 CHMP7Q8WUX9 453 aaPredicted RBP13.54□□□□□ -0.24
PCSK2-201ENST00000262545 MIER1Q8N108 512 aa13.53□□□□□ -0.24
PCSK2-201ENST00000262545 IRX6P78412 446 aaPredicted RBP13.52□□□□□ -0.25
PCSK2-201ENST00000262545 LAS1LQ9Y4W2 734 aaKnown RBP13.52□□□□□ -0.25
PCSK2-201ENST00000262545 SMARCA4P51532 1647 aa13.51□□□□□ -0.25
PCSK2-201ENST00000262545 DNTTIP2Q5QJE6 756 aaKnown RBP13.49□□□□□ -0.25
PCSK2-201ENST00000262545 CHIC2Q9UKJ5 165 aa13.49□□□□□ -0.25
PCSK2-201ENST00000262545 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
PCSK2-201ENST00000262545 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
PCSK2-201ENST00000262545 CUX2O14529 1486 aa13.48□□□□□ -0.25
PCSK2-201ENST00000262545 CANXP27824 592 aaKnown RBP13.47□□□□□ -0.25
PCSK2-201ENST00000262545 CARMIL1Q5VZK9 1371 aa13.47□□□□□ -0.25
PCSK2-201ENST00000262545 HSP90AA2PQ14568 343 aaPredicted RBP13.47□□□□□ -0.25
PCSK2-201ENST00000262545 RBM19Q9Y4C8 960 aaKnown RBP13.47□□□□□ -0.25
PCSK2-201ENST00000262545 DDRGK1Q96HY6 314 aa13.47□□□□□ -0.25
PCSK2-201ENST00000262545 SUPT16HQ9Y5B9 1047 aaKnown RBP13.46□□□□□ -0.26
PCSK2-201ENST00000262545 ANO8Q9HCE9 1232 aaPredicted RBP13.45□□□□□ -0.26
PCSK2-201ENST00000262545 PNNQ9H307 717 aaKnown RBP13.44□□□□□ -0.26
PCSK2-201ENST00000262545 VPS8Q8N3P4 1428 aa13.42□□□□□ -0.26
PCSK2-201ENST00000262545 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
PCSK2-201ENST00000262545 TNNT3P45378 269 aaPredicted RBP13.41□□□□□ -0.26
PCSK2-201ENST00000262545 TSPY4P0CV99 314 aa13.4□□□□□ -0.26
PCSK2-201ENST00000262545 TSPY10P0CW01 314 aa13.4□□□□□ -0.26
PCSK2-201ENST00000262545 FHAD1B1AJZ9 1412 aa13.4□□□□□ -0.26
PCSK2-201ENST00000262545 PTMAP06454 111 aaKnown RBP13.39□□□□□ -0.27
PCSK2-201ENST00000262545 DDX10Q13206 875 aaKnown RBP13.39□□□□□ -0.27
PCSK2-201ENST00000262545 ARID3AQ99856 593 aa13.39□□□□□ -0.27
PCSK2-201ENST00000262545 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
PCSK2-201ENST00000262545 CADPSQ9ULU8 1353 aa13.37□□□□□ -0.27
PCSK2-201ENST00000262545 TIMELESSQ9UNS1 1208 aa13.37□□□□□ -0.27
PCSK2-201ENST00000262545 CC2D2AQ9P2K1 1620 aa13.37□□□□□ -0.27
PCSK2-201ENST00000262545 TSHZ2Q9NRE2 1034 aa13.37□□□□□ -0.27
PCSK2-201ENST00000262545 RRP7BPQ9NSQ0 103 aa13.36□□□□□ -0.27
PCSK2-201ENST00000262545 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
PCSK2-201ENST00000262545 PLEKHD1A6NEE1 506 aa13.35□□□□□ -0.27
PCSK2-201ENST00000262545 BECN1Q14457 450 aa13.35□□□□□ -0.27
PCSK2-201ENST00000262545 CCNB3Q8WWL7 1395 aa13.34□□□□□ -0.27
PCSK2-201ENST00000262545 PDS5BQ9NTI5 1447 aa13.34□□□□□ -0.27
PCSK2-201ENST00000262545 ERCC6Q03468 1493 aa13.33□□□□□ -0.28
PCSK2-201ENST00000262545 FAM9BQ8IZU0 186 aa13.32□□□□□ -0.28
PCSK2-201ENST00000262545 HMGXB3Q12766 1538 aa13.31□□□□□ -0.28
PCSK2-201ENST00000262545 L1TD1Q5T7N2 865 aaKnown RBP13.3□□□□□ -0.28
PCSK2-201ENST00000262545 GOLGA6L22H0YM25 854 aa13.29□□□□□ -0.28
PCSK2-201ENST00000262545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.28
PCSK2-201ENST00000262545 CFDP1Q9UEE9 299 aaPredicted RBP13.28□□□□□ -0.28
PCSK2-201ENST00000262545 KANK4Q5T7N3 995 aaPredicted RBP13.27□□□□□ -0.28
PCSK2-201ENST00000262545 RUSC2Q8N2Y8 1516 aa13.27□□□□□ -0.29
PCSK2-201ENST00000262545 MSNP26038 577 aaKnown RBP13.27□□□□□ -0.29
PCSK2-201ENST00000262545 RAPGEF2Q9Y4G8 1499 aa13.27□□□□□ -0.29
PCSK2-201ENST00000262545 TDRD9Q8NDG6 1382 aaKnown RBP13.26□□□□□ -0.29
PCSK2-201ENST00000262545 PTMSP20962 102 aa13.25□□□□□ -0.29
PCSK2-201ENST00000262545 EIF4G2P78344 907 aaKnown RBP eCLIP13.24□□□□□ -0.29
PCSK2-201ENST00000262545 HIRIP3Q9BW71 556 aaPredicted RBP13.23□□□□□ -0.29
PCSK2-201ENST00000262545 SALL2Q9Y467 1007 aaPredicted RBP13.23□□□□□ -0.29
PCSK2-201ENST00000262545 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.22□□□□□ -0.29
PCSK2-201ENST00000262545 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
PCSK2-201ENST00000262545 KDM2AQ9Y2K7 1162 aa13.21□□□□□ -0.29
PCSK2-201ENST00000262545 PEG3Q9GZU2 1588 aa13.21□□□□□ -0.29
PCSK2-201ENST00000262545 NCAPD3P42695 1498 aa13.21□□□□□ -0.29
PCSK2-201ENST00000262545 CHGAP10645 457 aaKnown RBP13.21□□□□□ -0.29
PCSK2-201ENST00000262545 APPP05067 770 aa13.2□□□□□ -0.3
PCSK2-201ENST00000262545 FMN1Q68DA7 1419 aa13.2□□□□□ -0.3
PCSK2-201ENST00000262545 PPP4R2Q9NY27 417 aa13.2□□□□□ -0.3
PCSK2-201ENST00000262545 SIN3AQ96ST3 1273 aa13.2□□□□□ -0.3
PCSK2-201ENST00000262545 ARHGAP35Q9NRY4 1499 aa13.18□□□□□ -0.3
PCSK2-201ENST00000262545 CHAF1AQ13111 956 aaPredicted RBP13.18□□□□□ -0.3
PCSK2-201ENST00000262545 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
PCSK2-201ENST00000262545 SETD5Q9C0A6 1442 aa13.17□□□□□ -0.3
PCSK2-201ENST00000262545 ESF1Q9H501 851 aaKnown RBP13.15□□□□□ -0.3
PCSK2-201ENST00000262545 MRS2Q9HD23 443 aa13.14□□□□□ -0.31
PCSK2-201ENST00000262545 TMC1Q8TDI8 760 aa13.14□□□□□ -0.31
PCSK2-201ENST00000262545 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
PCSK2-201ENST00000262545 PDE4CQ08493 712 aa13.13□□□□□ -0.31
PCSK2-201ENST00000262545 B4GALNT3Q6L9W6 998 aa13.13□□□□□ -0.31
PCSK2-201ENST00000262545 STAG3Q9UJ98 1225 aa13.12□□□□□ -0.31
PCSK2-201ENST00000262545 FHOD3Q2V2M9 1422 aa13.11□□□□□ -0.31
PCSK2-201ENST00000262545 CALRP27797 417 aaKnown RBP13.1□□□□□ -0.31
PCSK2-201ENST00000262545 CARMIL2Q6F5E8 1435 aa13.1□□□□□ -0.31
PCSK2-201ENST00000262545 RAB3GAP2Q9H2M9 1393 aa13.09□□□□□ -0.31
PCSK2-201ENST00000262545 IGF1RP08069 1367 aa13.09□□□□□ -0.31
PCSK2-201ENST00000262545 RGL3Q3MIN7 710 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms