RNA–Protein interactions for RNA: ENST00000262305.8

RAB11FIP3-201, Transcript of RAB11 family interacting protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAB11FIP3, Length 4,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-201ENST00000262305 SLC24A1O60721 1099 aa29.63■■■□□ 2.33
RAB11FIP3-201ENST00000262305 CARMIL1Q5VZK9 1371 aa29.63■■■□□ 2.33
RAB11FIP3-201ENST00000262305 CFDP1Q9UEE9 299 aaPredicted RBP29.62■■■□□ 2.33
RAB11FIP3-201ENST00000262305 CUX2O14529 1486 aa29.61■■■□□ 2.33
RAB11FIP3-201ENST00000262305 KCNH8Q96L42 1107 aa29.6■■■□□ 2.33
RAB11FIP3-201ENST00000262305 HIRIP3Q9BW71 556 aaPredicted RBP29.6■■■□□ 2.33
RAB11FIP3-201ENST00000262305 MRS2Q9HD23 443 aa29.59■■■□□ 2.33
RAB11FIP3-201ENST00000262305 SMARCA2P51531 1590 aa29.57■■■□□ 2.32
RAB11FIP3-201ENST00000262305 FHAD1B1AJZ9 1412 aa29.57■■■□□ 2.32
RAB11FIP3-201ENST00000262305 ANP32AP39687 249 aaKnown RBP29.51■■■□□ 2.31
RAB11FIP3-201ENST00000262305 ERCC6Q03468 1493 aa29.5■■■□□ 2.31
RAB11FIP3-201ENST00000262305 SALL2Q9Y467 1007 aaPredicted RBP29.48■■■□□ 2.31
RAB11FIP3-201ENST00000262305 ABCC8Q09428 1581 aa29.48■■■□□ 2.31
RAB11FIP3-201ENST00000262305 CCNB3Q8WWL7 1395 aa29.46■■■□□ 2.31
RAB11FIP3-201ENST00000262305 BCL11AQ9H165 835 aa29.46■■■□□ 2.31
RAB11FIP3-201ENST00000262305 VPS8Q8N3P4 1428 aa29.42■■■□□ 2.3
RAB11FIP3-201ENST00000262305 WDR43Q15061 677 aaKnown RBP eCLIP29.42■■■□□ 2.3
RAB11FIP3-201ENST00000262305 TOP2AP11388 1531 aaKnown RBP29.41■■■□□ 2.3
RAB11FIP3-201ENST00000262305 PLPPR3Q6T4P5 718 aa29.37■■■□□ 2.29
RAB11FIP3-201ENST00000262305 RGL3Q3MIN7 710 aa29.35■■■□□ 2.29
RAB11FIP3-201ENST00000262305 WIZO95785 1651 aa29.35■■■□□ 2.29
RAB11FIP3-201ENST00000262305 SIN3AQ96ST3 1273 aa29.31■■■□□ 2.28
RAB11FIP3-201ENST00000262305 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.31■■■□□ 2.28
RAB11FIP3-201ENST00000262305 NPM2Q86SE8 214 aaKnown RBP29.3■■■□□ 2.28
RAB11FIP3-201ENST00000262305 CCDC136Q96JN2 1154 aa29.3■■■□□ 2.28
RAB11FIP3-201ENST00000262305 PDS5BQ9NTI5 1447 aa29.27■■■□□ 2.28
RAB11FIP3-201ENST00000262305 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.27
RAB11FIP3-201ENST00000262305 SCAF1Q9H7N4 1312 aaKnown RBP29.21■■■□□ 2.27
RAB11FIP3-201ENST00000262305 CARD11Q9BXL7 1154 aa29.2■■■□□ 2.27
RAB11FIP3-201ENST00000262305 TIMELESSQ9UNS1 1208 aa29.2■■■□□ 2.26
RAB11FIP3-201ENST00000262305 KANK4Q5T7N3 995 aaPredicted RBP29.18■■■□□ 2.26
RAB11FIP3-201ENST00000262305 CDCA8Q53HL2 280 aa29.17■■■□□ 2.26
RAB11FIP3-201ENST00000262305 ATAD2BQ9ULI0 1458 aa29.16■■■□□ 2.26
RAB11FIP3-201ENST00000262305 CADPSQ9ULU8 1353 aa29.16■■■□□ 2.26
RAB11FIP3-201ENST00000262305 TDRD9Q8NDG6 1382 aaKnown RBP29.14■■■□□ 2.26
RAB11FIP3-201ENST00000262305 UPF2Q9HAU5 1272 aaKnown RBP29.14■■■□□ 2.25
RAB11FIP3-201ENST00000262305 PPP1R15AO75807 674 aaPredicted RBP29.12■■■□□ 2.25
RAB11FIP3-201ENST00000262305 ARHGAP35Q9NRY4 1499 aa29.11■■■□□ 2.25
RAB11FIP3-201ENST00000262305 SETD5Q9C0A6 1442 aa29.1■■■□□ 2.25
RAB11FIP3-201ENST00000262305 SMARCA4P51532 1647 aa29.08■■■□□ 2.25
RAB11FIP3-201ENST00000262305 IRX6P78412 446 aaPredicted RBP29.08■■■□□ 2.25
RAB11FIP3-201ENST00000262305 FMN1Q68DA7 1419 aa29.07■■■□□ 2.24
RAB11FIP3-201ENST00000262305 KNSTRNQ9Y448 316 aa29.05■■■□□ 2.24
RAB11FIP3-201ENST00000262305 CARMIL2Q6F5E8 1435 aa29.01■■■□□ 2.23
RAB11FIP3-201ENST00000262305 SENP3Q9H4L4 574 aaPredicted RBP28.99■■■□□ 2.23
RAB11FIP3-201ENST00000262305 RAPGEF2Q9Y4G8 1499 aa28.97■■■□□ 2.23
RAB11FIP3-201ENST00000262305 HSP90AA1P07900 732 aaKnown RBP28.96■■■□□ 2.23
RAB11FIP3-201ENST00000262305 CFAP53Q96M91 514 aa28.95■■■□□ 2.22
RAB11FIP3-201ENST00000262305 DCAF11Q8TEB1 546 aa28.9■■■□□ 2.22
RAB11FIP3-201ENST00000262305 RAB3GAP2Q9H2M9 1393 aa28.88■■■□□ 2.21
RAB11FIP3-201ENST00000262305 ARID4BQ4LE39 1312 aaPredicted RBP28.87■■■□□ 2.21
RAB11FIP3-201ENST00000262305 KANK1Q14678 1352 aa28.84■■■□□ 2.21
RAB11FIP3-201ENST00000262305 SUPT16HQ9Y5B9 1047 aaKnown RBP28.83■■■□□ 2.21
RAB11FIP3-201ENST00000262305 PKD2Q13563 968 aa28.81■■■□□ 2.2
RAB11FIP3-201ENST00000262305 FHOD3Q2V2M9 1422 aa28.81■■■□□ 2.2
RAB11FIP3-201ENST00000262305 SENP3-EIF4A1A0A087X0R7 540 aa28.78■■■□□ 2.2
RAB11FIP3-201ENST00000262305 TMF1P82094 1093 aa28.78■■■□□ 2.2
RAB11FIP3-201ENST00000262305 MYH16Q9H6N6 1097 aa28.78■■■□□ 2.2
RAB11FIP3-201ENST00000262305 RUSC2Q8N2Y8 1516 aa28.78■■■□□ 2.2
RAB11FIP3-201ENST00000262305 POGKQ9P215 609 aa28.76■■■□□ 2.19
RAB11FIP3-201ENST00000262305 MPHOSPH9Q99550 1183 aa28.75■■■□□ 2.19
RAB11FIP3-201ENST00000262305 HSPA5P11021 654 aaKnown RBP28.74■■■□□ 2.19
RAB11FIP3-201ENST00000262305 C14orf37Q86TY3 774 aa28.74■■■□□ 2.19
RAB11FIP3-201ENST00000262305 CCER2I3L3R5 266 aa28.73■■■□□ 2.19
RAB11FIP3-201ENST00000262305 FANCD2Q9BXW9 1451 aa28.71■■■□□ 2.19
RAB11FIP3-201ENST00000262305 EFCAB2Q5VUJ9 269 aa28.71■■■□□ 2.19
RAB11FIP3-201ENST00000262305 ANKRD30AQ9BXX3 1397 aa28.7■■■□□ 2.19
RAB11FIP3-201ENST00000262305 FOXD1Q16676 465 aa28.7■■■□□ 2.19
RAB11FIP3-201ENST00000262305 NUDCQ9Y266 331 aa28.69■■■□□ 2.18
RAB11FIP3-201ENST00000262305 CC2D1BQ5T0F9 858 aaKnown RBP28.68■■■□□ 2.18
RAB11FIP3-201ENST00000262305 PPM1GO15355 546 aaPredicted RBP28.68■■■□□ 2.18
RAB11FIP3-201ENST00000262305 ANP32BQ92688 251 aaKnown RBP28.66■■■□□ 2.18
RAB11FIP3-201ENST00000262305 NUP155O75694 1391 aa28.66■■■□□ 2.18
RAB11FIP3-201ENST00000262305 ZBTB7CA1YPR0 619 aa28.63■■■□□ 2.17
RAB11FIP3-201ENST00000262305 MAPK8IP3Q9UPT6 1336 aa28.63■■■□□ 2.17
RAB11FIP3-201ENST00000262305 NEUROD2Q15784 382 aa28.63■■■□□ 2.17
RAB11FIP3-201ENST00000262305 JPH4Q96JJ6 628 aa28.61■■■□□ 2.17
RAB11FIP3-201ENST00000262305 PPP4R2Q9NY27 417 aa28.61■■■□□ 2.17
RAB11FIP3-201ENST00000262305 CCDC18Q5T9S5 1454 aa28.61■■■□□ 2.17
RAB11FIP3-201ENST00000262305 GGT6Q6P531 493 aa28.58■■■□□ 2.17
RAB11FIP3-201ENST00000262305 NBR1Q14596 966 aa28.57■■■□□ 2.16
RAB11FIP3-201ENST00000262305 PLEKHG5O94827 1062 aa28.57■■■□□ 2.16
RAB11FIP3-201ENST00000262305 RSPH4AQ5TD94 716 aa28.57■■■□□ 2.16
RAB11FIP3-201ENST00000262305 TNNT2P45379 298 aaPredicted RBP28.56■■■□□ 2.16
RAB11FIP3-201ENST00000262305 FTSJ3Q8IY81 847 aaKnown RBP28.52■■■□□ 2.16
RAB11FIP3-201ENST00000262305 DDRGK1Q96HY6 314 aa28.52■■■□□ 2.16
RAB11FIP3-201ENST00000262305 HDGFP51858 240 aaKnown RBP28.51■■■□□ 2.15
RAB11FIP3-201ENST00000262305 IGF1RP08069 1367 aa28.5■■■□□ 2.15
RAB11FIP3-201ENST00000262305 NCAPD3P42695 1498 aa28.49■■■□□ 2.15
RAB11FIP3-201ENST00000262305 L3MBTL2Q969R5 705 aa28.49■■■□□ 2.15
RAB11FIP3-201ENST00000262305 HNRNPMP52272 730 aaKnown RBP eCLIP28.49■■■□□ 2.157e-7■■■□□ 18
RAB11FIP3-201ENST00000262305 BECN1Q14457 450 aa28.47■■■□□ 2.15
RAB11FIP3-201ENST00000262305 U2SURPO15042 1029 aaKnown RBP28.46■■■□□ 2.15
RAB11FIP3-201ENST00000262305 MLECQ14165 292 aa28.46■■■□□ 2.15
RAB11FIP3-201ENST00000262305 FGD5Q6ZNL6 1462 aa28.46■■■□□ 2.15
RAB11FIP3-201ENST00000262305 ROCK2O75116 1388 aaKnown RBP28.45■■■□□ 2.15
RAB11FIP3-201ENST00000262305 SRPK2P78362 688 aaKnown RBP28.44■■■□□ 2.14
RAB11FIP3-201ENST00000262305 DHX57Q6P158 1386 aaKnown RBP28.44■■■□□ 2.14
RAB11FIP3-201ENST00000262305 PNNQ9H307 717 aaKnown RBP28.44■■■□□ 2.14
RAB11FIP3-201ENST00000262305 KTN1Q86UP2 1357 aaKnown RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms