RNA–Protein interactions for RNA: ENST00000261303.12

PSMC1-201, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC1, Length 4,448 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-201ENST00000261303 WIZO95785 1651 aa19.16■□□□□ 0.66
PSMC1-201ENST00000261303 NEFMP07197 916 aa19.16■□□□□ 0.66
PSMC1-201ENST00000261303 FHAD1B1AJZ9 1412 aa19.16■□□□□ 0.66
PSMC1-201ENST00000261303 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
PSMC1-201ENST00000261303 VPS8Q8N3P4 1428 aa19.15■□□□□ 0.66
PSMC1-201ENST00000261303 TMC1Q8TDI8 760 aa19.15■□□□□ 0.66
PSMC1-201ENST00000261303 CCNB3Q8WWL7 1395 aa19.14■□□□□ 0.66
PSMC1-201ENST00000261303 MRS2Q9HD23 443 aa19.13■□□□□ 0.65
PSMC1-201ENST00000261303 CFDP1Q9UEE9 299 aaPredicted RBP19.13■□□□□ 0.65
PSMC1-201ENST00000261303 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
PSMC1-201ENST00000261303 ESF1Q9H501 851 aaKnown RBP19.1■□□□□ 0.65
PSMC1-201ENST00000261303 ZBTB47Q9UFB7 747 aaPredicted RBP19.08■□□□□ 0.64
PSMC1-201ENST00000261303 KCNH8Q96L42 1107 aa19.07■□□□□ 0.64
PSMC1-201ENST00000261303 STAG3Q9UJ98 1225 aa19.07■□□□□ 0.64
PSMC1-201ENST00000261303 SIN3AQ96ST3 1273 aa19.05■□□□□ 0.64
PSMC1-201ENST00000261303 SALL2Q9Y467 1007 aaPredicted RBP19.04■□□□□ 0.64
PSMC1-201ENST00000261303 ANP32AP39687 249 aaKnown RBP19.01■□□□□ 0.63
PSMC1-201ENST00000261303 KANK4Q5T7N3 995 aaPredicted RBP19.01■□□□□ 0.63
PSMC1-201ENST00000261303 ATAD2BQ9ULI0 1458 aa18.99■□□□□ 0.63
PSMC1-201ENST00000261303 ERCC6Q03468 1493 aa18.97■□□□□ 0.63
PSMC1-201ENST00000261303 RGL3Q3MIN7 710 aa18.96■□□□□ 0.63
PSMC1-201ENST00000261303 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
PSMC1-201ENST00000261303 TIMELESSQ9UNS1 1208 aa18.95■□□□□ 0.62
PSMC1-201ENST00000261303 SLC24A1O60721 1099 aa18.94■□□□□ 0.62
PSMC1-201ENST00000261303 CADPSQ9ULU8 1353 aa18.94■□□□□ 0.62
PSMC1-201ENST00000261303 CCDC136Q96JN2 1154 aa18.93■□□□□ 0.62
PSMC1-201ENST00000261303 WDR43Q15061 677 aaKnown RBP eCLIP18.93■□□□□ 0.62
PSMC1-201ENST00000261303 PDS5BQ9NTI5 1447 aa18.92■□□□□ 0.62
PSMC1-201ENST00000261303 TDRD9Q8NDG6 1382 aaKnown RBP18.91■□□□□ 0.62
PSMC1-201ENST00000261303 BCL11AQ9H165 835 aa18.9■□□□□ 0.62
PSMC1-201ENST00000261303 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
PSMC1-201ENST00000261303 SETD5Q9C0A6 1442 aa18.89■□□□□ 0.61
PSMC1-201ENST00000261303 NPM2Q86SE8 214 aaKnown RBP18.89■□□□□ 0.61
PSMC1-201ENST00000261303 CARD11Q9BXL7 1154 aa18.86■□□□□ 0.61
PSMC1-201ENST00000261303 ARHGAP35Q9NRY4 1499 aa18.85■□□□□ 0.61
PSMC1-201ENST00000261303 RAPGEF2Q9Y4G8 1499 aa18.85■□□□□ 0.61
PSMC1-201ENST00000261303 IRX6P78412 446 aaPredicted RBP18.85■□□□□ 0.61
PSMC1-201ENST00000261303 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.85■□□□□ 0.61
PSMC1-201ENST00000261303 FMN1Q68DA7 1419 aa18.84■□□□□ 0.61
PSMC1-201ENST00000261303 RUSC2Q8N2Y8 1516 aa18.83■□□□□ 0.6
PSMC1-201ENST00000261303 RAB3GAP2Q9H2M9 1393 aa18.79■□□□□ 0.6
PSMC1-201ENST00000261303 CDCA8Q53HL2 280 aa18.78■□□□□ 0.6
PSMC1-201ENST00000261303 PLPPR3Q6T4P5 718 aa18.78■□□□□ 0.6
PSMC1-201ENST00000261303 KNSTRNQ9Y448 316 aa18.72■□□□□ 0.59
PSMC1-201ENST00000261303 CARMIL2Q6F5E8 1435 aa18.72■□□□□ 0.59
PSMC1-201ENST00000261303 UPF2Q9HAU5 1272 aaKnown RBP18.71■□□□□ 0.59
PSMC1-201ENST00000261303 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
PSMC1-201ENST00000261303 FHOD3Q2V2M9 1422 aa18.71■□□□□ 0.59
PSMC1-201ENST00000261303 DCAF11Q8TEB1 546 aa18.68■□□□□ 0.58
PSMC1-201ENST00000261303 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
PSMC1-201ENST00000261303 SENP3-EIF4A1A0A087X0R7 540 aa18.66■□□□□ 0.58
PSMC1-201ENST00000261303 PPP1R15AO75807 674 aaPredicted RBP18.66■□□□□ 0.58
PSMC1-201ENST00000261303 PKD2Q13563 968 aa18.65■□□□□ 0.58
PSMC1-201ENST00000261303 CCER2I3L3R5 266 aa18.65■□□□□ 0.58
PSMC1-201ENST00000261303 MPHOSPH9Q99550 1183 aa18.64■□□□□ 0.57
PSMC1-201ENST00000261303 HSPA5P11021 654 aaKnown RBP18.64■□□□□ 0.57
PSMC1-201ENST00000261303 FOXD1Q16676 465 aa18.63■□□□□ 0.57
PSMC1-201ENST00000261303 FANCD2Q9BXW9 1451 aa18.63■□□□□ 0.57
PSMC1-201ENST00000261303 CFAP53Q96M91 514 aa18.61■□□□□ 0.57
PSMC1-201ENST00000261303 HSP90AA1P07900 732 aaKnown RBP18.58■□□□□ 0.57
PSMC1-201ENST00000261303 IGF1RP08069 1367 aa18.57■□□□□ 0.56
PSMC1-201ENST00000261303 TMF1P82094 1093 aa18.57■□□□□ 0.56
PSMC1-201ENST00000261303 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
PSMC1-201ENST00000261303 ANKRD30AQ9BXX3 1397 aa18.56■□□□□ 0.56
PSMC1-201ENST00000261303 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
PSMC1-201ENST00000261303 NUP155O75694 1391 aa18.55■□□□□ 0.56
PSMC1-201ENST00000261303 KANK1Q14678 1352 aa18.54■□□□□ 0.56
PSMC1-201ENST00000261303 JPH4Q96JJ6 628 aa18.54■□□□□ 0.56
PSMC1-201ENST00000261303 PPP4R2Q9NY27 417 aa18.54■□□□□ 0.56
PSMC1-201ENST00000261303 EFCAB2Q5VUJ9 269 aa18.53■□□□□ 0.56
PSMC1-201ENST00000261303 CC2D1BQ5T0F9 858 aaKnown RBP18.53■□□□□ 0.56
PSMC1-201ENST00000261303 CCDC18Q5T9S5 1454 aa18.51■□□□□ 0.55
PSMC1-201ENST00000261303 L3MBTL2Q969R5 705 aa18.51■□□□□ 0.55
PSMC1-201ENST00000261303 FGD5Q6ZNL6 1462 aa18.5■□□□□ 0.55
PSMC1-201ENST00000261303 POGKQ9P215 609 aa18.48■□□□□ 0.55
PSMC1-201ENST00000261303 ARID4BQ4LE39 1312 aaPredicted RBP18.48■□□□□ 0.55
PSMC1-201ENST00000261303 NBR1Q14596 966 aa18.48■□□□□ 0.55
PSMC1-201ENST00000261303 NEUROD2Q15784 382 aa18.47■□□□□ 0.55
PSMC1-201ENST00000261303 RSPH4AQ5TD94 716 aa18.46■□□□□ 0.54
PSMC1-201ENST00000261303 MYH16Q9H6N6 1097 aa18.45■□□□□ 0.54
PSMC1-201ENST00000261303 PPM1GO15355 546 aaPredicted RBP18.45■□□□□ 0.54
PSMC1-201ENST00000261303 NUDCQ9Y266 331 aa18.45■□□□□ 0.54
PSMC1-201ENST00000261303 HNRNPMP52272 730 aaKnown RBP eCLIP18.43■□□□□ 0.54
PSMC1-201ENST00000261303 TNNT2P45379 298 aaPredicted RBP18.42■□□□□ 0.54
PSMC1-201ENST00000261303 GGT6Q6P531 493 aa18.42■□□□□ 0.54
PSMC1-201ENST00000261303 MAPK8IP3Q9UPT6 1336 aa18.41■□□□□ 0.54
PSMC1-201ENST00000261303 GAPVD1Q14C86 1478 aa18.4■□□□□ 0.54
PSMC1-201ENST00000261303 RAD54L2Q9Y4B4 1467 aa18.4■□□□□ 0.54
PSMC1-201ENST00000261303 B4GALNT3Q6L9W6 998 aa18.4■□□□□ 0.54
PSMC1-201ENST00000261303 C14orf37Q86TY3 774 aa18.4■□□□□ 0.54
PSMC1-201ENST00000261303 ROCK2O75116 1388 aaKnown RBP18.38■□□□□ 0.53
PSMC1-201ENST00000261303 KIF21BO75037 1637 aa18.38■□□□□ 0.53
PSMC1-201ENST00000261303 ANP32BQ92688 251 aaKnown RBP18.37■□□□□ 0.53
PSMC1-201ENST00000261303 DDRGK1Q96HY6 314 aa18.37■□□□□ 0.53
PSMC1-201ENST00000261303 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
PSMC1-201ENST00000261303 FTSJ3Q8IY81 847 aaKnown RBP18.36■□□□□ 0.53
PSMC1-201ENST00000261303 RALBP1Q15311 655 aa18.34■□□□□ 0.53
PSMC1-201ENST00000261303 CFTRP13569 1480 aa18.34■□□□□ 0.53
PSMC1-201ENST00000261303 U2SURPO15042 1029 aaKnown RBP18.33■□□□□ 0.53
PSMC1-201ENST00000261303 KIF3BO15066 747 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms