RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 NBR1Q14596 966 aa21.18■□□□□ 0.98
SHTN1-201ENST00000260777 KDM2AQ9Y2K7 1162 aa21.15■□□□□ 0.98
SHTN1-201ENST00000260777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.15■□□□□ 0.989e-7■□□□□ 10.6
SHTN1-201ENST00000260777 RRP7BPQ9NSQ0 103 aa21.14■□□□□ 0.98
SHTN1-201ENST00000260777 KIF27Q86VH2 1401 aa21.14■□□□□ 0.97
SHTN1-201ENST00000260777 EIF5BO60841 1220 aaKnown RBP21.12■□□□□ 0.97
SHTN1-201ENST00000260777 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
SHTN1-201ENST00000260777 BAZ1AQ9NRL2 1556 aaPredicted RBP21.07■□□□□ 0.96
SHTN1-201ENST00000260777 STAG3Q9UJ98 1225 aa21.07■□□□□ 0.96
SHTN1-201ENST00000260777 ESF1Q9H501 851 aaKnown RBP21.04■□□□□ 0.96
SHTN1-201ENST00000260777 DDRGK1Q96HY6 314 aa21.03■□□□□ 0.96
SHTN1-201ENST00000260777 ANP32EQ9BTT0 268 aa21.03■□□□□ 0.96
SHTN1-201ENST00000260777 NPM1P06748 294 aaKnown RBP eCLIP21.01■□□□□ 0.95
SHTN1-201ENST00000260777 CHMP7Q8WUX9 453 aaPredicted RBP21■□□□□ 0.95
SHTN1-201ENST00000260777 SUPT16HQ9Y5B9 1047 aaKnown RBP20.98■□□□□ 0.95
SHTN1-201ENST00000260777 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.95
SHTN1-201ENST00000260777 GLIPR1L2Q4G1C9 344 aa20.94■□□□□ 0.94
SHTN1-201ENST00000260777 TIMELESSQ9UNS1 1208 aa20.93■□□□□ 0.94
SHTN1-201ENST00000260777 PPP4R2Q9NY27 417 aa20.92■□□□□ 0.94
SHTN1-201ENST00000260777 SIN3AQ96ST3 1273 aa20.92■□□□□ 0.94
SHTN1-201ENST00000260777 PLEKHD1A6NEE1 506 aa20.92■□□□□ 0.94
SHTN1-201ENST00000260777 BECN1Q14457 450 aa20.92■□□□□ 0.94
SHTN1-201ENST00000260777 CECR2Q9BXF3 1484 aa20.91■□□□□ 0.94
SHTN1-201ENST00000260777 FHAD1B1AJZ9 1412 aa20.9■□□□□ 0.94
SHTN1-201ENST00000260777 SOGA1O94964 1423 aa20.89■□□□□ 0.94
SHTN1-201ENST00000260777 CDCA8Q53HL2 280 aa20.88■□□□□ 0.93
SHTN1-201ENST00000260777 MYH16Q9H6N6 1097 aa20.87■□□□□ 0.93
SHTN1-201ENST00000260777 CFDP1Q9UEE9 299 aaPredicted RBP20.87■□□□□ 0.93
SHTN1-201ENST00000260777 CARD11Q9BXL7 1154 aa20.86■□□□□ 0.93
SHTN1-201ENST00000260777 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
SHTN1-201ENST00000260777 CCER2I3L3R5 266 aa20.83■□□□□ 0.93
SHTN1-201ENST00000260777 KNSTRNQ9Y448 316 aa20.82■□□□□ 0.92
SHTN1-201ENST00000260777 ARXQ96QS3 562 aa20.81■□□□□ 0.92
SHTN1-201ENST00000260777 PPM1GO15355 546 aaPredicted RBP20.81■□□□□ 0.92
SHTN1-201ENST00000260777 RGL3Q3MIN7 710 aa20.81■□□□□ 0.92
SHTN1-201ENST00000260777 CFAP53Q96M91 514 aa20.78■□□□□ 0.92
SHTN1-201ENST00000260777 SETD5Q9C0A6 1442 aa20.77■□□□□ 0.92
SHTN1-201ENST00000260777 CARMIL1Q5VZK9 1371 aa20.74■□□□□ 0.91
SHTN1-201ENST00000260777 NOP58Q9Y2X3 529 aaKnown RBP20.73■□□□□ 0.91
SHTN1-201ENST00000260777 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
SHTN1-201ENST00000260777 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
SHTN1-201ENST00000260777 KCNH8Q96L42 1107 aa20.71■□□□□ 0.91
SHTN1-201ENST00000260777 GOLGA6L22H0YM25 854 aa20.69■□□□□ 0.9
SHTN1-201ENST00000260777 CUX2O14529 1486 aa20.69■□□□□ 0.9
SHTN1-201ENST00000260777 SENP3-EIF4A1A0A087X0R7 540 aa20.68■□□□□ 0.9
SHTN1-201ENST00000260777 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
SHTN1-201ENST00000260777 ARHGAP35Q9NRY4 1499 aa20.67■□□□□ 0.9
SHTN1-201ENST00000260777 TRIM44Q96DX7 344 aaPredicted RBP20.67■□□□□ 0.9
SHTN1-201ENST00000260777 B4GALNT3Q6L9W6 998 aa20.64■□□□□ 0.9
SHTN1-201ENST00000260777 FTSJ3Q8IY81 847 aaKnown RBP20.63■□□□□ 0.89
SHTN1-201ENST00000260777 ERICH6BQ5W0A0 696 aa20.62■□□□□ 0.89
SHTN1-201ENST00000260777 NCLP19338 710 aaKnown RBP20.62■□□□□ 0.89
SHTN1-201ENST00000260777 KANK4Q5T7N3 995 aaPredicted RBP20.62■□□□□ 0.89
SHTN1-201ENST00000260777 HSPA5P11021 654 aaKnown RBP20.6■□□□□ 0.89
SHTN1-201ENST00000260777 LAS1LQ9Y4W2 734 aaKnown RBP20.58■□□□□ 0.89
SHTN1-201ENST00000260777 RAB3GAP2Q9H2M9 1393 aa20.58■□□□□ 0.89
SHTN1-201ENST00000260777 PPP1R15AO75807 674 aaPredicted RBP20.58■□□□□ 0.88
SHTN1-201ENST00000260777 RBM19Q9Y4C8 960 aaKnown RBP20.58■□□□□ 0.88
SHTN1-201ENST00000260777 PLPPR3Q6T4P5 718 aa20.57■□□□□ 0.88
SHTN1-201ENST00000260777 TMF1P82094 1093 aa20.57■□□□□ 0.88
SHTN1-201ENST00000260777 CC2D1BQ5T0F9 858 aaKnown RBP20.57■□□□□ 0.88
SHTN1-201ENST00000260777 NUDCQ9Y266 331 aa20.57■□□□□ 0.88
SHTN1-201ENST00000260777 RGS3P49796 1198 aa20.56■□□□□ 0.88
SHTN1-201ENST00000260777 MAPK8IP3Q9UPT6 1336 aa20.56■□□□□ 0.88
SHTN1-201ENST00000260777 CASC1Q6TDU7 716 aa20.56■□□□□ 0.88
SHTN1-201ENST00000260777 MS4A1P11836 297 aa20.55■□□□□ 0.88
SHTN1-201ENST00000260777 DCAF11Q8TEB1 546 aa20.54■□□□□ 0.88
SHTN1-201ENST00000260777 EIF4G1Q04637 1599 aaKnown RBP20.53■□□□□ 0.88
SHTN1-201ENST00000260777 NEUROD2Q15784 382 aa20.53■□□□□ 0.88
SHTN1-201ENST00000260777 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
SHTN1-201ENST00000260777 CHMP4BQ9H444 224 aaKnown RBP20.52■□□□□ 0.88
SHTN1-201ENST00000260777 SMARCA2P51531 1590 aa20.5■□□□□ 0.87
SHTN1-201ENST00000260777 FRAT1Q92837 279 aaPredicted RBP20.5■□□□□ 0.87
SHTN1-201ENST00000260777 FMN1Q68DA7 1419 aa20.47■□□□□ 0.87
SHTN1-201ENST00000260777 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
SHTN1-201ENST00000260777 KTN1Q86UP2 1357 aaKnown RBP20.44■□□□□ 0.86
SHTN1-201ENST00000260777 WIZO95785 1651 aa20.44■□□□□ 0.86
SHTN1-201ENST00000260777 PNNQ9H307 717 aaKnown RBP20.44■□□□□ 0.86
SHTN1-201ENST00000260777 PTMAP06454 111 aaKnown RBP20.41■□□□□ 0.86
SHTN1-201ENST00000260777 MPHOSPH9Q99550 1183 aa20.41■□□□□ 0.86
SHTN1-201ENST00000260777 PKD2Q13563 968 aa20.41■□□□□ 0.86
SHTN1-201ENST00000260777 KANK1Q14678 1352 aa20.4■□□□□ 0.86
SHTN1-201ENST00000260777 RALBP1Q15311 655 aa20.4■□□□□ 0.86
SHTN1-201ENST00000260777 POGKQ9P215 609 aa20.4■□□□□ 0.86
SHTN1-201ENST00000260777 DEKP35659 375 aaKnown RBP20.4■□□□□ 0.86
SHTN1-201ENST00000260777 TSHZ2Q9NRE2 1034 aa20.4■□□□□ 0.86
SHTN1-201ENST00000260777 TNNT2P45379 298 aaPredicted RBP20.39■□□□□ 0.85
SHTN1-201ENST00000260777 C14orf37Q86TY3 774 aa20.39■□□□□ 0.85
SHTN1-201ENST00000260777 HSP90AB1P08238 724 aaKnown RBP20.38■□□□□ 0.85
SHTN1-201ENST00000260777 ZBTB7CA1YPR0 619 aa20.36■□□□□ 0.85
SHTN1-201ENST00000260777 U2SURPO15042 1029 aaKnown RBP20.36■□□□□ 0.85
SHTN1-201ENST00000260777 RCAN3Q9UKA8 241 aa20.35■□□□□ 0.85
SHTN1-201ENST00000260777 ERCC6Q03468 1493 aa20.35■□□□□ 0.85
SHTN1-201ENST00000260777 FOXD1Q16676 465 aa20.35■□□□□ 0.85
SHTN1-201ENST00000260777 TCERG1O14776 1098 aaKnown RBP20.34■□□□□ 0.85
SHTN1-201ENST00000260777 HSCBQ8IWL3 235 aa20.34■□□□□ 0.85
SHTN1-201ENST00000260777 RTN4Q9NQC3 1192 aaKnown RBP20.34■□□□□ 0.85
SHTN1-201ENST00000260777 DHX57Q6P158 1386 aaKnown RBP20.33■□□□□ 0.84
SHTN1-201ENST00000260777 NAP1L5Q96NT1 182 aaPredicted RBP20.32■□□□□ 0.84
SHTN1-201ENST00000260777 L1TD1Q5T7N2 865 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms