RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 RUSC2Q8N2Y8 1516 aa22.65■■□□□ 1.22
CSHL1-201ENST00000259003 ADCY10Q96PN6 1610 aa22.55■■□□□ 1.2
CSHL1-201ENST00000259003 TSPOAP1O95153 1857 aa22.51■■□□□ 1.19
CSHL1-201ENST00000259003 IGF1RP08069 1367 aa22.49■■□□□ 1.19
CSHL1-201ENST00000259003 FAM69CQ0P6D2 419 aa22.48■■□□□ 1.19
CSHL1-201ENST00000259003 DIP2BQ9P265 1576 aa22.47■■□□□ 1.19
CSHL1-201ENST00000259003 ABCC10Q5T3U5 1492 aa22.47■■□□□ 1.19
CSHL1-201ENST00000259003 MAPKBP1O60336 1514 aa22.43■■□□□ 1.18
CSHL1-201ENST00000259003 KIAA0586Q9BVV6 1533 aa22.43■■□□□ 1.18
CSHL1-201ENST00000259003 CUL7Q14999 1698 aa22.42■■□□□ 1.18
CSHL1-201ENST00000259003 NPM1P06748 294 aaKnown RBP eCLIP22.39■■□□□ 1.17
CSHL1-201ENST00000259003 KIF27Q86VH2 1401 aa22.39■■□□□ 1.17
CSHL1-201ENST00000259003 TTBK1Q5TCY1 1321 aaPredicted RBP22.36■■□□□ 1.17
CSHL1-201ENST00000259003 CARMIL1Q5VZK9 1371 aa22.31■■□□□ 1.16
CSHL1-201ENST00000259003 KDM6BO15054 1643 aa22.31■■□□□ 1.16
CSHL1-201ENST00000259003 PTPRGP23470 1445 aa22.28■■□□□ 1.16
CSHL1-201ENST00000259003 PPRC1Q5VV67 1664 aaKnown RBP22.25■■□□□ 1.15
CSHL1-201ENST00000259003 KDM4FA0A1W2PPD8 638 aa22.24■■□□□ 1.15
CSHL1-201ENST00000259003 IQGAP2Q13576 1575 aa22.24■■□□□ 1.15
CSHL1-201ENST00000259003 TNIKQ9UKE5 1360 aa22.2■■□□□ 1.14
CSHL1-201ENST00000259003 ABCC2Q92887 1545 aa22.19■■□□□ 1.14
CSHL1-201ENST00000259003 DISP1Q96F81 1524 aa22.18■■□□□ 1.14
CSHL1-201ENST00000259003 ASXL2Q76L83 1435 aa22.17■■□□□ 1.14
CSHL1-201ENST00000259003 CARMIL2Q6F5E8 1435 aa22.15■■□□□ 1.14
CSHL1-201ENST00000259003 GLI2P10070 1586 aa22.11■■□□□ 1.13
CSHL1-201ENST00000259003 UHRF1BP1LA0JNW5 1464 aa22.1■■□□□ 1.13
CSHL1-201ENST00000259003 UACAQ9BZF9 1416 aa22.1■■□□□ 1.13
CSHL1-201ENST00000259003 ZCCHC11Q5TAX3 1644 aaKnown RBP22.09■■□□□ 1.13
CSHL1-201ENST00000259003 COL17A1Q9UMD9 1497 aaPredicted RBP22.09■■□□□ 1.13
CSHL1-201ENST00000259003 PLB1Q6P1J6 1458 aa22.08■■□□□ 1.12
CSHL1-201ENST00000259003 UGGT2Q9NYU1 1516 aa22.06■■□□□ 1.12
CSHL1-201ENST00000259003 KIAA0556O60303 1618 aa22.06■■□□□ 1.12
CSHL1-201ENST00000259003 RAPGEF2Q9Y4G8 1499 aa22.06■■□□□ 1.12
CSHL1-201ENST00000259003 MAP3K4Q9Y6R4 1608 aa22.06■■□□□ 1.12
CSHL1-201ENST00000259003 EPRSP07814 1512 aaKnown RBP22.04■■□□□ 1.12
CSHL1-201ENST00000259003 KDM5BQ9UGL1 1544 aa22.04■■□□□ 1.12
CSHL1-201ENST00000259003 CTTNBP2Q8WZ74 1663 aa22.01■■□□□ 1.11
CSHL1-201ENST00000259003 ADGRL1O94910 1474 aa21.96■■□□□ 1.11
CSHL1-201ENST00000259003 WDR7Q9Y4E6 1490 aa21.89■■□□□ 1.09
CSHL1-201ENST00000259003 ABCA8O94911 1581 aa21.87■■□□□ 1.09
CSHL1-201ENST00000259003 TEX14Q8IWB6 1497 aa21.86■■□□□ 1.09
CSHL1-201ENST00000259003 KCNH8Q96L42 1107 aa21.84■■□□□ 1.09
CSHL1-201ENST00000259003 CFAP43Q8NDM7 1665 aa21.82■■□□□ 1.08
CSHL1-201ENST00000259003 PRXQ9BXM0 1461 aa21.8■■□□□ 1.08
CSHL1-201ENST00000259003 ARID3CA6NKF2 412 aa21.8■■□□□ 1.08
CSHL1-201ENST00000259003 ILDR1Q86SU0 546 aaPredicted RBP21.78■■□□□ 1.08
CSHL1-201ENST00000259003 CD109Q6YHK3 1445 aa21.78■■□□□ 1.08
CSHL1-201ENST00000259003 HECW2Q9P2P5 1572 aa21.78■■□□□ 1.08
CSHL1-201ENST00000259003 GOLGA3Q08378 1498 aa21.77■■□□□ 1.08
CSHL1-201ENST00000259003 P3H3Q8IVL6 736 aa21.77■■□□□ 1.08
CSHL1-201ENST00000259003 MAGI3Q5TCQ9 1506 aa21.75■■□□□ 1.07
CSHL1-201ENST00000259003 KIF21BO75037 1637 aa21.75■■□□□ 1.07
CSHL1-201ENST00000259003 ATP10BO94823 1461 aa21.7■■□□□ 1.06
CSHL1-201ENST00000259003 SAMD9Q5K651 1589 aa21.63■■□□□ 1.05
CSHL1-201ENST00000259003 ABCA9Q8IUA7 1624 aa21.62■■□□□ 1.05
CSHL1-201ENST00000259003 RAPGEF6Q8TEU7 1601 aa21.6■■□□□ 1.05
CSHL1-201ENST00000259003 ARAP3Q8WWN8 1544 aa21.6■■□□□ 1.05
CSHL1-201ENST00000259003 RANGAP1P46060 587 aaPredicted RBP21.57■■□□□ 1.04
CSHL1-201ENST00000259003 CSRNP3Q8WYN3 585 aa21.56■■□□□ 1.04
CSHL1-201ENST00000259003 RAPGEF3O95398 923 aa21.55■■□□□ 1.04
CSHL1-201ENST00000259003 FRMPD1Q5SYB0 1578 aa21.54■■□□□ 1.04
CSHL1-201ENST00000259003 ADAMTSL3P82987 1691 aa21.53■■□□□ 1.04
CSHL1-201ENST00000259003 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.03
CSHL1-201ENST00000259003 FHOD3Q2V2M9 1422 aa21.51■■□□□ 1.03
CSHL1-201ENST00000259003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.49■■□□□ 1.03
CSHL1-201ENST00000259003 HNRNPUL2Q1KMD3 747 aaKnown RBP21.49■■□□□ 1.03
CSHL1-201ENST00000259003 BCORL1Q5H9F3 1711 aa21.47■■□□□ 1.03
CSHL1-201ENST00000259003 FAM9AQ8IZU1 332 aaPredicted RBP21.46■■□□□ 1.03
CSHL1-201ENST00000259003 PTPRMP28827 1452 aa21.45■■□□□ 1.03
CSHL1-201ENST00000259003 MADDQ8WXG6 1647 aa21.44■■□□□ 1.02
CSHL1-201ENST00000259003 RICTORQ6R327 1708 aa21.44■■□□□ 1.02
CSHL1-201ENST00000259003 NEO1Q92859 1461 aa21.44■■□□□ 1.02
CSHL1-201ENST00000259003 SIGLEC1Q9BZZ2 1709 aa21.43■■□□□ 1.02
CSHL1-201ENST00000259003 PHLDB1Q86UU1 1377 aa21.4■■□□□ 1.02
CSHL1-201ENST00000259003 RIMS1Q86UR5 1692 aaKnown RBP21.39■■□□□ 1.01
CSHL1-201ENST00000259003 TTC37Q6PGP7 1564 aa21.39■■□□□ 1.01
CSHL1-201ENST00000259003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.38■■□□□ 1.01
CSHL1-201ENST00000259003 CDK13Q14004 1512 aaKnown RBP21.35■■□□□ 1.01
CSHL1-201ENST00000259003 ARHGEF40Q8TER5 1519 aa21.35■■□□□ 1.01
CSHL1-201ENST00000259003 ARID4BQ4LE39 1312 aaPredicted RBP21.35■■□□□ 1.01
CSHL1-201ENST00000259003 EHMT2Q96KQ7 1210 aa21.34■■□□□ 1.01
CSHL1-201ENST00000259003 AKNAQ7Z591 1439 aa21.33■■□□□ 1.01
CSHL1-201ENST00000259003 PLEKHD1A6NEE1 506 aa21.33■■□□□ 1.01
CSHL1-201ENST00000259003 DENND4BO75064 1496 aaPredicted RBP21.32■■□□□ 1
CSHL1-201ENST00000259003 EEA1Q15075 1411 aa21.31■■□□□ 1
CSHL1-201ENST00000259003 FANCAO15360 1455 aa21.31■■□□□ 1
CSHL1-201ENST00000259003 PCF11O94913 1555 aaKnown RBP21.29■■□□□ 1
CSHL1-201ENST00000259003 LMTK3Q96Q04 1460 aa21.29■■□□□ 1
CSHL1-201ENST00000259003 PLPPR3Q6T4P5 718 aa21.29■■□□□ 1
CSHL1-201ENST00000259003 YEATS2Q9ULM3 1422 aa21.29■■□□□ 1
CSHL1-201ENST00000259003 CFAP74Q9C0B2 1584 aa21.27■■□□□ 1
CSHL1-201ENST00000259003 EFCAB5A4FU69 1503 aa21.27■■□□□ 1
CSHL1-201ENST00000259003 HECW1Q76N89 1606 aa21.25■□□□□ 0.99
CSHL1-201ENST00000259003 ZMYM4Q5VZL5 1548 aa21.24■□□□□ 0.99
CSHL1-201ENST00000259003 LRRIQ1Q96JM4 1722 aa21.23■□□□□ 0.99
CSHL1-201ENST00000259003 HSPA2P54652 639 aa21.22■□□□□ 0.99
CSHL1-201ENST00000259003 ZFYVE16Q7Z3T8 1539 aa21.22■□□□□ 0.99
CSHL1-201ENST00000259003 FER1L4A9Z1Z3 1794 aa21.22■□□□□ 0.99
CSHL1-201ENST00000259003 FBXO41Q8TF61 875 aa21.21■□□□□ 0.99
CSHL1-201ENST00000259003 KIF14Q15058 1648 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms