RNA–Protein interactions for RNA: ENST00000256509.6

CHL1-201, Transcript of cell adhesion molecule L1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHL1, Length 8,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-201ENST00000256509 NBR1Q14596 966 aa16.46■□□□□ 0.22
CHL1-201ENST00000256509 NAP1L2Q9ULW6 460 aaPredicted RBP16.45■□□□□ 0.22
CHL1-201ENST00000256509 ANO8Q9HCE9 1232 aaPredicted RBP16.44■□□□□ 0.22
CHL1-201ENST00000256509 WDR43Q15061 677 aaKnown RBP eCLIP16.42■□□□□ 0.22
CHL1-201ENST00000256509 TMC1Q8TDI8 760 aa16.41■□□□□ 0.22
CHL1-201ENST00000256509 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.4■□□□□ 0.22
CHL1-201ENST00000256509 NCLP19338 710 aaKnown RBP16.38■□□□□ 0.21
CHL1-201ENST00000256509 LAS1LQ9Y4W2 734 aaKnown RBP16.37■□□□□ 0.21
CHL1-201ENST00000256509 GTF3C3Q9Y5Q9 886 aa16.37■□□□□ 0.21
CHL1-201ENST00000256509 PDE4CQ08493 712 aa16.36■□□□□ 0.21
CHL1-201ENST00000256509 SENP3-EIF4A1A0A087X0R7 540 aa16.35■□□□□ 0.21
CHL1-201ENST00000256509 TRIM44Q96DX7 344 aaPredicted RBP16.35■□□□□ 0.21
CHL1-201ENST00000256509 KCNH8Q96L42 1107 aa16.34■□□□□ 0.21
CHL1-201ENST00000256509 FBXO3Q9UK99 471 aa16.34■□□□□ 0.21
CHL1-201ENST00000256509 CHIC2Q9UKJ5 165 aa16.33■□□□□ 0.21
CHL1-201ENST00000256509 PLCB2Q00722 1185 aa16.31■□□□□ 0.2
CHL1-201ENST00000256509 SOX12O15370 315 aa16.31■□□□□ 0.2
CHL1-201ENST00000256509 ABCC9O60706 1549 aa16.3■□□□□ 0.2
CHL1-201ENST00000256509 FGD1P98174 961 aa16.29■□□□□ 0.2
CHL1-201ENST00000256509 HNRNPUQ00839 825 aaKnown RBP eCLIP16.28■□□□□ 0.2
CHL1-201ENST00000256509 DNTTIP2Q5QJE6 756 aaKnown RBP16.28■□□□□ 0.2
CHL1-201ENST00000256509 CCDC9Q9Y3X0 531 aaKnown RBP16.28■□□□□ 0.2
CHL1-201ENST00000256509 PTMAP06454 111 aaKnown RBP16.25■□□□□ 0.19
CHL1-201ENST00000256509 OS9Q13438 667 aaPredicted RBP16.25■□□□□ 0.19
CHL1-201ENST00000256509 FKBP8Q14318 412 aa16.24■□□□□ 0.19
CHL1-201ENST00000256509 ZNF330Q9Y3S2 320 aaPredicted RBP16.23■□□□□ 0.19
CHL1-201ENST00000256509 CCDC136Q96JN2 1154 aa16.22■□□□□ 0.19
CHL1-201ENST00000256509 MLECQ14165 292 aa16.19■□□□□ 0.18
CHL1-201ENST00000256509 KCNJ4P48050 445 aa16.18■□□□□ 0.18
CHL1-201ENST00000256509 IRX6P78412 446 aaPredicted RBP16.18■□□□□ 0.18
CHL1-201ENST00000256509 TMX4Q9H1E5 349 aaPredicted RBP16.18■□□□□ 0.18
CHL1-201ENST00000256509 PHF23Q9BUL5 403 aaPredicted RBP16.17■□□□□ 0.18
CHL1-201ENST00000256509 WWC1Q8IX03 1113 aa16.16■□□□□ 0.18
CHL1-201ENST00000256509 AEBP2Q6ZN18 517 aaPredicted RBP16.16■□□□□ 0.18
CHL1-201ENST00000256509 G3V3G9 751 aa16.16■□□□□ 0.18
CHL1-201ENST00000256509 DCAF8Q5TAQ9 597 aa16.16■□□□□ 0.18
CHL1-201ENST00000256509 NEUROD2Q15784 382 aa16.16■□□□□ 0.18
CHL1-201ENST00000256509 RGL3Q3MIN7 710 aa16.15■□□□□ 0.18
CHL1-201ENST00000256509 ERICH6BQ5W0A0 696 aa16.15■□□□□ 0.18
CHL1-201ENST00000256509 TONSLQ96HA7 1378 aa16.14■□□□□ 0.17
CHL1-201ENST00000256509 DDX10Q13206 875 aaKnown RBP16.13■□□□□ 0.17
CHL1-201ENST00000256509 CASC1Q6TDU7 716 aa16.12■□□□□ 0.17
CHL1-201ENST00000256509 TSPY4P0CV99 314 aa16.11■□□□□ 0.17
CHL1-201ENST00000256509 TSPY10P0CW01 314 aa16.11■□□□□ 0.17
CHL1-201ENST00000256509 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
CHL1-201ENST00000256509 CNKSR2Q8WXI2 1034 aa16.1■□□□□ 0.17
CHL1-201ENST00000256509 HIRIP3Q9BW71 556 aaPredicted RBP16.09■□□□□ 0.17
CHL1-201ENST00000256509 FTSJ3Q8IY81 847 aaKnown RBP16.08■□□□□ 0.17
CHL1-201ENST00000256509 KLHL34Q8N239 644 aa16.08■□□□□ 0.17
CHL1-201ENST00000256509 NOC3LQ8WTT2 800 aaKnown RBP16.06■□□□□ 0.16
CHL1-201ENST00000256509 CALRP27797 417 aaKnown RBP16.06■□□□□ 0.16
CHL1-201ENST00000256509 GOLGA6L22H0YM25 854 aa16.05■□□□□ 0.16
CHL1-201ENST00000256509 POGKQ9P215 609 aa16.05■□□□□ 0.16
CHL1-201ENST00000256509 MSH5O43196 834 aa16.03■□□□□ 0.16
CHL1-201ENST00000256509 PAK3O75914 559 aaPredicted RBP16.03■□□□□ 0.16
CHL1-201ENST00000256509 GNL2Q13823 731 aaKnown RBP16.03■□□□□ 0.16
CHL1-201ENST00000256509 VPS53Q5VIR6 699 aa16.01■□□□□ 0.15
CHL1-201ENST00000256509 PNNQ9H307 717 aaKnown RBP15.98■□□□□ 0.15
CHL1-201ENST00000256509 MRS2Q9HD23 443 aa15.98■□□□□ 0.15
CHL1-201ENST00000256509 CSB-PGBD3P0DP91 1061 aa15.97■□□□□ 0.15
CHL1-201ENST00000256509 BECN1Q14457 450 aa15.97■□□□□ 0.15
CHL1-201ENST00000256509 L1TD1Q5T7N2 865 aaKnown RBP15.96■□□□□ 0.15
CHL1-201ENST00000256509 KIAA2012Q0VF49 1180 aa15.96■□□□□ 0.15
CHL1-201ENST00000256509 EIF4G2P78344 907 aaKnown RBP eCLIP15.96■□□□□ 0.15
CHL1-201ENST00000256509 U2SURPO15042 1029 aaKnown RBP15.96■□□□□ 0.15
CHL1-201ENST00000256509 GOLGA6L6A8MZA4 724 aa15.95■□□□□ 0.14
CHL1-201ENST00000256509 CFAP53Q96M91 514 aa15.94■□□□□ 0.14
CHL1-201ENST00000256509 GOLGA6L4A6NEF3 574 aa15.94■□□□□ 0.14
CHL1-201ENST00000256509 CREBRFQ8IUR6 639 aa15.94■□□□□ 0.14
CHL1-201ENST00000256509 SAFB2Q14151 953 aaKnown RBP eCLIP15.94■□□□□ 0.14
CHL1-201ENST00000256509 ANP32EQ9BTT0 268 aa15.94■□□□□ 0.14
CHL1-201ENST00000256509 DRC7Q8IY82 874 aa15.93■□□□□ 0.14
CHL1-201ENST00000256509 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
CHL1-201ENST00000256509 CHMP3Q9Y3E7 222 aa15.92■□□□□ 0.14
CHL1-201ENST00000256509 FRAT1Q92837 279 aaPredicted RBP15.92■□□□□ 0.14
CHL1-201ENST00000256509 MAPK8IP3Q9UPT6 1336 aa15.92■□□□□ 0.14
CHL1-201ENST00000256509 APBB1O00213 710 aa15.9■□□□□ 0.14
CHL1-201ENST00000256509 A0A0U1RQG5 324 aaPredicted RBP15.9■□□□□ 0.14
CHL1-201ENST00000256509 RRP7BPQ9NSQ0 103 aa15.87■□□□□ 0.13
CHL1-201ENST00000256509 RAD21O60216 631 aa15.87■□□□□ 0.13
CHL1-201ENST00000256509 FRAT2O75474 233 aaPredicted RBP15.87■□□□□ 0.13
CHL1-201ENST00000256509 HSP90AB1P08238 724 aaKnown RBP15.86■□□□□ 0.13
CHL1-201ENST00000256509 GTF2E1P29083 439 aaPredicted RBP15.85■□□□□ 0.13
CHL1-201ENST00000256509 CWC22Q9HCG8 908 aaKnown RBP15.85■□□□□ 0.13
CHL1-201ENST00000256509 NRDCO43847 1150 aa15.84■□□□□ 0.13
CHL1-201ENST00000256509 MEX3CQ5U5Q3 659 aaKnown RBP15.84■□□□□ 0.13
CHL1-201ENST00000256509 KNSTRNQ9Y448 316 aa15.84■□□□□ 0.13
CHL1-201ENST00000256509 SPRYD3Q8NCJ5 442 aa15.84■□□□□ 0.13
CHL1-201ENST00000256509 TAF7LQ5H9L4 462 aa15.84■□□□□ 0.13
CHL1-201ENST00000256509 CHAF1AQ13111 956 aaPredicted RBP15.83■□□□□ 0.13
CHL1-201ENST00000256509 GORABQ5T7V8 394 aa15.81■□□□□ 0.12
CHL1-201ENST00000256509 NAP1L5Q96NT1 182 aaPredicted RBP15.81■□□□□ 0.12
CHL1-201ENST00000256509 RGS3P49796 1198 aa15.81■□□□□ 0.12
CHL1-201ENST00000256509 RASSF8Q8NHQ8 419 aa15.8■□□□□ 0.12
CHL1-201ENST00000256509 STK26Q9P289 416 aa15.8■□□□□ 0.12
CHL1-201ENST00000256509 SAMD1Q6SPF0 538 aaPredicted RBP15.8■□□□□ 0.12
CHL1-201ENST00000256509 ARID3AQ99856 593 aa15.78■□□□□ 0.12
CHL1-201ENST00000256509 MARCH6O60337 910 aa15.78■□□□□ 0.12
CHL1-201ENST00000256509 RTF1Q92541 710 aaKnown RBP15.78■□□□□ 0.12
CHL1-201ENST00000256509 SRPK2P78362 688 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms