RNA–Protein interactions for RNA: ENST00000254605.10

RRP8-201, Transcript of ribosomal RNA processing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP8, Length 6,560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-201ENST00000254605 HNRNPUQ00839 825 aaKnown RBP eCLIP11.68□□□□□ -0.54
RRP8-201ENST00000254605 TRHP20396 242 aaPredicted RBP11.67□□□□□ -0.54
RRP8-201ENST00000254605 TMC1Q8TDI8 760 aa11.67□□□□□ -0.54
RRP8-201ENST00000254605 WDR43Q15061 677 aaKnown RBP eCLIP11.65□□□□□ -0.54
RRP8-201ENST00000254605 DDX10Q13206 875 aaKnown RBP11.64□□□□□ -0.55
RRP8-201ENST00000254605 CLSTN1O94985 981 aa11.64□□□□□ -0.55
RRP8-201ENST00000254605 LAS1LQ9Y4W2 734 aaKnown RBP11.63□□□□□ -0.55
RRP8-201ENST00000254605 CHMP7Q8WUX9 453 aaPredicted RBP11.62□□□□□ -0.55
RRP8-201ENST00000254605 SOX12O15370 315 aa11.61□□□□□ -0.55
RRP8-201ENST00000254605 CSRNP3Q8WYN3 585 aa11.61□□□□□ -0.55
RRP8-201ENST00000254605 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.6□□□□□ -0.55
RRP8-201ENST00000254605 MYH16Q9H6N6 1097 aa11.59□□□□□ -0.55
RRP8-201ENST00000254605 RGL3Q3MIN7 710 aa11.59□□□□□ -0.55
RRP8-201ENST00000254605 TONSLQ96HA7 1378 aa11.58□□□□□ -0.56
RRP8-201ENST00000254605 ZCCHC6Q5VYS8 1495 aaKnown RBP11.58□□□□□ -0.56
RRP8-201ENST00000254605 ISY1Q9ULR0 285 aaKnown RBP11.58□□□□□ -0.56
RRP8-201ENST00000254605 NCLP19338 710 aaKnown RBP11.57□□□□□ -0.56
RRP8-201ENST00000254605 MLECQ14165 292 aa11.56□□□□□ -0.56
RRP8-201ENST00000254605 TNNT2P45379 298 aaPredicted RBP11.56□□□□□ -0.56
RRP8-201ENST00000254605 NEUROD2Q15784 382 aa11.55□□□□□ -0.56
RRP8-201ENST00000254605 NAP1L2Q9ULW6 460 aaPredicted RBP11.55□□□□□ -0.56
RRP8-201ENST00000254605 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.55□□□□□ -0.56
RRP8-201ENST00000254605 CCDC136Q96JN2 1154 aa11.54□□□□□ -0.56
RRP8-201ENST00000254605 ANO8Q9HCE9 1232 aaPredicted RBP11.52□□□□□ -0.56
RRP8-201ENST00000254605 TSPY4P0CV99 314 aa11.5□□□□□ -0.57
RRP8-201ENST00000254605 TSPY10P0CW01 314 aa11.5□□□□□ -0.57
RRP8-201ENST00000254605 RRP7BPQ9NSQ0 103 aa11.5□□□□□ -0.57
RRP8-201ENST00000254605 MRS2Q9HD23 443 aa11.48□□□□□ -0.57
RRP8-201ENST00000254605 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
RRP8-201ENST00000254605 PLCB2Q00722 1185 aa11.48□□□□□ -0.57
RRP8-201ENST00000254605 ZNF330Q9Y3S2 320 aaPredicted RBP11.47□□□□□ -0.57
RRP8-201ENST00000254605 RB1CC1Q8TDY2 1594 aa11.46□□□□□ -0.58
RRP8-201ENST00000254605 ZRSR1Q15695 479 aaKnown RBP11.45□□□□□ -0.58
RRP8-201ENST00000254605 PRM3Q9NNZ6 103 aa11.45□□□□□ -0.58
RRP8-201ENST00000254605 PDE4CQ08493 712 aa11.44□□□□□ -0.58
RRP8-201ENST00000254605 OS9Q13438 667 aaPredicted RBP11.44□□□□□ -0.58
RRP8-201ENST00000254605 CCDC9Q9Y3X0 531 aaKnown RBP11.44□□□□□ -0.58
RRP8-201ENST00000254605 SAFB2Q14151 953 aaKnown RBP eCLIP11.43□□□□□ -0.58
RRP8-201ENST00000254605 PTMAP06454 111 aaKnown RBP11.4□□□□□ -0.58
RRP8-201ENST00000254605 POGKQ9P215 609 aa11.4□□□□□ -0.58
RRP8-201ENST00000254605 FGD1P98174 961 aa11.4□□□□□ -0.58
RRP8-201ENST00000254605 MTUS2Q5JR59 1369 aa11.39□□□□□ -0.59
RRP8-201ENST00000254605 DNTTIP2Q5QJE6 756 aaKnown RBP11.39□□□□□ -0.59
RRP8-201ENST00000254605 FTSJ3Q8IY81 847 aaKnown RBP11.38□□□□□ -0.59
RRP8-201ENST00000254605 FRAT1Q92837 279 aaPredicted RBP11.37□□□□□ -0.59
RRP8-201ENST00000254605 U2SURPO15042 1029 aaKnown RBP11.37□□□□□ -0.59
RRP8-201ENST00000254605 ACIN1Q9UKV3 1341 aaKnown RBP11.36□□□□□ -0.59
RRP8-201ENST00000254605 PAK3O75914 559 aaPredicted RBP11.36□□□□□ -0.59
RRP8-201ENST00000254605 KCNJ4P48050 445 aa11.36□□□□□ -0.59
RRP8-201ENST00000254605 ERICH6BQ5W0A0 696 aa11.35□□□□□ -0.59
RRP8-201ENST00000254605 NACADO15069 1562 aa11.35□□□□□ -0.59
RRP8-201ENST00000254605 TRIM44Q96DX7 344 aaPredicted RBP11.34□□□□□ -0.59
RRP8-201ENST00000254605 PLEKHD1A6NEE1 506 aa11.34□□□□□ -0.59
RRP8-201ENST00000254605 APBB1O00213 710 aa11.34□□□□□ -0.59
RRP8-201ENST00000254605 CC2D1BQ5T0F9 858 aaKnown RBP11.34□□□□□ -0.59
RRP8-201ENST00000254605 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
RRP8-201ENST00000254605 FBXO3Q9UK99 471 aa11.33□□□□□ -0.59
RRP8-201ENST00000254605 CASC1Q6TDU7 716 aa11.32□□□□□ -0.6
RRP8-201ENST00000254605 RGS3P49796 1198 aa11.31□□□□□ -0.6
RRP8-201ENST00000254605 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
RRP8-201ENST00000254605 MAPK8IP3Q9UPT6 1336 aa11.31□□□□□ -0.6
RRP8-201ENST00000254605 ERCC6Q03468 1493 aa11.31□□□□□ -0.6
RRP8-201ENST00000254605 STK26Q9P289 416 aa11.31□□□□□ -0.6
RRP8-201ENST00000254605 CFAP53Q96M91 514 aa11.3□□□□□ -0.6
RRP8-201ENST00000254605 CSB-PGBD3P0DP91 1061 aa11.29□□□□□ -0.6
RRP8-201ENST00000254605 KNSTRNQ9Y448 316 aa11.28□□□□□ -0.6
RRP8-201ENST00000254605 GLIPR1L2Q4G1C9 344 aa11.27□□□□□ -0.6
RRP8-201ENST00000254605 KLHL34Q8N239 644 aa11.27□□□□□ -0.61
RRP8-201ENST00000254605 WWC1Q8IX03 1113 aa11.26□□□□□ -0.61
RRP8-201ENST00000254605 GOLGA6L22H0YM25 854 aa11.26□□□□□ -0.61
RRP8-201ENST00000254605 BECN1Q14457 450 aa11.25□□□□□ -0.61
RRP8-201ENST00000254605 G3V3G9 751 aa11.25□□□□□ -0.61
RRP8-201ENST00000254605 DCAF8Q5TAQ9 597 aa11.25□□□□□ -0.61
RRP8-201ENST00000254605 MSH5O43196 834 aa11.24□□□□□ -0.61
RRP8-201ENST00000254605 CFDP1Q9UEE9 299 aaPredicted RBP11.24□□□□□ -0.61
RRP8-201ENST00000254605 SRPK2P78362 688 aaKnown RBP11.24□□□□□ -0.61
RRP8-201ENST00000254605 CHMP3Q9Y3E7 222 aa11.24□□□□□ -0.61
RRP8-201ENST00000254605 CARD11Q9BXL7 1154 aa11.23□□□□□ -0.61
RRP8-201ENST00000254605 ARID3AQ99856 593 aa11.22□□□□□ -0.61
RRP8-201ENST00000254605 PHF23Q9BUL5 403 aaPredicted RBP11.22□□□□□ -0.61
RRP8-201ENST00000254605 EIF4G2P78344 907 aaKnown RBP eCLIP11.22□□□□□ -0.61
RRP8-201ENST00000254605 GNL2Q13823 731 aaKnown RBP11.22□□□□□ -0.61
RRP8-201ENST00000254605 NUTM2FA1L443 756 aa11.22□□□□□ -0.61
RRP8-201ENST00000254605 HSP90AB1P08238 724 aaKnown RBP11.22□□□□□ -0.61
RRP8-201ENST00000254605 NUTM2DQ5VT03 806 aaPredicted RBP11.22□□□□□ -0.61
RRP8-201ENST00000254605 AEBP2Q6ZN18 517 aaPredicted RBP11.21□□□□□ -0.62
RRP8-201ENST00000254605 TMX4Q9H1E5 349 aaPredicted RBP11.2□□□□□ -0.62
RRP8-201ENST00000254605 MIER1Q8N108 512 aa11.2□□□□□ -0.62
RRP8-201ENST00000254605 GGT6Q6P531 493 aa11.19□□□□□ -0.62
RRP8-201ENST00000254605 DCAF1Q9Y4B6 1507 aa11.19□□□□□ -0.62
RRP8-201ENST00000254605 VPS53Q5VIR6 699 aa11.19□□□□□ -0.62
RRP8-201ENST00000254605 CREBRFQ8IUR6 639 aa11.19□□□□□ -0.62
RRP8-201ENST00000254605 KRI1Q8N9T8 703 aaKnown RBP11.19□□□□□ -0.62
RRP8-201ENST00000254605 NAP1L5Q96NT1 182 aaPredicted RBP11.18□□□□□ -0.62
RRP8-201ENST00000254605 DRC7Q8IY82 874 aa11.18□□□□□ -0.62
RRP8-201ENST00000254605 NUDCQ9Y266 331 aa11.17□□□□□ -0.62
RRP8-201ENST00000254605 GOLGA6L4A6NEF3 574 aa11.17□□□□□ -0.62
RRP8-201ENST00000254605 SUPT16HQ9Y5B9 1047 aaKnown RBP11.17□□□□□ -0.62
RRP8-201ENST00000254605 LTV1Q96GA3 475 aaPredicted RBP11.16□□□□□ -0.62
RRP8-201ENST00000254605 RAD21O60216 631 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms