RNA–Protein interactions for RNA: ENST00000253807.2

PCDHAC1-201, Transcript of protocadherin alpha subfamily C, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHAC1, Length 5,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1-201ENST00000253807 CCDC88BA6NC98 1476 aa16.78■□□□□ 0.28
PCDHAC1-201ENST00000253807 STAG3Q9UJ98 1225 aa16.78■□□□□ 0.28
PCDHAC1-201ENST00000253807 HIRIP3Q9BW71 556 aaPredicted RBP16.76■□□□□ 0.27
PCDHAC1-201ENST00000253807 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
PCDHAC1-201ENST00000253807 SCAF1Q9H7N4 1312 aaKnown RBP16.73■□□□□ 0.27
PCDHAC1-201ENST00000253807 CARMIL1Q5VZK9 1371 aa16.72■□□□□ 0.27
PCDHAC1-201ENST00000253807 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
PCDHAC1-201ENST00000253807 CFDP1Q9UEE9 299 aaPredicted RBP16.71■□□□□ 0.27
PCDHAC1-201ENST00000253807 CUX2O14529 1486 aa16.7■□□□□ 0.26
PCDHAC1-201ENST00000253807 CCNB3Q8WWL7 1395 aa16.7■□□□□ 0.26
PCDHAC1-201ENST00000253807 SALL2Q9Y467 1007 aaPredicted RBP16.69■□□□□ 0.26
PCDHAC1-201ENST00000253807 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
PCDHAC1-201ENST00000253807 WDR43Q15061 677 aaKnown RBP eCLIP16.68■□□□□ 0.26
PCDHAC1-201ENST00000253807 NPM2Q86SE8 214 aaKnown RBP16.68■□□□□ 0.26
PCDHAC1-201ENST00000253807 VPS8Q8N3P4 1428 aa16.67■□□□□ 0.26
PCDHAC1-201ENST00000253807 CCDC136Q96JN2 1154 aa16.67■□□□□ 0.26
PCDHAC1-201ENST00000253807 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.67■□□□□ 0.26
PCDHAC1-201ENST00000253807 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
PCDHAC1-201ENST00000253807 KCNH8Q96L42 1107 aa16.65■□□□□ 0.26
PCDHAC1-201ENST00000253807 BCL11AQ9H165 835 aa16.65■□□□□ 0.26
PCDHAC1-201ENST00000253807 TOP2AP11388 1531 aaKnown RBP16.64■□□□□ 0.25
PCDHAC1-201ENST00000253807 SIN3AQ96ST3 1273 aa16.6■□□□□ 0.25
PCDHAC1-201ENST00000253807 TIMELESSQ9UNS1 1208 aa16.6■□□□□ 0.25
PCDHAC1-201ENST00000253807 UPF2Q9HAU5 1272 aaKnown RBP16.58■□□□□ 0.24
PCDHAC1-201ENST00000253807 WIZO95785 1651 aa16.57■□□□□ 0.24
PCDHAC1-201ENST00000253807 RGL3Q3MIN7 710 aa16.56■□□□□ 0.24
PCDHAC1-201ENST00000253807 ERCC6Q03468 1493 aa16.55■□□□□ 0.24
PCDHAC1-201ENST00000253807 CDCA8Q53HL2 280 aa16.54■□□□□ 0.24
PCDHAC1-201ENST00000253807 CARD11Q9BXL7 1154 aa16.54■□□□□ 0.24
PCDHAC1-201ENST00000253807 IRX6P78412 446 aaPredicted RBP16.52■□□□□ 0.24
PCDHAC1-201ENST00000253807 SETD5Q9C0A6 1442 aa16.52■□□□□ 0.23
PCDHAC1-201ENST00000253807 KANK4Q5T7N3 995 aaPredicted RBP16.51■□□□□ 0.23
PCDHAC1-201ENST00000253807 EIF4G1Q04637 1599 aaKnown RBP16.5■□□□□ 0.23
PCDHAC1-201ENST00000253807 ARHGAP35Q9NRY4 1499 aa16.49■□□□□ 0.23
PCDHAC1-201ENST00000253807 PDS5BQ9NTI5 1447 aa16.47■□□□□ 0.23
PCDHAC1-201ENST00000253807 HSP90AA1P07900 732 aaKnown RBP16.46■□□□□ 0.23
PCDHAC1-201ENST00000253807 PLPPR3Q6T4P5 718 aa16.46■□□□□ 0.23
PCDHAC1-201ENST00000253807 KNSTRNQ9Y448 316 aa16.46■□□□□ 0.23
PCDHAC1-201ENST00000253807 FMN1Q68DA7 1419 aa16.44■□□□□ 0.22
PCDHAC1-201ENST00000253807 ATAD2BQ9ULI0 1458 aa16.43■□□□□ 0.22
PCDHAC1-201ENST00000253807 CADPSQ9ULU8 1353 aa16.42■□□□□ 0.22
PCDHAC1-201ENST00000253807 SMARCA4P51532 1647 aa16.41■□□□□ 0.22
PCDHAC1-201ENST00000253807 PPP1R15AO75807 674 aaPredicted RBP16.4■□□□□ 0.22
PCDHAC1-201ENST00000253807 SUPT16HQ9Y5B9 1047 aaKnown RBP16.4■□□□□ 0.22
PCDHAC1-201ENST00000253807 CFAP53Q96M91 514 aa16.4■□□□□ 0.22
PCDHAC1-201ENST00000253807 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
PCDHAC1-201ENST00000253807 RAPGEF2Q9Y4G8 1499 aa16.38■□□□□ 0.21
PCDHAC1-201ENST00000253807 RAB3GAP2Q9H2M9 1393 aa16.37■□□□□ 0.21
PCDHAC1-201ENST00000253807 CCER2I3L3R5 266 aa16.37■□□□□ 0.21
PCDHAC1-201ENST00000253807 CARMIL2Q6F5E8 1435 aa16.36■□□□□ 0.21
PCDHAC1-201ENST00000253807 ANP32BQ92688 251 aaKnown RBP16.35■□□□□ 0.21
PCDHAC1-201ENST00000253807 DCAF11Q8TEB1 546 aa16.34■□□□□ 0.21
PCDHAC1-201ENST00000253807 MYH16Q9H6N6 1097 aa16.33■□□□□ 0.21
PCDHAC1-201ENST00000253807 PPP4R2Q9NY27 417 aa16.32■□□□□ 0.2
PCDHAC1-201ENST00000253807 TMF1P82094 1093 aa16.31■□□□□ 0.2
PCDHAC1-201ENST00000253807 HSPA5P11021 654 aaKnown RBP16.3■□□□□ 0.2
PCDHAC1-201ENST00000253807 NBR1Q14596 966 aa16.3■□□□□ 0.2
PCDHAC1-201ENST00000253807 KANK1Q14678 1352 aa16.29■□□□□ 0.2
PCDHAC1-201ENST00000253807 DDRGK1Q96HY6 314 aa16.29■□□□□ 0.2
PCDHAC1-201ENST00000253807 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
PCDHAC1-201ENST00000253807 PKD2Q13563 968 aa16.29■□□□□ 0.2
PCDHAC1-201ENST00000253807 MPHOSPH9Q99550 1183 aa16.28■□□□□ 0.2
PCDHAC1-201ENST00000253807 SENP3-EIF4A1A0A087X0R7 540 aa16.27■□□□□ 0.19
PCDHAC1-201ENST00000253807 FHOD3Q2V2M9 1422 aa16.27■□□□□ 0.19
PCDHAC1-201ENST00000253807 RUSC2Q8N2Y8 1516 aa16.26■□□□□ 0.19
PCDHAC1-201ENST00000253807 NUDCQ9Y266 331 aa16.25■□□□□ 0.19
PCDHAC1-201ENST00000253807 CC2D1BQ5T0F9 858 aaKnown RBP16.25■□□□□ 0.19
PCDHAC1-201ENST00000253807 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
PCDHAC1-201ENST00000253807 BECN1Q14457 450 aa16.23■□□□□ 0.19
PCDHAC1-201ENST00000253807 POGKQ9P215 609 aa16.23■□□□□ 0.19
PCDHAC1-201ENST00000253807 FOXD1Q16676 465 aa16.22■□□□□ 0.19
PCDHAC1-201ENST00000253807 MAPK8IP3Q9UPT6 1336 aa16.21■□□□□ 0.19
PCDHAC1-201ENST00000253807 ARID4BQ4LE39 1312 aaPredicted RBP16.21■□□□□ 0.19
PCDHAC1-201ENST00000253807 NUP155O75694 1391 aa16.2■□□□□ 0.18
PCDHAC1-201ENST00000253807 PPM1GO15355 546 aaPredicted RBP16.19■□□□□ 0.18
PCDHAC1-201ENST00000253807 NEUROD2Q15784 382 aa16.19■□□□□ 0.18
PCDHAC1-201ENST00000253807 C14orf37Q86TY3 774 aa16.18■□□□□ 0.18
PCDHAC1-201ENST00000253807 FTSJ3Q8IY81 847 aaKnown RBP16.18■□□□□ 0.18
PCDHAC1-201ENST00000253807 EFCAB2Q5VUJ9 269 aa16.18■□□□□ 0.18
PCDHAC1-201ENST00000253807 CCDC18Q5T9S5 1454 aa16.17■□□□□ 0.18
PCDHAC1-201ENST00000253807 FANCD2Q9BXW9 1451 aa16.17■□□□□ 0.18
PCDHAC1-201ENST00000253807 DHX57Q6P158 1386 aaKnown RBP16.15■□□□□ 0.18
PCDHAC1-201ENST00000253807 RSPH4AQ5TD94 716 aa16.15■□□□□ 0.18
PCDHAC1-201ENST00000253807 KTN1Q86UP2 1357 aaKnown RBP16.13■□□□□ 0.17
PCDHAC1-201ENST00000253807 MS4A1P11836 297 aa16.13■□□□□ 0.17
PCDHAC1-201ENST00000253807 TNNT2P45379 298 aaPredicted RBP16.13■□□□□ 0.17
PCDHAC1-201ENST00000253807 L3MBTL2Q969R5 705 aa16.13■□□□□ 0.17
PCDHAC1-201ENST00000253807 PNNQ9H307 717 aaKnown RBP16.13■□□□□ 0.17
PCDHAC1-201ENST00000253807 ZBTB7CA1YPR0 619 aa16.13■□□□□ 0.17
PCDHAC1-201ENST00000253807 B4GALNT3Q6L9W6 998 aa16.12■□□□□ 0.17
PCDHAC1-201ENST00000253807 ROCK2O75116 1388 aaKnown RBP16.12■□□□□ 0.17
PCDHAC1-201ENST00000253807 EIF5BO60841 1220 aaKnown RBP16.12■□□□□ 0.17
PCDHAC1-201ENST00000253807 RALBP1Q15311 655 aa16.11■□□□□ 0.17
PCDHAC1-201ENST00000253807 ERICH6BQ5W0A0 696 aa16.11■□□□□ 0.17
PCDHAC1-201ENST00000253807 ANP32EQ9BTT0 268 aa16.11■□□□□ 0.17
PCDHAC1-201ENST00000253807 CHMP4BQ9H444 224 aaKnown RBP16.11■□□□□ 0.17
PCDHAC1-201ENST00000253807 FRAT1Q92837 279 aaPredicted RBP16.1■□□□□ 0.17
PCDHAC1-201ENST00000253807 JPH4Q96JJ6 628 aa16.1■□□□□ 0.17
PCDHAC1-201ENST00000253807 U2SURPO15042 1029 aaKnown RBP16.09■□□□□ 0.17
PCDHAC1-201ENST00000253807 HDGFP51858 240 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms