RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 SSUH2Q9Y2M2 353 aa6.78□□□□□ -1.32
RBM39-201ENST00000253363 HMGXB3Q12766 1538 aa6.78□□□□□ -1.32
RBM39-201ENST00000253363 CHGAP10645 457 aaKnown RBP6.77□□□□□ -1.32
RBM39-201ENST00000253363 CIZ1Q9ULV3 898 aaPredicted RBP6.77□□□□□ -1.33
RBM39-201ENST00000253363 BAZ1AQ9NRL2 1556 aaPredicted RBP6.76□□□□□ -1.33
RBM39-201ENST00000253363 PEG3Q9GZU2 1588 aa6.76□□□□□ -1.33
RBM39-201ENST00000253363 SPRYD3Q8NCJ5 442 aa6.75□□□□□ -1.33
RBM39-201ENST00000253363 STAG3Q9UJ98 1225 aa6.75□□□□□ -1.33
RBM39-201ENST00000253363 SPDYE2BA6NHP3 402 aa6.75□□□□□ -1.33
RBM39-201ENST00000253363 SPDYE6P0CI01 402 aa6.75□□□□□ -1.33
RBM39-201ENST00000253363 SPDYE2Q495Y8 402 aa6.75□□□□□ -1.33
RBM39-201ENST00000253363 NCAPD3P42695 1498 aa6.73□□□□□ -1.33
RBM39-201ENST00000253363 SMARCA4P51532 1647 aa6.73□□□□□ -1.33
RBM39-201ENST00000253363 RNF25Q96BH1 459 aaPredicted RBP6.72□□□□□ -1.33
RBM39-201ENST00000253363 ATAD2BQ9ULI0 1458 aa6.67□□□□□ -1.34
RBM39-201ENST00000253363 NKX1-1Q15270 411 aaPredicted RBP6.65□□□□□ -1.34
RBM39-201ENST00000253363 BAZ1BQ9UIG0 1483 aaKnown RBP6.63□□□□□ -1.35
RBM39-201ENST00000253363 HS6ST3Q8IZP7 471 aa6.63□□□□□ -1.35
RBM39-201ENST00000253363 LAMC3Q9Y6N6 1575 aa6.62□□□□□ -1.35
RBM39-201ENST00000253363 CUX2O14529 1486 aa6.62□□□□□ -1.35
RBM39-201ENST00000253363 PLEKHG5O94827 1062 aa6.61□□□□□ -1.35
RBM39-201ENST00000253363 DNAJC5Q9H3Z4 198 aa6.6□□□□□ -1.35
RBM39-201ENST00000253363 ZBTB47Q9UFB7 747 aaPredicted RBP6.6□□□□□ -1.35
RBM39-201ENST00000253363 NBR1Q14596 966 aa6.59□□□□□ -1.35
RBM39-201ENST00000253363 NUBP1P53384 320 aa6.58□□□□□ -1.36
RBM39-201ENST00000253363 GTPBP6O43824 516 aaPredicted RBP6.57□□□□□ -1.36
RBM39-201ENST00000253363 DAXXQ9UER7 740 aaPredicted RBP6.57□□□□□ -1.36
RBM39-201ENST00000253363 STK25O00506 426 aa6.56□□□□□ -1.36
RBM39-201ENST00000253363 TOP2AP11388 1531 aaKnown RBP6.56□□□□□ -1.36
RBM39-201ENST00000253363 MROH2BQ7Z745 1585 aa6.55□□□□□ -1.36
RBM39-201ENST00000253363 DCAF8Q5TAQ9 597 aa6.55□□□□□ -1.36
RBM39-201ENST00000253363 RIOK3O14730 519 aaKnown RBP6.54□□□□□ -1.36
RBM39-201ENST00000253363 TRIM41Q8WV44 630 aa6.54□□□□□ -1.36
RBM39-201ENST00000253363 PDS5BQ9NTI5 1447 aa6.54□□□□□ -1.36
RBM39-201ENST00000253363 GSE1Q14687 1217 aa6.53□□□□□ -1.36
RBM39-201ENST00000253363 ERCC6Q03468 1493 aa6.52□□□□□ -1.37
RBM39-201ENST00000253363 PRDM2Q13029 1718 aa6.52□□□□□ -1.37
RBM39-201ENST00000253363 MNX1P50219 401 aaPredicted RBP6.52□□□□□ -1.37
RBM39-201ENST00000253363 RASEFQ8IZ41 740 aa6.51□□□□□ -1.37
RBM39-201ENST00000253363 CLEC11AQ9Y240 323 aa6.51□□□□□ -1.37
RBM39-201ENST00000253363 BCL11BQ9C0K0 894 aaPredicted RBP6.5□□□□□ -1.37
RBM39-201ENST00000253363 THOC2Q8NI27 1593 aaKnown RBP6.5□□□□□ -1.37
RBM39-201ENST00000253363 TIMELESSQ9UNS1 1208 aa6.5□□□□□ -1.37
RBM39-201ENST00000253363 CREBZFQ9NS37 354 aa6.49□□□□□ -1.37
RBM39-201ENST00000253363 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.49□□□□□ -1.37
RBM39-201ENST00000253363 PYGBP11216 843 aa6.49□□□□□ -1.37
RBM39-201ENST00000253363 ZFP91Q96JP5 570 aaPredicted RBP6.49□□□□□ -1.37
RBM39-201ENST00000253363 FAM212AQ96EL1 285 aa6.48□□□□□ -1.37
RBM39-201ENST00000253363 STK24Q9Y6E0 443 aa6.48□□□□□ -1.37
RBM39-201ENST00000253363 CADPSQ9ULU8 1353 aa6.48□□□□□ -1.37
RBM39-201ENST00000253363 RSF1Q96T23 1441 aaPredicted RBP6.48□□□□□ -1.37
RBM39-201ENST00000253363 TULP1O00294 542 aaPredicted RBP6.47□□□□□ -1.37
RBM39-201ENST00000253363 MRC2Q9UBG0 1479 aa6.47□□□□□ -1.37
RBM39-201ENST00000253363 WDR62O43379 1518 aa6.47□□□□□ -1.37
RBM39-201ENST00000253363 WIZO95785 1651 aa6.46□□□□□ -1.37
RBM39-201ENST00000253363 CFTRP13569 1480 aa6.46□□□□□ -1.38
RBM39-201ENST00000253363 VGFO15240 615 aaPredicted RBP6.46□□□□□ -1.38
RBM39-201ENST00000253363 CACNB1Q02641 598 aaPredicted RBP6.45□□□□□ -1.38
RBM39-201ENST00000253363 CEP164Q9UPV0 1460 aa6.45□□□□□ -1.38
RBM39-201ENST00000253363 ABCC8Q09428 1581 aa6.45□□□□□ -1.38
RBM39-201ENST00000253363 PRR29P0C7W0 189 aa6.44□□□□□ -1.38
RBM39-201ENST00000253363 SPDYE1Q8NFV5 336 aaPredicted RBP6.44□□□□□ -1.38
RBM39-201ENST00000253363 WDR97A6NE52 1622 aa6.44□□□□□ -1.38
RBM39-201ENST00000253363 CADPS2Q86UW7 1296 aa6.42□□□□□ -1.38
RBM39-201ENST00000253363 KIF21AQ7Z4S6 1674 aa6.42□□□□□ -1.38
RBM39-201ENST00000253363 KCNV2Q8TDN2 545 aa6.4□□□□□ -1.38
RBM39-201ENST00000253363 FANCD2Q9BXW9 1451 aa6.4□□□□□ -1.39
RBM39-201ENST00000253363 REM2Q8IYK8 340 aaPredicted RBP6.4□□□□□ -1.39
RBM39-201ENST00000253363 CHRM1P11229 460 aaPredicted RBP6.39□□□□□ -1.39
RBM39-201ENST00000253363 GTF3C3Q9Y5Q9 886 aa6.39□□□□□ -1.39
RBM39-201ENST00000253363 NESP48681 1621 aa6.39□□□□□ -1.39
RBM39-201ENST00000253363 AKT1S1Q96B36 256 aa6.38□□□□□ -1.39
RBM39-201ENST00000253363 DNMBPQ6XZF7 1577 aa6.36□□□□□ -1.39
RBM39-201ENST00000253363 CHADLQ6NUI6 762 aa6.36□□□□□ -1.39
RBM39-201ENST00000253363 SGIP1Q9BQI5 828 aa6.36□□□□□ -1.39
RBM39-201ENST00000253363 TSPYL2Q9H2G4 693 aaPredicted RBP6.36□□□□□ -1.39
RBM39-201ENST00000253363 PITPNM1O00562 1244 aa6.35□□□□□ -1.39
RBM39-201ENST00000253363 IFT140Q96RY7 1462 aa6.35□□□□□ -1.39
RBM39-201ENST00000253363 CCDC88BA6NC98 1476 aa6.35□□□□□ -1.39
RBM39-201ENST00000253363 PCDHB8Q9UN66 801 aa6.34□□□□□ -1.39
RBM39-201ENST00000253363 PCDHB13Q9Y5F0 798 aa6.34□□□□□ -1.39
RBM39-201ENST00000253363 RBM42Q9BTD8 480 aaKnown RBP6.33□□□□□ -1.4
RBM39-201ENST00000253363 LMOD2Q6P5Q4 547 aa6.33□□□□□ -1.4
RBM39-201ENST00000253363 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.32□□□□□ -1.4
RBM39-201ENST00000253363 P3H3Q8IVL6 736 aa6.32□□□□□ -1.4
RBM39-201ENST00000253363 MFRPQ9BY79 579 aa6.32□□□□□ -1.4
RBM39-201ENST00000253363 RYDENQ9NUL5 291 aaKnown RBP6.32□□□□□ -1.4
RBM39-201ENST00000253363 PPP1R37O75864 691 aa6.31□□□□□ -1.4
RBM39-201ENST00000253363 URB2Q14146 1524 aaKnown RBP6.31□□□□□ -1.4
RBM39-201ENST00000253363 TOPBP1Q92547 1522 aa6.29□□□□□ -1.4
RBM39-201ENST00000253363 WDR70Q9NW82 654 aa6.29□□□□□ -1.4
RBM39-201ENST00000253363 TMEM132AQ24JP5 1023 aa6.28□□□□□ -1.4
RBM39-201ENST00000253363 PDAP1Q13442 181 aaKnown RBP6.27□□□□□ -1.41
RBM39-201ENST00000253363 SEMA3EO15041 775 aa6.26□□□□□ -1.41
RBM39-201ENST00000253363 BRPF1P55201 1214 aaPredicted RBP6.26□□□□□ -1.41
RBM39-201ENST00000253363 ZNF467Q7Z7K2 595 aaPredicted RBP6.26□□□□□ -1.41
RBM39-201ENST00000253363 CCDC61Q9Y6R9 512 aa6.25□□□□□ -1.41
RBM39-201ENST00000253363 TARBP1Q13395 1621 aaKnown RBP6.25□□□□□ -1.41
RBM39-201ENST00000253363 PSEN1P49768 467 aa6.25□□□□□ -1.41
RBM39-201ENST00000253363 FARP1Q9Y4F1 1045 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms