RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 FHAD1B1AJZ9 1412 aa27.04■■□□□ 1.92
PCCB-201ENST00000251654 PPARGC1BQ86YN6 1023 aaKnown RBP27.02■■□□□ 1.92
PCCB-201ENST00000251654 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
PCCB-201ENST00000251654 EFCAB5A4FU69 1503 aa26.92■■□□□ 1.9
PCCB-201ENST00000251654 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
PCCB-201ENST00000251654 SAMD9Q5K651 1589 aa26.84■■□□□ 1.89
PCCB-201ENST00000251654 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
PCCB-201ENST00000251654 IQGAP2Q13576 1575 aa26.79■■□□□ 1.88
PCCB-201ENST00000251654 TTBK1Q5TCY1 1321 aaPredicted RBP26.78■■□□□ 1.88
PCCB-201ENST00000251654 FHOD3Q2V2M9 1422 aa26.77■■□□□ 1.88
PCCB-201ENST00000251654 SYNJ2O15056 1496 aa26.77■■□□□ 1.88
PCCB-201ENST00000251654 APLP2Q06481 763 aa26.76■■□□□ 1.87
PCCB-201ENST00000251654 PCF11O94913 1555 aaKnown RBP26.72■■□□□ 1.87
PCCB-201ENST00000251654 P3H3Q8IVL6 736 aa26.72■■□□□ 1.87
PCCB-201ENST00000251654 KIAA0586Q9BVV6 1533 aa26.68■■□□□ 1.86
PCCB-201ENST00000251654 MAP3K1Q13233 1512 aa26.66■■□□□ 1.86
PCCB-201ENST00000251654 UGGT2Q9NYU1 1516 aa26.66■■□□□ 1.86
PCCB-201ENST00000251654 CEP170Q5SW79 1584 aa26.65■■□□□ 1.86
PCCB-201ENST00000251654 FYCO1Q9BQS8 1478 aa26.65■■□□□ 1.86
PCCB-201ENST00000251654 TIAM1Q13009 1591 aa26.65■■□□□ 1.86
PCCB-201ENST00000251654 FMN1Q68DA7 1419 aa26.65■■□□□ 1.86
PCCB-201ENST00000251654 CHMP7Q8WUX9 453 aaPredicted RBP26.62■■□□□ 1.85
PCCB-201ENST00000251654 CASKIN1Q8WXD9 1431 aa26.62■■□□□ 1.85
PCCB-201ENST00000251654 CFAP43Q8NDM7 1665 aa26.62■■□□□ 1.85
PCCB-201ENST00000251654 KANK4Q5T7N3 995 aaPredicted RBP26.61■■□□□ 1.85
PCCB-201ENST00000251654 NUP160Q12769 1436 aa26.6■■□□□ 1.85
PCCB-201ENST00000251654 FBLN2P98095 1184 aa26.53■■□□□ 1.84
PCCB-201ENST00000251654 DISP1Q96F81 1524 aa26.53■■□□□ 1.84
PCCB-201ENST00000251654 KIAA0556O60303 1618 aa26.53■■□□□ 1.84
PCCB-201ENST00000251654 LRRC9Q6ZRR7 1453 aa26.5■■□□□ 1.83
PCCB-201ENST00000251654 LRRIQ1Q96JM4 1722 aa26.5■■□□□ 1.83
PCCB-201ENST00000251654 HRCP23327 699 aa26.49■■□□□ 1.83
PCCB-201ENST00000251654 CHD1O14646 1710 aa26.49■■□□□ 1.83
PCCB-201ENST00000251654 ATP1B4Q9UN42 357 aaPredicted RBP26.41■■□□□ 1.82
PCCB-201ENST00000251654 HECW1Q76N89 1606 aa26.38■■□□□ 1.81
PCCB-201ENST00000251654 RRBP1Q9P2E9 1410 aaKnown RBP26.38■■□□□ 1.81
PCCB-201ENST00000251654 JPH4Q96JJ6 628 aa26.34■■□□□ 1.81
PCCB-201ENST00000251654 CCDC18Q5T9S5 1454 aa26.33■■□□□ 1.81
PCCB-201ENST00000251654 CARMIL2Q6F5E8 1435 aa26.3■■□□□ 1.8
PCCB-201ENST00000251654 EPRSP07814 1512 aaKnown RBP26.28■■□□□ 1.8
PCCB-201ENST00000251654 RAPGEF6Q8TEU7 1601 aa26.27■■□□□ 1.8
PCCB-201ENST00000251654 PHLDB1Q86UU1 1377 aa26.27■■□□□ 1.8
PCCB-201ENST00000251654 SHROOM2Q13796 1616 aa26.26■■□□□ 1.79
PCCB-201ENST00000251654 CCNB3Q8WWL7 1395 aa26.25■■□□□ 1.79
PCCB-201ENST00000251654 MAGI3Q5TCQ9 1506 aa26.24■■□□□ 1.79
PCCB-201ENST00000251654 EHBP1L1Q8N3D4 1523 aa26.24■■□□□ 1.79
PCCB-201ENST00000251654 MTUS2Q5JR59 1369 aa26.23■■□□□ 1.79
PCCB-201ENST00000251654 NUP153P49790 1475 aaKnown RBP26.23■■□□□ 1.79
PCCB-201ENST00000251654 CDK13Q14004 1512 aaKnown RBP26.23■■□□□ 1.79
PCCB-201ENST00000251654 HNRNPUL2Q1KMD3 747 aaKnown RBP26.21■■□□□ 1.79
PCCB-201ENST00000251654 PRG4Q92954 1404 aaPredicted RBP26.19■■□□□ 1.78
PCCB-201ENST00000251654 SUPT6HQ7KZ85 1726 aaKnown RBP26.18■■□□□ 1.78
PCCB-201ENST00000251654 CLASP1Q7Z460 1538 aa26.17■■□□□ 1.78
PCCB-201ENST00000251654 PLB1Q6P1J6 1458 aa26.17■■□□□ 1.78
PCCB-201ENST00000251654 NCOA2Q15596 1464 aa26.14■■□□□ 1.78
PCCB-201ENST00000251654 ARHGEF11O15085 1522 aa26.14■■□□□ 1.77
PCCB-201ENST00000251654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.13■■□□□ 1.77
PCCB-201ENST00000251654 ABCA8O94911 1581 aa26.13■■□□□ 1.77
PCCB-201ENST00000251654 FGD6Q6ZV73 1430 aa26.07■■□□□ 1.76
PCCB-201ENST00000251654 ARID3CA6NKF2 412 aa26.06■■□□□ 1.76
PCCB-201ENST00000251654 ERCC6L2Q5T890 1561 aa26.06■■□□□ 1.76
PCCB-201ENST00000251654 ZEB1P37275 1124 aaPredicted RBP26.04■■□□□ 1.76
PCCB-201ENST00000251654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.04■■□□□ 1.76
PCCB-201ENST00000251654 MYOM3Q5VTT5 1437 aa26.04■■□□□ 1.76
PCCB-201ENST00000251654 CCER1Q8TC90 406 aaPredicted RBP26.02■■□□□ 1.76
PCCB-201ENST00000251654 PTPRGP23470 1445 aa26.02■■□□□ 1.76
PCCB-201ENST00000251654 FAM50AQ14320 339 aaKnown RBP25.96■■□□□ 1.75
PCCB-201ENST00000251654 TROQ12816 1431 aaPredicted RBP25.94■■□□□ 1.74
PCCB-201ENST00000251654 CDK11AQ9UQ88 783 aaPredicted RBP25.94■■□□□ 1.74
PCCB-201ENST00000251654 ATP10BO94823 1461 aa25.94■■□□□ 1.74
PCCB-201ENST00000251654 PTPN23Q9H3S7 1636 aa25.93■■□□□ 1.74
PCCB-201ENST00000251654 ADCY10Q96PN6 1610 aa25.93■■□□□ 1.74
PCCB-201ENST00000251654 ITGAEP38570 1179 aa25.93■■□□□ 1.74
PCCB-201ENST00000251654 UACAQ9BZF9 1416 aa25.9■■□□□ 1.74
PCCB-201ENST00000251654 TCOF1Q13428 1488 aaKnown RBP25.89■■□□□ 1.73
PCCB-201ENST00000251654 KIF14Q15058 1648 aa25.87■■□□□ 1.73
PCCB-201ENST00000251654 MIA2Q96PC5 1412 aa25.87■■□□□ 1.73
PCCB-201ENST00000251654 ABCC2Q92887 1545 aa25.86■■□□□ 1.73
PCCB-201ENST00000251654 PTPRKQ15262 1439 aa25.8■■□□□ 1.72
PCCB-201ENST00000251654 ITSN2Q9NZM3 1697 aa25.79■■□□□ 1.72
PCCB-201ENST00000251654 RAB3GAP2Q9H2M9 1393 aa25.78■■□□□ 1.72
PCCB-201ENST00000251654 SETD5Q9C0A6 1442 aa25.77■■□□□ 1.72
PCCB-201ENST00000251654 UHRF1BP1LA0JNW5 1464 aa25.76■■□□□ 1.71
PCCB-201ENST00000251654 PLEKHD1A6NEE1 506 aa25.76■■□□□ 1.71
PCCB-201ENST00000251654 DHX57Q6P158 1386 aaKnown RBP25.76■■□□□ 1.71
PCCB-201ENST00000251654 ABCC10Q5T3U5 1492 aa25.74■■□□□ 1.71
PCCB-201ENST00000251654 GPATCH8Q9UKJ3 1502 aaKnown RBP25.74■■□□□ 1.71
PCCB-201ENST00000251654 OSCARQ8IYS5 282 aa25.74■■□□□ 1.71
PCCB-201ENST00000251654 CDC42BPAQ5VT25 1732 aa25.72■■□□□ 1.71
PCCB-201ENST00000251654 ZCCHC11Q5TAX3 1644 aaKnown RBP25.69■■□□□ 1.7
PCCB-201ENST00000251654 HFM1A2PYH4 1435 aa25.69■■□□□ 1.7
PCCB-201ENST00000251654 KDM5BQ9UGL1 1544 aa25.69■■□□□ 1.7
PCCB-201ENST00000251654 DNMT1P26358 1616 aaKnown RBP25.67■■□□□ 1.7
PCCB-201ENST00000251654 CAMSAP2Q08AD1 1489 aa25.65■■□□□ 1.7
PCCB-201ENST00000251654 CLSPNQ9HAW4 1339 aa25.65■■□□□ 1.7
PCCB-201ENST00000251654 ZNF644Q9H582 1327 aaPredicted RBP25.63■■□□□ 1.69
PCCB-201ENST00000251654 NAIPQ13075 1403 aa25.63■■□□□ 1.69
PCCB-201ENST00000251654 CFDP1Q9UEE9 299 aaPredicted RBP25.62■■□□□ 1.69
PCCB-201ENST00000251654 GCC2Q8IWJ2 1684 aa25.62■■□□□ 1.69
PCCB-201ENST00000251654 DAPK1P53355 1430 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms