RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 MRC2Q9UBG0 1479 aa22.74■■□□□ 1.23
DDX49-201ENST00000247003 KANK4Q5T7N3 995 aaPredicted RBP22.74■■□□□ 1.23
DDX49-201ENST00000247003 TDRD9Q8NDG6 1382 aaKnown RBP22.74■■□□□ 1.23
DDX49-201ENST00000247003 ERCC6Q03468 1493 aa22.72■■□□□ 1.23
DDX49-201ENST00000247003 RRBP1Q9P2E9 1410 aaKnown RBP22.69■■□□□ 1.22
DDX49-201ENST00000247003 PCF11O94913 1555 aaKnown RBP22.69■■□□□ 1.22
DDX49-201ENST00000247003 CFAP43Q8NDM7 1665 aa22.69■■□□□ 1.22
DDX49-201ENST00000247003 PBRM1Q86U86 1689 aa22.68■■□□□ 1.22
DDX49-201ENST00000247003 FYCO1Q9BQS8 1478 aa22.64■■□□□ 1.21
DDX49-201ENST00000247003 FHOD3Q2V2M9 1422 aa22.63■■□□□ 1.21
DDX49-201ENST00000247003 THOC2Q8NI27 1593 aaKnown RBP22.63■■□□□ 1.21
DDX49-201ENST00000247003 WDR62O43379 1518 aa22.63■■□□□ 1.21
DDX49-201ENST00000247003 AQRO60306 1485 aaKnown RBP eCLIP22.62■■□□□ 1.21
DDX49-201ENST00000247003 LRRC9Q6ZRR7 1453 aa22.61■■□□□ 1.21
DDX49-201ENST00000247003 CCNB3Q8WWL7 1395 aa22.6■■□□□ 1.21
DDX49-201ENST00000247003 P3H3Q8IVL6 736 aa22.6■■□□□ 1.21
DDX49-201ENST00000247003 FMN1Q68DA7 1419 aa22.6■■□□□ 1.21
DDX49-201ENST00000247003 CASKIN1Q8WXD9 1431 aa22.58■■□□□ 1.2
DDX49-201ENST00000247003 SAMD9Q5K651 1589 aa22.58■■□□□ 1.2
DDX49-201ENST00000247003 IFT140Q96RY7 1462 aa22.55■■□□□ 1.2
DDX49-201ENST00000247003 ADAMTS12P58397 1594 aa22.54■■□□□ 1.2
DDX49-201ENST00000247003 ATP1B4Q9UN42 357 aaPredicted RBP22.52■■□□□ 1.2
DDX49-201ENST00000247003 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
DDX49-201ENST00000247003 SNAPC4Q5SXM2 1469 aa22.47■■□□□ 1.19
DDX49-201ENST00000247003 CLSPNQ9HAW4 1339 aa22.45■■□□□ 1.19
DDX49-201ENST00000247003 IQGAP2Q13576 1575 aa22.45■■□□□ 1.18
DDX49-201ENST00000247003 PHLDB1Q86UU1 1377 aa22.41■■□□□ 1.18
DDX49-201ENST00000247003 DHX57Q6P158 1386 aaKnown RBP22.39■■□□□ 1.17
DDX49-201ENST00000247003 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
DDX49-201ENST00000247003 ZNF608Q9ULD9 1512 aaPredicted RBP22.38■■□□□ 1.17
DDX49-201ENST00000247003 ITGAEP38570 1179 aa22.37■■□□□ 1.17
DDX49-201ENST00000247003 MTUS2Q5JR59 1369 aa22.35■■□□□ 1.17
DDX49-201ENST00000247003 LRRIQ1Q96JM4 1722 aa22.34■■□□□ 1.17
DDX49-201ENST00000247003 CCDC18Q5T9S5 1454 aa22.33■■□□□ 1.17
DDX49-201ENST00000247003 HECW1Q76N89 1606 aa22.33■■□□□ 1.17
DDX49-201ENST00000247003 FAM50AQ14320 339 aaKnown RBP22.32■■□□□ 1.16
DDX49-201ENST00000247003 EHBP1L1Q8N3D4 1523 aa22.32■■□□□ 1.16
DDX49-201ENST00000247003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.3■■□□□ 1.16
DDX49-201ENST00000247003 UGGT2Q9NYU1 1516 aa22.3■■□□□ 1.16
DDX49-201ENST00000247003 ZNF316A6NFI3 1004 aaPredicted RBP22.29■■□□□ 1.16
DDX49-201ENST00000247003 SUPT6HQ7KZ85 1726 aaKnown RBP22.29■■□□□ 1.16
DDX49-201ENST00000247003 DIEXFQ68CQ4 756 aaKnown RBP22.28■■□□□ 1.16
DDX49-201ENST00000247003 MAGI1Q96QZ7 1491 aaPredicted RBP22.27■■□□□ 1.15
DDX49-201ENST00000247003 RAB3GAP2Q9H2M9 1393 aa22.27■■□□□ 1.15
DDX49-201ENST00000247003 GRIN2AQ12879 1464 aa22.26■■□□□ 1.15
DDX49-201ENST00000247003 SETD5Q9C0A6 1442 aa22.26■■□□□ 1.15
DDX49-201ENST00000247003 KIAA0586Q9BVV6 1533 aa22.25■■□□□ 1.15
DDX49-201ENST00000247003 FGD6Q6ZV73 1430 aa22.25■■□□□ 1.15
DDX49-201ENST00000247003 NCOA2Q15596 1464 aa22.21■■□□□ 1.15
DDX49-201ENST00000247003 KIAA0556O60303 1618 aa22.21■■□□□ 1.15
DDX49-201ENST00000247003 MYOM3Q5VTT5 1437 aa22.18■■□□□ 1.14
DDX49-201ENST00000247003 SYNJ2O15056 1496 aa22.18■■□□□ 1.14
DDX49-201ENST00000247003 EPRSP07814 1512 aaKnown RBP22.17■■□□□ 1.14
DDX49-201ENST00000247003 DISP1Q96F81 1524 aa22.13■■□□□ 1.13
DDX49-201ENST00000247003 ARHGEF11O15085 1522 aa22.12■■□□□ 1.13
DDX49-201ENST00000247003 CHMP7Q8WUX9 453 aaPredicted RBP22.12■■□□□ 1.13
DDX49-201ENST00000247003 MAGI3Q5TCQ9 1506 aa22.11■■□□□ 1.13
DDX49-201ENST00000247003 PTPN23Q9H3S7 1636 aa22.1■■□□□ 1.13
DDX49-201ENST00000247003 MAPKBP1O60336 1514 aa22.1■■□□□ 1.13
DDX49-201ENST00000247003 CEP170Q5SW79 1584 aa22.1■■□□□ 1.13
DDX49-201ENST00000247003 CDK13Q14004 1512 aaKnown RBP22.09■■□□□ 1.13
DDX49-201ENST00000247003 RAPGEF6Q8TEU7 1601 aa22.08■■□□□ 1.13
DDX49-201ENST00000247003 FBLN2P98095 1184 aa22.03■■□□□ 1.12
DDX49-201ENST00000247003 HFM1A2PYH4 1435 aa22.02■■□□□ 1.12
DDX49-201ENST00000247003 TCOF1Q13428 1488 aaKnown RBP22.02■■□□□ 1.12
DDX49-201ENST00000247003 NUP160Q12769 1436 aa22.02■■□□□ 1.11
DDX49-201ENST00000247003 CARMIL2Q6F5E8 1435 aa22.02■■□□□ 1.11
DDX49-201ENST00000247003 MIA2Q96PC5 1412 aa22■■□□□ 1.11
DDX49-201ENST00000247003 NUP153P49790 1475 aaKnown RBP21.99■■□□□ 1.11
DDX49-201ENST00000247003 CDK11AQ9UQ88 783 aaPredicted RBP21.97■■□□□ 1.11
DDX49-201ENST00000247003 PTPRKQ15262 1439 aa21.95■■□□□ 1.1
DDX49-201ENST00000247003 ARID3CA6NKF2 412 aa21.94■■□□□ 1.1
DDX49-201ENST00000247003 GCC2Q8IWJ2 1684 aa21.93■■□□□ 1.1
DDX49-201ENST00000247003 NAIPQ13075 1403 aa21.92■■□□□ 1.1
DDX49-201ENST00000247003 UACAQ9BZF9 1416 aa21.92■■□□□ 1.1
DDX49-201ENST00000247003 AKNAQ7Z591 1439 aa21.9■■□□□ 1.1
DDX49-201ENST00000247003 JPH4Q96JJ6 628 aa21.89■■□□□ 1.09
DDX49-201ENST00000247003 TIMELESSQ9UNS1 1208 aa21.89■■□□□ 1.09
DDX49-201ENST00000247003 ITSN2Q9NZM3 1697 aa21.87■■□□□ 1.09
DDX49-201ENST00000247003 CENPBP07199 599 aaPredicted RBP21.87■■□□□ 1.09
DDX49-201ENST00000247003 PLB1Q6P1J6 1458 aa21.86■■□□□ 1.09
DDX49-201ENST00000247003 TROQ12816 1431 aaPredicted RBP21.85■■□□□ 1.09
DDX49-201ENST00000247003 NEUROD1Q13562 356 aa21.84■■□□□ 1.09
DDX49-201ENST00000247003 ADCY10Q96PN6 1610 aa21.84■■□□□ 1.09
DDX49-201ENST00000247003 CHD1O14646 1710 aa21.81■■□□□ 1.08
DDX49-201ENST00000247003 SIN3AQ96ST3 1273 aa21.81■■□□□ 1.08
DDX49-201ENST00000247003 DNMT1P26358 1616 aaKnown RBP21.81■■□□□ 1.08
DDX49-201ENST00000247003 ABCA8O94911 1581 aa21.79■■□□□ 1.08
DDX49-201ENST00000247003 CHIC2Q9UKJ5 165 aa21.78■■□□□ 1.08
DDX49-201ENST00000247003 DAPK1P53355 1430 aa21.78■■□□□ 1.08
DDX49-201ENST00000247003 ACIN1Q9UKV3 1341 aaKnown RBP21.77■■□□□ 1.08
DDX49-201ENST00000247003 PRG4Q92954 1404 aaPredicted RBP21.77■■□□□ 1.08
DDX49-201ENST00000247003 MIER1Q8N108 512 aa21.77■■□□□ 1.08
DDX49-201ENST00000247003 RRP7BPQ9NSQ0 103 aa21.77■■□□□ 1.08
DDX49-201ENST00000247003 TONSLQ96HA7 1378 aa21.75■■□□□ 1.07
DDX49-201ENST00000247003 ROCK1Q13464 1354 aa21.75■■□□□ 1.07
DDX49-201ENST00000247003 KIF14Q15058 1648 aa21.74■■□□□ 1.07
DDX49-201ENST00000247003 CAMSAP2Q08AD1 1489 aa21.72■■□□□ 1.07
DDX49-201ENST00000247003 ABCC5O15440 1437 aa21.7■■□□□ 1.06
DDX49-201ENST00000247003 CFDP1Q9UEE9 299 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms