RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
NIN-201ENST00000245441 MYO15BQ96JP2 1530 aa15.17■□□□□ 0.02
NIN-201ENST00000245441 ANP32EQ9BTT0 268 aa15.17■□□□□ 0.02
NIN-201ENST00000245441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.022e-6■■■□□ 16.6
NIN-201ENST00000245441 ARXQ96QS3 562 aa15.14■□□□□ 0.01
NIN-201ENST00000245441 NPM1P06748 294 aaKnown RBP eCLIP15.13■□□□□ 0.01
NIN-201ENST00000245441 KDM2AQ9Y2K7 1162 aa15.13■□□□□ 0.01
NIN-201ENST00000245441 IRX6P78412 446 aaPredicted RBP15.11■□□□□ 0.01
NIN-201ENST00000245441 CEP164Q9UPV0 1460 aa15.09■□□□□ 0.01
NIN-201ENST00000245441 NACADO15069 1562 aa15.08■□□□□ 0.01
NIN-201ENST00000245441 GOLGA6L22H0YM25 854 aa15.08■□□□□ 0
NIN-201ENST00000245441 TRIM44Q96DX7 344 aaPredicted RBP15.08■□□□□ 0
NIN-201ENST00000245441 HIRIP3Q9BW71 556 aaPredicted RBP15.06■□□□□ 0
NIN-201ENST00000245441 CDCA8Q53HL2 280 aa15.03■□□□□ -0
NIN-201ENST00000245441 RRP7BPQ9NSQ0 103 aa15.03■□□□□ -0
NIN-201ENST00000245441 WRNQ14191 1432 aaPredicted RBP eCLIP15.03■□□□□ -0
NIN-201ENST00000245441 NCLP19338 710 aaKnown RBP15.02■□□□□ -0
NIN-201ENST00000245441 KIF27Q86VH2 1401 aa15.02□□□□□ -0.01
NIN-201ENST00000245441 BAZ1BQ9UIG0 1483 aaKnown RBP15□□□□□ -0.01
NIN-201ENST00000245441 CHMP7Q8WUX9 453 aaPredicted RBP15□□□□□ -0.01
NIN-201ENST00000245441 TNIKQ9UKE5 1360 aa15□□□□□ -0.01
NIN-201ENST00000245441 KNSTRNQ9Y448 316 aa14.99□□□□□ -0.01
NIN-201ENST00000245441 CASC1Q6TDU7 716 aa14.97□□□□□ -0.01
NIN-201ENST00000245441 CFAP53Q96M91 514 aa14.97□□□□□ -0.01
NIN-201ENST00000245441 PPM1GO15355 546 aaPredicted RBP14.96□□□□□ -0.01
NIN-201ENST00000245441 FTSJ3Q8IY81 847 aaKnown RBP14.96□□□□□ -0.01
NIN-201ENST00000245441 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
NIN-201ENST00000245441 SUPT16HQ9Y5B9 1047 aaKnown RBP14.96□□□□□ -0.01
NIN-201ENST00000245441 CDK11BP21127 795 aaKnown RBP14.96□□□□□ -0.02
NIN-201ENST00000245441 ERICH6BQ5W0A0 696 aa14.94□□□□□ -0.02
NIN-201ENST00000245441 FHAD1B1AJZ9 1412 aa14.93□□□□□ -0.02
NIN-201ENST00000245441 TNNT2P45379 298 aaPredicted RBP14.93□□□□□ -0.02
NIN-201ENST00000245441 PPP4R2Q9NY27 417 aa14.92□□□□□ -0.02
NIN-201ENST00000245441 PLEKHD1A6NEE1 506 aa14.91□□□□□ -0.02
NIN-201ENST00000245441 PLPPR3Q6T4P5 718 aa14.91□□□□□ -0.02
NIN-201ENST00000245441 ZRSR1Q15695 479 aaKnown RBP14.9□□□□□ -0.02
NIN-201ENST00000245441 CARD11Q9BXL7 1154 aa14.89□□□□□ -0.03
NIN-201ENST00000245441 PPP1R15AO75807 674 aaPredicted RBP14.88□□□□□ -0.03
NIN-201ENST00000245441 PTMAP06454 111 aaKnown RBP14.88□□□□□ -0.03
NIN-201ENST00000245441 CFDP1Q9UEE9 299 aaPredicted RBP14.88□□□□□ -0.03
NIN-201ENST00000245441 NOP58Q9Y2X3 529 aaKnown RBP14.87□□□□□ -0.03
NIN-201ENST00000245441 CCNB3Q8WWL7 1395 aa14.87□□□□□ -0.03
NIN-201ENST00000245441 CHMP4BQ9H444 224 aaKnown RBP14.87□□□□□ -0.03
NIN-201ENST00000245441 RGL3Q3MIN7 710 aa14.86□□□□□ -0.03
NIN-201ENST00000245441 DNTTIP2Q5QJE6 756 aaKnown RBP14.83□□□□□ -0.03
NIN-201ENST00000245441 MS4A1P11836 297 aa14.83□□□□□ -0.04
NIN-201ENST00000245441 MAPK8IP3Q9UPT6 1336 aa14.83□□□□□ -0.04
NIN-201ENST00000245441 C14orf37Q86TY3 774 aa14.8□□□□□ -0.04
NIN-201ENST00000245441 NUDCQ9Y266 331 aa14.8□□□□□ -0.04
NIN-201ENST00000245441 TIMELESSQ9UNS1 1208 aa14.8□□□□□ -0.04
NIN-201ENST00000245441 KCNH8Q96L42 1107 aa14.79□□□□□ -0.04
NIN-201ENST00000245441 RGS3P49796 1198 aa14.78□□□□□ -0.04
NIN-201ENST00000245441 LAS1LQ9Y4W2 734 aaKnown RBP14.78□□□□□ -0.04
NIN-201ENST00000245441 ARHGAP35Q9NRY4 1499 aa14.77□□□□□ -0.05
NIN-201ENST00000245441 PNNQ9H307 717 aaKnown RBP14.77□□□□□ -0.05
NIN-201ENST00000245441 NAP1L5Q96NT1 182 aaPredicted RBP14.76□□□□□ -0.05
NIN-201ENST00000245441 CCER2I3L3R5 266 aa14.76□□□□□ -0.05
NIN-201ENST00000245441 HSP90AB1P08238 724 aaKnown RBP14.75□□□□□ -0.05
NIN-201ENST00000245441 GOLGA6L6A8MZA4 724 aa14.74□□□□□ -0.05
NIN-201ENST00000245441 A0A0G2JS52 829 aa14.74□□□□□ -0.05
NIN-201ENST00000245441 NEUROD2Q15784 382 aa14.74□□□□□ -0.05
NIN-201ENST00000245441 FRAT1Q92837 279 aaPredicted RBP14.74□□□□□ -0.05
NIN-201ENST00000245441 VPS8Q8N3P4 1428 aa14.73□□□□□ -0.05
NIN-201ENST00000245441 SIN3AQ96ST3 1273 aa14.73□□□□□ -0.05
NIN-201ENST00000245441 B4GALNT3Q6L9W6 998 aa14.73□□□□□ -0.05
NIN-201ENST00000245441 SETD5Q9C0A6 1442 aa14.72□□□□□ -0.05
NIN-201ENST00000245441 ZBTB7CA1YPR0 619 aa14.72□□□□□ -0.05
NIN-201ENST00000245441 SENP3-EIF4A1A0A087X0R7 540 aa14.72□□□□□ -0.05
NIN-201ENST00000245441 EIF4G1Q04637 1599 aaKnown RBP14.72□□□□□ -0.05
NIN-201ENST00000245441 NRDCO43847 1150 aa14.72□□□□□ -0.05
NIN-201ENST00000245441 HSCBQ8IWL3 235 aa14.71□□□□□ -0.05
NIN-201ENST00000245441 TMF1P82094 1093 aa14.7□□□□□ -0.06
NIN-201ENST00000245441 CC2D1BQ5T0F9 858 aaKnown RBP14.7□□□□□ -0.06
NIN-201ENST00000245441 KANK1Q14678 1352 aa14.69□□□□□ -0.06
NIN-201ENST00000245441 CFAP44Q96MT7 982 aa14.69□□□□□ -0.06
NIN-201ENST00000245441 SENP3Q9H4L4 574 aaPredicted RBP14.69□□□□□ -0.06
NIN-201ENST00000245441 CHAF1AQ13111 956 aaPredicted RBP14.69□□□□□ -0.06
NIN-201ENST00000245441 L1TD1Q5T7N2 865 aaKnown RBP14.69□□□□□ -0.06
NIN-201ENST00000245441 POGKQ9P215 609 aa14.68□□□□□ -0.06
NIN-201ENST00000245441 ABCC8Q09428 1581 aa14.67□□□□□ -0.06
NIN-201ENST00000245441 FGD1P98174 961 aa14.66□□□□□ -0.06
NIN-201ENST00000245441 ERCC6Q03468 1493 aa14.66□□□□□ -0.06
NIN-201ENST00000245441 RTN4Q9NQC3 1192 aaKnown RBP14.65□□□□□ -0.06
NIN-201ENST00000245441 KTN1Q86UP2 1357 aaKnown RBP14.65□□□□□ -0.06
NIN-201ENST00000245441 DCAF11Q8TEB1 546 aa14.65□□□□□ -0.06
NIN-201ENST00000245441 CUX2O14529 1486 aa14.65□□□□□ -0.06
NIN-201ENST00000245441 KCNJ4P48050 445 aa14.64□□□□□ -0.07
NIN-201ENST00000245441 TPRNQ4KMQ1 711 aa14.64□□□□□ -0.07
NIN-201ENST00000245441 OS9Q13438 667 aaPredicted RBP14.64□□□□□ -0.07
NIN-201ENST00000245441 MSNP26038 577 aaKnown RBP14.64□□□□□ -0.07
NIN-201ENST00000245441 HAP1P54257 671 aaPredicted RBP14.63□□□□□ -0.07
NIN-201ENST00000245441 SMARCA2P51531 1590 aa14.63□□□□□ -0.07
NIN-201ENST00000245441 CARMIL1Q5VZK9 1371 aa14.63□□□□□ -0.07
NIN-201ENST00000245441 U2SURPO15042 1029 aaKnown RBP14.63□□□□□ -0.07
NIN-201ENST00000245441 MCCP23508 829 aa14.63□□□□□ -0.07
NIN-201ENST00000245441 PLCB2Q00722 1185 aa14.63□□□□□ -0.07
NIN-201ENST00000245441 PLEKHG5O94827 1062 aa14.63□□□□□ -0.07
NIN-201ENST00000245441 RBM19Q9Y4C8 960 aaKnown RBP14.63□□□□□ -0.07
NIN-201ENST00000245441 SOGA1O94964 1423 aa14.62□□□□□ -0.07
NIN-201ENST00000245441 GOLGA6L4A6NEF3 574 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms