RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 ARHGAP35Q9NRY4 1499 aa28.08■■■□□ 2.09
KLHDC3-201ENST00000244670 FHAD1B1AJZ9 1412 aa28.07■■■□□ 2.08
KLHDC3-201ENST00000244670 SNAPC4Q5SXM2 1469 aa28.03■■■□□ 2.08
KLHDC3-201ENST00000244670 TTBK1Q5TCY1 1321 aaPredicted RBP27.98■■■□□ 2.07
KLHDC3-201ENST00000244670 P3H3Q8IVL6 736 aa27.9■■■□□ 2.06
KLHDC3-201ENST00000244670 MAGI1Q96QZ7 1491 aaPredicted RBP27.89■■■□□ 2.06
KLHDC3-201ENST00000244670 EFCAB5A4FU69 1503 aa27.85■■■□□ 2.05
KLHDC3-201ENST00000244670 APLP2Q06481 763 aa27.84■■■□□ 2.05
KLHDC3-201ENST00000244670 GRIN2AQ12879 1464 aa27.84■■■□□ 2.05
KLHDC3-201ENST00000244670 FHOD3Q2V2M9 1422 aa27.84■■■□□ 2.05
KLHDC3-201ENST00000244670 SYNJ2O15056 1496 aa27.81■■■□□ 2.04
KLHDC3-201ENST00000244670 IQGAP2Q13576 1575 aa27.8■■■□□ 2.04
KLHDC3-201ENST00000244670 CHMP7Q8WUX9 453 aaPredicted RBP27.79■■■□□ 2.04
KLHDC3-201ENST00000244670 FBLN2P98095 1184 aa27.79■■■□□ 2.04
KLHDC3-201ENST00000244670 SAMD9Q5K651 1589 aa27.78■■■□□ 2.04
KLHDC3-201ENST00000244670 HRCP23327 699 aa27.74■■■□□ 2.03
KLHDC3-201ENST00000244670 PCF11O94913 1555 aaKnown RBP27.7■■■□□ 2.02
KLHDC3-201ENST00000244670 CEP170Q5SW79 1584 aa27.7■■■□□ 2.02
KLHDC3-201ENST00000244670 KIAA0586Q9BVV6 1533 aa27.69■■■□□ 2.02
KLHDC3-201ENST00000244670 KANK4Q5T7N3 995 aaPredicted RBP27.63■■■□□ 2.01
KLHDC3-201ENST00000244670 UGGT2Q9NYU1 1516 aa27.62■■■□□ 2.01
KLHDC3-201ENST00000244670 FMN1Q68DA7 1419 aa27.62■■■□□ 2.01
KLHDC3-201ENST00000244670 ATP1B4Q9UN42 357 aaPredicted RBP27.61■■■□□ 2.01
KLHDC3-201ENST00000244670 NUP160Q12769 1436 aa27.6■■■□□ 2.01
KLHDC3-201ENST00000244670 CHD1O14646 1710 aa27.58■■■□□ 2.01
KLHDC3-201ENST00000244670 TIAM1Q13009 1591 aa27.58■■■□□ 2.01
KLHDC3-201ENST00000244670 FYCO1Q9BQS8 1478 aa27.58■■■□□ 2.01
KLHDC3-201ENST00000244670 CASKIN1Q8WXD9 1431 aa27.57■■■□□ 2
KLHDC3-201ENST00000244670 KIAA0556O60303 1618 aa27.53■■■□□ 2
KLHDC3-201ENST00000244670 CFAP43Q8NDM7 1665 aa27.52■■■□□ 2
KLHDC3-201ENST00000244670 DISP1Q96F81 1524 aa27.52■■■□□ 2
KLHDC3-201ENST00000244670 MAP3K1Q13233 1512 aa27.52■■■□□ 2
KLHDC3-201ENST00000244670 LRRIQ1Q96JM4 1722 aa27.46■■□□□ 1.99
KLHDC3-201ENST00000244670 LRRC9Q6ZRR7 1453 aa27.44■■□□□ 1.98
KLHDC3-201ENST00000244670 JPH4Q96JJ6 628 aa27.43■■□□□ 1.98
KLHDC3-201ENST00000244670 HECW1Q76N89 1606 aa27.36■■□□□ 1.97
KLHDC3-201ENST00000244670 CARMIL2Q6F5E8 1435 aa27.34■■□□□ 1.97
KLHDC3-201ENST00000244670 ARID3CA6NKF2 412 aa27.28■■□□□ 1.96
KLHDC3-201ENST00000244670 CCDC18Q5T9S5 1454 aa27.27■■□□□ 1.96
KLHDC3-201ENST00000244670 RAPGEF6Q8TEU7 1601 aa27.27■■□□□ 1.96
KLHDC3-201ENST00000244670 PRG4Q92954 1404 aaPredicted RBP27.27■■□□□ 1.96
KLHDC3-201ENST00000244670 HNRNPUL2Q1KMD3 747 aaKnown RBP27.26■■□□□ 1.95
KLHDC3-201ENST00000244670 EPRSP07814 1512 aaKnown RBP27.26■■□□□ 1.95
KLHDC3-201ENST00000244670 MTUS2Q5JR59 1369 aa27.25■■□□□ 1.95
KLHDC3-201ENST00000244670 CDK13Q14004 1512 aaKnown RBP27.25■■□□□ 1.95
KLHDC3-201ENST00000244670 RRBP1Q9P2E9 1410 aaKnown RBP27.25■■□□□ 1.95
KLHDC3-201ENST00000244670 PHLDB1Q86UU1 1377 aa27.23■■□□□ 1.95
KLHDC3-201ENST00000244670 SHROOM2Q13796 1616 aa27.23■■□□□ 1.95
KLHDC3-201ENST00000244670 PLB1Q6P1J6 1458 aa27.21■■□□□ 1.95
KLHDC3-201ENST00000244670 NUP153P49790 1475 aaKnown RBP27.2■■□□□ 1.94
KLHDC3-201ENST00000244670 MAGI3Q5TCQ9 1506 aa27.2■■□□□ 1.94
KLHDC3-201ENST00000244670 CLASP1Q7Z460 1538 aa27.18■■□□□ 1.94
KLHDC3-201ENST00000244670 CCNB3Q8WWL7 1395 aa27.18■■□□□ 1.94
KLHDC3-201ENST00000244670 EHBP1L1Q8N3D4 1523 aa27.18■■□□□ 1.94
KLHDC3-201ENST00000244670 ERCC6L2Q5T890 1561 aa27.14■■□□□ 1.93
KLHDC3-201ENST00000244670 SUPT6HQ7KZ85 1726 aaKnown RBP27.13■■□□□ 1.93
KLHDC3-201ENST00000244670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.12■■□□□ 1.93
KLHDC3-201ENST00000244670 NCOA2Q15596 1464 aa27.11■■□□□ 1.93
KLHDC3-201ENST00000244670 ZEB1P37275 1124 aaPredicted RBP27.1■■□□□ 1.93
KLHDC3-201ENST00000244670 ABCA8O94911 1581 aa27.09■■□□□ 1.93
KLHDC3-201ENST00000244670 PTPRGP23470 1445 aa27.09■■□□□ 1.93
KLHDC3-201ENST00000244670 ITGAEP38570 1179 aa27.05■■□□□ 1.92
KLHDC3-201ENST00000244670 FAM50AQ14320 339 aaKnown RBP27.04■■□□□ 1.92
KLHDC3-201ENST00000244670 ARHGEF11O15085 1522 aa27.01■■□□□ 1.91
KLHDC3-201ENST00000244670 FGD6Q6ZV73 1430 aa27.01■■□□□ 1.91
KLHDC3-201ENST00000244670 CCER1Q8TC90 406 aaPredicted RBP26.99■■□□□ 1.91
KLHDC3-201ENST00000244670 MYOM3Q5VTT5 1437 aa26.98■■□□□ 1.91
KLHDC3-201ENST00000244670 CDK11AQ9UQ88 783 aaPredicted RBP26.97■■□□□ 1.91
KLHDC3-201ENST00000244670 ATP10BO94823 1461 aa26.94■■□□□ 1.9
KLHDC3-201ENST00000244670 UACAQ9BZF9 1416 aa26.93■■□□□ 1.9
KLHDC3-201ENST00000244670 TROQ12816 1431 aaPredicted RBP26.91■■□□□ 1.9
KLHDC3-201ENST00000244670 OSCARQ8IYS5 282 aa26.9■■□□□ 1.9
KLHDC3-201ENST00000244670 PTPN23Q9H3S7 1636 aa26.88■■□□□ 1.89
KLHDC3-201ENST00000244670 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.87■■□□□ 1.89
KLHDC3-201ENST00000244670 KIF14Q15058 1648 aa26.86■■□□□ 1.89
KLHDC3-201ENST00000244670 ABCC2Q92887 1545 aa26.85■■□□□ 1.89
KLHDC3-201ENST00000244670 ADCY10Q96PN6 1610 aa26.84■■□□□ 1.89
KLHDC3-201ENST00000244670 PLEKHD1A6NEE1 506 aa26.82■■□□□ 1.88
KLHDC3-201ENST00000244670 TCOF1Q13428 1488 aaKnown RBP26.78■■□□□ 1.88
KLHDC3-201ENST00000244670 MIA2Q96PC5 1412 aa26.77■■□□□ 1.88
KLHDC3-201ENST00000244670 PTPRKQ15262 1439 aa26.73■■□□□ 1.87
KLHDC3-201ENST00000244670 ITSN2Q9NZM3 1697 aa26.73■■□□□ 1.87
KLHDC3-201ENST00000244670 UHRF1BP1LA0JNW5 1464 aa26.71■■□□□ 1.87
KLHDC3-201ENST00000244670 RAB3GAP2Q9H2M9 1393 aa26.71■■□□□ 1.87
KLHDC3-201ENST00000244670 ZCCHC11Q5TAX3 1644 aaKnown RBP26.71■■□□□ 1.87
KLHDC3-201ENST00000244670 SETD5Q9C0A6 1442 aa26.7■■□□□ 1.87
KLHDC3-201ENST00000244670 GPATCH8Q9UKJ3 1502 aaKnown RBP26.7■■□□□ 1.86
KLHDC3-201ENST00000244670 ABCC10Q5T3U5 1492 aa26.68■■□□□ 1.86
KLHDC3-201ENST00000244670 ZNF644Q9H582 1327 aaPredicted RBP26.67■■□□□ 1.86
KLHDC3-201ENST00000244670 CDC42BPAQ5VT25 1732 aa26.67■■□□□ 1.86
KLHDC3-201ENST00000244670 CFDP1Q9UEE9 299 aaPredicted RBP26.65■■□□□ 1.86
KLHDC3-201ENST00000244670 KDM5BQ9UGL1 1544 aa26.65■■□□□ 1.86
KLHDC3-201ENST00000244670 DHX57Q6P158 1386 aaKnown RBP26.64■■□□□ 1.86
KLHDC3-201ENST00000244670 ZNF777Q9ULD5 760 aaPredicted RBP26.61■■□□□ 1.85
KLHDC3-201ENST00000244670 CAMSAP2Q08AD1 1489 aa26.61■■□□□ 1.85
KLHDC3-201ENST00000244670 CHIC2Q9UKJ5 165 aa26.61■■□□□ 1.85
KLHDC3-201ENST00000244670 DNMT1P26358 1616 aaKnown RBP26.58■■□□□ 1.85
KLHDC3-201ENST00000244670 TTC37Q6PGP7 1564 aa26.57■■□□□ 1.84
KLHDC3-201ENST00000244670 KCNH8Q96L42 1107 aa26.57■■□□□ 1.84
KLHDC3-201ENST00000244670 HFM1A2PYH4 1435 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms